BLASTX nr result

ID: Panax21_contig00023300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023300
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525701.1| membrin, putative [Ricinus communis] gi|2235...    92   3e-17
ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|29...    90   2e-16
ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus]       88   8e-16
ref|XP_002319183.1| predicted protein [Populus trichocarpa] gi|1...    88   8e-16
ref|NP_001242121.1| uncharacterized protein LOC100803902 [Glycin...    79   3e-13

>ref|XP_002525701.1| membrin, putative [Ricinus communis] gi|223535001|gb|EEF36684.1|
           membrin, putative [Ricinus communis]
          Length = 229

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/71 (63%), Positives = 61/71 (85%), Gaps = 2/71 (2%)
 Frame = -2

Query: 454 AMAVEG--GNLSELYHTSKRLLLKSRDGLERLERLEFSSSTTTVDSPELSYAVQRDIAQI 281
           AMA+EG  G LSE++ +SK+ LL++RDG+ERLERLE S+S   +DSPELS+AV++DI+QI
Sbjct: 2   AMAIEGEGGTLSEIFQSSKKALLRARDGIERLERLENSTSNGGLDSPELSFAVKKDISQI 61

Query: 280 QSLCADMDRHW 248
           QSLCA++DR W
Sbjct: 62  QSLCAELDRLW 72


>ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|296085896|emb|CBI31220.3|
           unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/68 (67%), Positives = 57/68 (83%), Gaps = 2/68 (2%)
 Frame = -2

Query: 445 VEGGN--LSELYHTSKRLLLKSRDGLERLERLEFSSSTTTVDSPELSYAVQRDIAQIQSL 272
           +EGG    SE+Y  SK+LLL++RDGLERLERLEFSSS   VDSPEL++AV++DI+QIQSL
Sbjct: 1   MEGGGTTFSEIYQNSKKLLLRTRDGLERLERLEFSSSNP-VDSPELAFAVKKDISQIQSL 59

Query: 271 CADMDRHW 248
           C +MDR W
Sbjct: 60  CVEMDRLW 67


>ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus]
          Length = 228

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/64 (62%), Positives = 57/64 (89%)
 Frame = -2

Query: 439 GGNLSELYHTSKRLLLKSRDGLERLERLEFSSSTTTVDSPELSYAVQRDIAQIQSLCADM 260
           GG LSE+Y ++KRLLL++RDGLE+LERLE+S++ + +DSPELS+++++DI QIQSLC +M
Sbjct: 9   GGTLSEIYQSAKRLLLRTRDGLEKLERLEYSAA-SGMDSPELSFSIKKDITQIQSLCVEM 67

Query: 259 DRHW 248
           DR W
Sbjct: 68  DRLW 71


>ref|XP_002319183.1| predicted protein [Populus trichocarpa] gi|118486425|gb|ABK95052.1|
           unknown [Populus trichocarpa]
           gi|222857559|gb|EEE95106.1| predicted protein [Populus
           trichocarpa]
          Length = 225

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/64 (60%), Positives = 56/64 (87%)
 Frame = -2

Query: 439 GGNLSELYHTSKRLLLKSRDGLERLERLEFSSSTTTVDSPELSYAVQRDIAQIQSLCADM 260
           GG LSE+Y ++K+LL++++DG+ERLERLE S+S+  +DSPELS+ V++DI+Q+ SLCADM
Sbjct: 5   GGTLSEIYQSAKKLLMRAQDGIERLERLENSTSSGGLDSPELSFVVKKDISQVLSLCADM 64

Query: 259 DRHW 248
           DR W
Sbjct: 65  DRLW 68


>ref|NP_001242121.1| uncharacterized protein LOC100803902 [Glycine max]
           gi|255636977|gb|ACU18821.1| unknown [Glycine max]
          Length = 228

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
 Frame = -2

Query: 439 GGNLSELYHTSKRLLLKSRDGLERLERLEFSSSTTTVDS---PELSYAVQRDIAQIQSLC 269
           GG LSE++ ++K+LLL+SRDGLERLERLE+S++     S    ELS+AV++DI QIQ+LC
Sbjct: 5   GGTLSEIHQSAKKLLLRSRDGLERLERLEYSAAAGAAFSGADSELSFAVKKDITQIQTLC 64

Query: 268 ADMDRHW 248
            +MDR W
Sbjct: 65  VEMDRLW 71


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