BLASTX nr result
ID: Panax21_contig00023281
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00023281
(434 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi... 165 8e-42
emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera] 164 2e-41
ref|XP_002510620.1| pentatricopeptide repeat-containing protein,... 156 6e-40
ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containi... 146 4e-35
ref|XP_003610363.1| Pentatricopeptide repeat-containing protein ... 143 2e-34
>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
protein product [Vitis vinifera]
Length = 703
Score = 165 bits (418), Expect(2) = 8e-42
Identities = 85/123 (69%), Positives = 99/123 (80%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKLG 180
ISGYA Q+LA+ AL LF++M EEEG NEFVFTSVLSA T E + GKQ+H I +K G
Sbjct: 181 ISGYASQKLAAEALGLFRLMR-REEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 239
Query: 181 ILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLFS 360
+LS+VSVGNA+VTMY KCGSLD A Q FE +SDKNSITW+AMITG+AQSGD +KAL LFS
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFS 299
Query: 361 KMH 369
MH
Sbjct: 300 SMH 302
Score = 30.0 bits (66), Expect(2) = 8e-42
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 372 AGMRASGSTLVGVLNACSDSG 434
+G+R S T VGV+NACSD G
Sbjct: 304 SGIRPSEFTFVGVINACSDLG 324
Score = 72.0 bits (175), Expect = 5e-11
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGV--NEFVFTSVLSAFTFHEFIGIGKQLHGIVIK 174
I+GYA + AL+LF M G+ +EF F V++A + GKQ+H ++K
Sbjct: 282 ITGYAQSGDSDKALKLFSSM---HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLK 338
Query: 175 LGILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTL 354
LG S + V A+V MY KC S+ A + F+ + + + W +MI G+ Q+G+ E AL+L
Sbjct: 339 LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSL 398
Query: 355 FSKM 366
+ +M
Sbjct: 399 YGRM 402
Score = 70.5 bits (171), Expect = 1e-10
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGV--NEFVFTSVLSAFTFHEFIGIGKQLHGIVIK 174
I GY AL L+ M E EG+ NE SVL A + + GKQ+H +K
Sbjct: 383 IGGYVQNGENEDALSLYGRM---EMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK 439
Query: 175 LGILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTL 354
G V +G+A+ TMY KCG L +F ++ I+W AMI+G +Q+G ++AL L
Sbjct: 440 YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALEL 499
Query: 355 FSKM 366
F +M
Sbjct: 500 FEEM 503
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/113 (31%), Positives = 59/113 (52%)
Frame = +1
Query: 28 ASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKLGILSVVSVGN 207
+S+ +ELF+ M E N F V +A + G+ H + IK+ V VG+
Sbjct: 89 SSHVMELFQRMR-AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGS 147
Query: 208 AIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLFSKM 366
+++ MY K G A ++F+ ++NS++WA MI+G+A +AL LF M
Sbjct: 148 SLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLM 200
>emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 164 bits (414), Expect(2) = 2e-41
Identities = 85/123 (69%), Positives = 98/123 (79%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKLG 180
ISGYA Q+LA+ AL LF++M EEEG NEFVFTSVLSA T E + GKQ+H I +K G
Sbjct: 181 ISGYASQKLAAEALGLFRLMR-REEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 239
Query: 181 ILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLFS 360
+LS+VSVGNA+VTMY KCGSLD A Q FE +SDKNSITW+AMITG AQSGD +KAL LFS
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFS 299
Query: 361 KMH 369
MH
Sbjct: 300 SMH 302
Score = 30.0 bits (66), Expect(2) = 2e-41
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 372 AGMRASGSTLVGVLNACSDSG 434
+G+R S T VGV+NACSD G
Sbjct: 304 SGIRPSEFTFVGVINACSDLG 324
Score = 70.5 bits (171), Expect = 1e-10
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGV--NEFVFTSVLSAFTFHEFIGIGKQLHGIVIK 174
I GY AL L+ M E EG+ NE SVL A + + GKQ+H +K
Sbjct: 383 IGGYVQNGENEDALSLYGRM---EMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK 439
