BLASTX nr result

ID: Panax21_contig00023271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023271
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299797.1| predicted protein [Populus trichocarpa] gi|2...   363   2e-98
ref|XP_002266954.1| PREDICTED: pseudouridine-5'-phosphate glycos...   362   4e-98
ref|XP_004139051.1| PREDICTED: pseudouridine-5'-phosphate glycos...   358   5e-97
ref|XP_003534699.1| PREDICTED: pseudouridine-5'-phosphate glycos...   346   3e-93
ref|XP_003605427.1| Pseudouridine-5'-phosphate glycosidase [Medi...   345   6e-93

>ref|XP_002299797.1| predicted protein [Populus trichocarpa] gi|222847055|gb|EEE84602.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  363 bits (933), Expect = 2e-98
 Identities = 187/237 (78%), Positives = 206/237 (86%), Gaps = 4/237 (1%)
 Frame = +3

Query: 45  ASSAFSRIANLQRHFNPADSIRKGGNEN----VGVGLVKVSPDVSEALSRGKAVVALEST 212
           +SSA SR++NL RH +P  S  K         + VGL+K+SP+V+EALS G  VVALEST
Sbjct: 4   SSSALSRLSNLHRHLHPPQSNSKARYSQSFLFLSVGLLKLSPEVAEALSSGHPVVALEST 63

Query: 213 IISHGMPYPQNLETAKEVEAIVRKNGAEPATVAILDGIPCVGLNTEELERLATLGTKCQK 392
           IISHGMPYP+NL+TAKEVEAIVR+NGA PATVAILDG+PC+GL+T ELERLATLGTK QK
Sbjct: 64  IISHGMPYPKNLKTAKEVEAIVRENGAVPATVAILDGVPCIGLSTGELERLATLGTKAQK 123

Query: 393 TSRRDIAHVVATKGNGATTVSATMIFASMVGIPIFVTGGIGGVHRHGENTMDISSDLTEL 572
           T+RRDIAHVVA +GNGATTVSATM FASMVGI +FVTGGIGGVHRHGE TMDISSDLTEL
Sbjct: 124 TARRDIAHVVANRGNGATTVSATMFFASMVGIHVFVTGGIGGVHRHGEQTMDISSDLTEL 183

Query: 573 GRTPVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTGKSGCKAPSRVD 743
           GRTPVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFT +SGCK   RVD
Sbjct: 184 GRTPVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTERSGCKVHCRVD 240


>ref|XP_002266954.1| PREDICTED: pseudouridine-5'-phosphate glycosidase [Vitis vinifera]
           gi|296083913|emb|CBI24301.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  362 bits (929), Expect = 4e-98
 Identities = 187/234 (79%), Positives = 203/234 (86%)
 Frame = +3

Query: 42  MASSAFSRIANLQRHFNPADSIRKGGNENVGVGLVKVSPDVSEALSRGKAVVALESTIIS 221
           M SSA SR++N+ RH  P  S     +   G   VK+SP+VS ALS G+AVVALESTIIS
Sbjct: 1   MVSSALSRLSNINRHLKPTVSHSCDSDGATGTP-VKISPEVSNALSCGRAVVALESTIIS 59

Query: 222 HGMPYPQNLETAKEVEAIVRKNGAEPATVAILDGIPCVGLNTEELERLATLGTKCQKTSR 401
           HGMPYP+NLETAKEVEAIVR NGA PATVAILDGIPC+GL+ E+LERLA+LGTK QK +R
Sbjct: 60  HGMPYPRNLETAKEVEAIVRTNGAVPATVAILDGIPCIGLSIEQLERLASLGTKAQKAAR 119

Query: 402 RDIAHVVATKGNGATTVSATMIFASMVGIPIFVTGGIGGVHRHGENTMDISSDLTELGRT 581
           RDIAH+VAT+GNGATTVSATM FASMVGIP+FVTGGIGGVHRHGENTMDISSDLTELGRT
Sbjct: 120 RDIAHIVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGENTMDISSDLTELGRT 179

Query: 582 PVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTGKSGCKAPSRVD 743
           PVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFT KSG K   RVD
Sbjct: 180 PVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTEKSGSKVHCRVD 233


>ref|XP_004139051.1| PREDICTED: pseudouridine-5'-phosphate glycosidase-like [Cucumis
           sativus]
          Length = 343

 Score =  358 bits (920), Expect = 5e-97
 Identities = 187/239 (78%), Positives = 203/239 (84%), Gaps = 4/239 (1%)
 Frame = +3

Query: 39  AMASSAFSRIANLQRHFNPADSIRK----GGNENVGVGLVKVSPDVSEALSRGKAVVALE 206
           A +SSA SRI+NL RHF+  +S  +    G  +  G GL+K+S +VS A+SRG  VVALE
Sbjct: 2   ASSSSALSRISNLSRHFHTPNSKTRDDPQGAIDAPGRGLIKISSEVSAAISRGHPVVALE 61

