BLASTX nr result

ID: Panax21_contig00023306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023306
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278586.2| PREDICTED: WD repeat-containing protein 26 [...    70   2e-10
emb|CAN80620.1| hypothetical protein VITISV_007853 [Vitis vinifera]    69   3e-10
ref|XP_004162570.1| PREDICTED: WD repeat-containing protein 26-l...    66   3e-09
ref|XP_004149516.1| PREDICTED: WD repeat-containing protein 26-l...    66   3e-09
ref|XP_002306758.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002278586.2| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
          Length = 267

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/56 (60%), Positives = 45/56 (80%)
 Frame = +2

Query: 194 MGGVEDDEPPSKRVKVSSKQLRGLANGASVREPASCSLNFSMARPLSSQGDDEIVG 361
           MGGV+DDEPPSKR+K+SS +LRGL+NG+S+ EP   SL  SMA  L S+ ++E+VG
Sbjct: 1   MGGVDDDEPPSKRMKLSSGELRGLSNGSSLTEPVDGSLRDSMACSLPSEENEEMVG 56


>emb|CAN80620.1| hypothetical protein VITISV_007853 [Vitis vinifera]
          Length = 310

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/56 (60%), Positives = 45/56 (80%)
 Frame = +2

Query: 194 MGGVEDDEPPSKRVKVSSKQLRGLANGASVREPASCSLNFSMARPLSSQGDDEIVG 361
           MGGV+DDEPPSKR+K+SS +LRGL+NG+S+ EP   SL  SMA  L S+ ++E+VG
Sbjct: 1   MGGVDDDEPPSKRMKLSSGELRGLSNGSSLTEPVXGSLRDSMACSLPSEENEEMVG 56


>ref|XP_004162570.1| PREDICTED: WD repeat-containing protein 26-like [Cucumis sativus]
          Length = 591

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/57 (57%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = +2

Query: 194 MGGVEDDEPPSKRVKVSSKQLRGLANGASVREPASCSLNFSMARPLSSQGDD-EIVG 361
           MGG+ED+EP SKR+KVSS++L+GL+NG SV EP   S    MARPL S+GD  +++G
Sbjct: 1   MGGLEDEEPASKRMKVSSEKLKGLSNGLSVVEPLGGSSRDLMARPLQSEGDSGDVIG 57


>ref|XP_004149516.1| PREDICTED: WD repeat-containing protein 26-like [Cucumis sativus]
          Length = 591

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/57 (57%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = +2

Query: 194 MGGVEDDEPPSKRVKVSSKQLRGLANGASVREPASCSLNFSMARPLSSQGDD-EIVG 361
           MGG+ED+EP SKR+KVSS++L+GL+NG SV EP   S    MARPL S+GD  +++G
Sbjct: 1   MGGLEDEEPASKRMKVSSEKLKGLSNGLSVVEPLGGSSRDLMARPLQSEGDSGDVIG 57


>ref|XP_002306758.1| predicted protein [Populus trichocarpa] gi|222856207|gb|EEE93754.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/56 (55%), Positives = 43/56 (76%)
 Frame = +2

Query: 194 MGGVEDDEPPSKRVKVSSKQLRGLANGASVREPASCSLNFSMARPLSSQGDDEIVG 361
           MGGV+DDEP  KR+K++S +L GL+NG+S+ EP   S    MARPL S+GD+E++G
Sbjct: 1   MGGVDDDEPALKRLKLASGRLTGLSNGSSLTEPIVGSSRDLMARPLQSEGDEEVLG 56


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