Query: 175 LGILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTL 354
G V +G+A+ TMY KCG L +F ++ I+W AMI+G +Q+G ++AL L
Sbjct: 440 YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALEL 499
Query: 355 FSKM 366
F +M
Sbjct: 500 FEEM 503
Score = 68.9 bits (167), Expect = 4e-10
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGV--NEFVFTSVLSAFTFHEFIGIGKQLHGIVIK 174
I+G A + AL+LF M G+ +EF F V++A + GKQ+H ++K
Sbjct: 282 ITGXAQSGDSDKALKLFSSM---HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLK 338
Query: 175 LGILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTL 354
LG S + V A+V MY KC S+ A + F+ + + + W +MI G+ Q+G+ E AL+L
Sbjct: 339 LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSL 398
Query: 355 FSKM 366
+ +M
Sbjct: 399 YGRM 402
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/113 (31%), Positives = 59/113 (52%)
Frame = +1
Query: 28 ASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKLGILSVVSVGN 207
+S+ +ELF+ M E N F V +A + G+ H + IK+ V VG+
Sbjct: 89 SSHVMELFQRMR-AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGS 147
Query: 208 AIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLFSKM 366
+++ MY K G A ++F+ ++NS++WA MI+G+A +AL LF M
Sbjct: 148 SLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLM 200
>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 708
Score = 156 bits (395), Expect(2) = 6e-40
Identities = 78/123 (63%), Positives = 98/123 (79%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKLG 180
ISGYAIQRLA A E+F++M EEE+ VNEF FTSVLSA EF+ GKQ+H + +K G
Sbjct: 184 ISGYAIQRLAGEAFEVFELMRREEED-VNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTG 242
Query: 181 ILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLFS 360
+L +S+ NA+VTMY KCGSLD + Q+FE+++DKNSITW+AMITG+AQSGD KAL LFS
Sbjct: 243 LLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFS 302
Query: 361 KMH 369
+MH
Sbjct: 303 RMH 305
Score = 32.7 bits (73), Expect(2) = 6e-40
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 369 FAGMRASGSTLVGVLNACSDS 431
FAG+ S TLVGVLNACSD+
Sbjct: 306 FAGINPSEFTLVGVLNACSDA 326
Score = 72.4 bits (176), Expect = 4e-11
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGV--NEFVFTSVLSAFTFHEFIGIGKQLHGIVIK 174
I+GY AL L+ M + EG+ NE SVL A + G+Q+H IK
Sbjct: 386 IAGYVQNGENEDALSLYCRM---QMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIK 442
Query: 175 LGILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTL 354
G+ V++G+A+ TMY KCG+L+ +F +++ I+W AMI+G +Q+G ++AL L
Sbjct: 443 YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALEL 502
Query: 355 FSKM 366
F +M
Sbjct: 503 FEEM 506
Score = 68.6 bits (166), Expect = 5e-10
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGVN--EFVFTSVLSAFTFHEFIGIGKQLHGIVIK 174
I+GYA + AL+LF M + G+N EF VL+A + + GKQ+H ++K
Sbjct: 285 ITGYAQSGDSHKALKLFSRMHFA---GINPSEFTLVGVLNACSDACAVEEGKQVHNYLLK 341
Query: 175 LGILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTL 354
LG S + + A+V MY K G + A + F + + W +MI G+ Q+G+ E AL+L
Sbjct: 342 LGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSL 401
Query: 355 FSKM 366
+ +M
Sbjct: 402 YCRM 405
Score = 63.5 bits (153), Expect = 2e-08
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 ISGYAIQRL--ASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIK 174
I+GY+ Q +S+ +ELF+ M + N F+ + +A + I G+Q H + IK
Sbjct: 81 INGYSQQGPTGSSFVMELFQRMR-ADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIK 139
Query: 175 LGILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTL 354
+ V VG++++ MY K G L A ++F+ ++N +TWA MI+G+A +A +
Sbjct: 140 MACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEV 199
Query: 355 FSKM 366
F M
Sbjct: 200 FELM 203
>ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 146 bits (369), Expect(2) = 4e-35
Identities = 74/124 (59%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEE-EGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKL 177
ISGYA Q LA A ELFK+M EE+ + NEFVFTSVLSA T + + G+Q+H + +K