Query: 207 STIISHGMPYPQNLETAKEVEAIVRKNGAEPATVAILDGIPCVGLNTEELERLATLGTKC 386
           STIISHGMPYPQNLETAKEVE IVRKNGA PATVAILDG PCVGLN +ELERL+ LG + 
Sbjct: 62  STIISHGMPYPQNLETAKEVETIVRKNGAVPATVAILDGTPCVGLNEKELERLSILGNRV 121

Query: 387 QKTSRRDIAHVVATKGNGATTVSATMIFASMVGIPIFVTGGIGGVHRHGENTMDISSDLT 566
           QKT+RRDIA VVA  GNGATTVSATM FAS VGIP+FVTGGIGGVHRHGE TMDISSDLT
Sbjct: 122 QKTARRDIAQVVARGGNGATTVSATMFFASKVGIPVFVTGGIGGVHRHGEQTMDISSDLT 181

Query: 567 ELGRTPVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTGKSGCKAPSRVD 743
           ELGRTPVAVISAGVKSILDIPRTLEYLETQGVCVAAY+TNEFPAFFT  SGCKAP RVD
Sbjct: 182 ELGRTPVAVISAGVKSILDIPRTLEYLETQGVCVAAYRTNEFPAFFTETSGCKAPCRVD 240


>ref|XP_003534699.1| PREDICTED: pseudouridine-5'-phosphate glycosidase-like [Glycine
           max]
          Length = 485

 Score =  346 bits (888), Expect = 3e-93
 Identities = 181/234 (77%), Positives = 198/234 (84%)
 Frame = +3

Query: 42  MASSAFSRIANLQRHFNPADSIRKGGNENVGVGLVKVSPDVSEALSRGKAVVALESTIIS 221
           MA SA  R+ANL RH + ++S+ K     VG   +KV+ +VSEALS G+AVVALESTIIS
Sbjct: 1   MAFSAVWRLANLGRHLDLSESVNKAAP--VGSIKLKVASEVSEALSLGRAVVALESTIIS 58

Query: 222 HGMPYPQNLETAKEVEAIVRKNGAEPATVAILDGIPCVGLNTEELERLATLGTKCQKTSR 401
           HGMPYPQNLETAKEVE IVR+NGA PAT+AILDG PCVGL+ EELERLA LGT+ QKT+R
Sbjct: 59  HGMPYPQNLETAKEVERIVRENGAVPATIAILDGTPCVGLSVEELERLAILGTRAQKTAR 118

Query: 402 RDIAHVVATKGNGATTVSATMIFASMVGIPIFVTGGIGGVHRHGENTMDISSDLTELGRT 581
           RDIAHVVA  GNGATTVSATM+FASMV IP+FVTGGIGGVHRH E TMDISSDLTELGRT
Sbjct: 119 RDIAHVVACGGNGATTVSATMLFASMVHIPVFVTGGIGGVHRHSEQTMDISSDLTELGRT 178

Query: 582 PVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTGKSGCKAPSRVD 743
           PV V+ AGVKSILDIPRTLEYLET GVCVAAYKTNEFPAFFT  SGCK   RVD
Sbjct: 179 PVTVVCAGVKSILDIPRTLEYLETLGVCVAAYKTNEFPAFFTESSGCKVSCRVD 232


>ref|XP_003605427.1| Pseudouridine-5'-phosphate glycosidase [Medicago truncatula]
           gi|355506482|gb|AES87624.1| Pseudouridine-5'-phosphate
           glycosidase [Medicago truncatula]
          Length = 350

 Score =  345 bits (885), Expect = 6e-93
 Identities = 180/237 (75%), Positives = 199/237 (83%), Gaps = 3/237 (1%)
 Frame = +3

Query: 42  MASSAFSRIANLQRHFNPADSIRKGGNENVGVGL---VKVSPDVSEALSRGKAVVALEST 212
           M SSA  RI N++RHF+  +++ K    N        VKV+ +VSEALS G+AVVALEST
Sbjct: 1   MTSSAALRINNIRRHFDSDNTVNKPTEVNAAGASSINVKVASEVSEALSLGRAVVALEST 60

Query: 213 IISHGMPYPQNLETAKEVEAIVRKNGAEPATVAILDGIPCVGLNTEELERLATLGTKCQK 392
           IISHGMPYPQNL+TAKEVE IV+KNGA PAT+AILDG+P VGL+ EELERLATLG + QK
Sbjct: 61  IISHGMPYPQNLQTAKEVEGIVKKNGAVPATIAILDGVPIVGLSGEELERLATLGPRAQK 120

Query: 393 TSRRDIAHVVATKGNGATTVSATMIFASMVGIPIFVTGGIGGVHRHGENTMDISSDLTEL 572
           T+RRDIA+VVA  GNGATTVSATM  ASMVGI +FVTGGIGGVHRHGE TMDISSD+TEL
Sbjct: 121 TARRDIAYVVARGGNGATTVSATMFLASMVGIHVFVTGGIGGVHRHGEYTMDISSDITEL 180

Query: 573 GRTPVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTGKSGCKAPSRVD 743
           GRTPVAVI AGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFT  SGCK P RVD
Sbjct: 181 GRTPVAVICAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTASSGCKVPCRVD 237


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