Sbjct: 189 ISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKN 248
Query: 178 GILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLF 357
G++ +VSV NA+VTMYVKCGSL+ A + FEL+ +KNSITW+AM+TGFAQ GD +KAL LF
Sbjct: 249 GLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLF 308
Query: 358 SKMH 369
MH
Sbjct: 309 YDMH 312
Score = 26.6 bits (57), Expect(2) = 4e-35
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 372 AGMRASGSTLVGVLNACSDS 431
+G S TLVGV+NACSD+
Sbjct: 314 SGELPSEFTLVGVINACSDA 333
Score = 72.4 bits (176), Expect = 4e-11
Identities = 45/122 (36%), Positives = 70/122 (57%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKLG 180
++G+A + AL+LF M + E +EF V++A + I G+Q+HG +KLG
Sbjct: 292 VTGFAQFGDSDKALKLF-YDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLG 350
Query: 181 ILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLFS 360
+ V +A+V MY KCGS+ A + FE + + W ++ITG+ Q+GD E AL L+
Sbjct: 351 YELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYG 410
Query: 361 KM 366
KM
Sbjct: 411 KM 412
Score = 69.7 bits (169), Expect = 2e-10
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGV--NEFVFTSVLSAFTFHEFIGIGKQLHGIVIK 174
I+GY AL L+ M + GV N+ SVL A + + GKQ+H +IK
Sbjct: 393 ITGYVQNGDYEGALNLYGKM---QLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIK 449
Query: 175 LGILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTL 354
+ +G+A+ MY KCGSLD +++F ++ I+W AMI+G +Q+G + L L
Sbjct: 450 YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLEL 509
Query: 355 FSKM 366
F KM
Sbjct: 510 FEKM 513
>ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 734
Score = 143 bits (361), Expect(2) = 2e-34
Identities = 72/123 (58%), Positives = 92/123 (74%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKLG 180
ISGYA +A A+E+F++M EEE NEF TSVLSA T F+ G+Q+H + IK G
Sbjct: 191 ISGYASSDIADKAVEVFELMR-REEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNG 249
Query: 181 ILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLFS 360
+L++VSV NA+VTMY KCGSLD A + FE + DKNSITW+AM+TG+AQ GD +KAL LF+
Sbjct: 250 LLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFN 309
Query: 361 KMH 369
KMH
Sbjct: 310 KMH 312
Score = 27.3 bits (59), Expect(2) = 2e-34
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 372 AGMRASGSTLVGVLNACSD 428
+G+ S TLVGV+NACSD
Sbjct: 314 SGVLPSEFTLVGVINACSD 332
Score = 77.4 bits (189), Expect = 1e-12
Identities = 47/122 (38%), Positives = 64/122 (52%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKLG 180
I+GY L L+ M E NE SVL A + + GKQ+H +IK G
Sbjct: 393 ITGYVQNGDYEGGLNLYGKMQMERVIP-NELTMASVLRACSSLAALDQGKQMHARIIKYG 451
Query: 181 ILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLFS 360
V +G+A+ MY KCGSLD + +F ++ I+W AMI+G +Q+G KAL LF
Sbjct: 452 FKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFE 511
Query: 361 KM 366
KM
Sbjct: 512 KM 513
Score = 73.6 bits (179), Expect = 2e-11
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 ISGYAIQRLASYALELFKMMMWEEEEGV--NEFVFTSVLSAFTFHEFIGIGKQLHGIVIK 174
++GYA + AL+LF M GV +EF V++A + + GKQ+H K
Sbjct: 292 VTGYAQGGDSDKALKLFNKM---HSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFK 348
Query: 175 LGILSVVSVGNAIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTL 354
LG + V +A+V MY KCGSL A + FE + + W ++ITG+ Q+GD E L L
Sbjct: 349 LGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNL 408
Query: 355 FSKM 366
+ KM
Sbjct: 409 YGKM 412
Score = 72.4 bits (176), Expect = 4e-11
Identities = 38/113 (33%), Positives = 63/113 (55%)
Frame = +1
Query: 28 ASYALELFKMMMWEEEEGVNEFVFTSVLSAFTFHEFIGIGKQLHGIVIKLGILSVVSVGN 207
+S+A+ LF+ MM N V SA + + GKQ H + +K G V VG+
Sbjct: 98 SSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGS 157
Query: 208 AIVTMYVKCGSLDYAFQLFELASDKNSITWAAMITGFAQSGDCEKALTLFSKM 366
+++ MY K G + A +LF+ ++N+++WA MI+G+A S +KA+ +F M
Sbjct: 158 SLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELM 210