BLASTX nr result

ID: Panax21_contig00023257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023257
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Viti...   493   e-137
emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]   493   e-137
ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP...   485   e-135
ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricin...   484   e-134
ref|XP_002304546.1| predicted protein [Populus trichocarpa] gi|2...   484   e-134

>ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Vitis vinifera]
            gi|297745398|emb|CBI40478.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  493 bits (1270), Expect = e-137
 Identities = 242/271 (89%), Positives = 257/271 (94%)
 Frame = -2

Query: 1090 MTTEWKSIRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKL 911
            MTTEWKSIRL+PIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKL
Sbjct: 65   MTTEWKSIRLFPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKL 124

Query: 910  SNLQWMAIVLLAIGTTTSQVKGCGEASCDSLFSAPIQGYMLGVLSACLSALAGIYTEFLL 731
            SNLQWMAIVLLAIGTTTSQV+GCGEASCDSLFSAPIQGYMLG+LSACLSALAG+YTEFL+
Sbjct: 125  SNLQWMAIVLLAIGTTTSQVRGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLM 184

Query: 730  KKNNDSLYWQNVQLYTCGAIFNMVRLLLDDFRGGFENGPWWQRLFNGYSITTWLVVLNLG 551
            KKN+DSLYWQNVQLYT GAIFNM RL+LDD+R GFE GPWW RLFNGYS+TTW+VVLNLG
Sbjct: 185  KKNDDSLYWQNVQLYTFGAIFNMARLILDDYRSGFEKGPWWHRLFNGYSVTTWMVVLNLG 244

Query: 550  STGLLVSWLMKYADNIVKVYSTSMAMLLTMILSVFLFNFKPTLQLFLGIGICIMSLQMYF 371
            STGLLVSWLMKYADNIVKVYSTSMAMLLTM+LSVFLFNFKPTLQLFLGI IC+MSL MYF
Sbjct: 245  STGLLVSWLMKYADNIVKVYSTSMAMLLTMVLSVFLFNFKPTLQLFLGIVICMMSLHMYF 304

Query: 370  APPTMLVDLPLPVKTAPEGFVEVSVDRRTDS 278
            APPTMLVDLPL VK+APE      +DRRT+S
Sbjct: 305  APPTMLVDLPLTVKSAPES----HIDRRTNS 331


>emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]
          Length = 392

 Score =  493 bits (1270), Expect = e-137
 Identities = 242/271 (89%), Positives = 257/271 (94%)
 Frame = -2

Query: 1090 MTTEWKSIRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKL 911
            MTTEWKSIRL+PIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKL
Sbjct: 126  MTTEWKSIRLFPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKL 185

Query: 910  SNLQWMAIVLLAIGTTTSQVKGCGEASCDSLFSAPIQGYMLGVLSACLSALAGIYTEFLL 731
            SNLQWMAIVLLAIGTTTSQV+GCGEASCDSLFSAPIQGYMLG+LSACLSALAG+YTEFL+
Sbjct: 186  SNLQWMAIVLLAIGTTTSQVRGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLM 245

Query: 730  KKNNDSLYWQNVQLYTCGAIFNMVRLLLDDFRGGFENGPWWQRLFNGYSITTWLVVLNLG 551
            KKN+DSLYWQNVQLYT GAIFNM RL+LDD+R GFE GPWW RLFNGYS+TTW+VVLNLG
Sbjct: 246  KKNDDSLYWQNVQLYTFGAIFNMARLILDDYRSGFEKGPWWHRLFNGYSVTTWMVVLNLG 305

Query: 550  STGLLVSWLMKYADNIVKVYSTSMAMLLTMILSVFLFNFKPTLQLFLGIGICIMSLQMYF 371
            STGLLVSWLMKYADNIVKVYSTSMAMLLTM+LSVFLFNFKPTLQLFLGI IC+MSL MYF
Sbjct: 306  STGLLVSWLMKYADNIVKVYSTSMAMLLTMVLSVFLFNFKPTLQLFLGIVICMMSLHMYF 365

Query: 370  APPTMLVDLPLPVKTAPEGFVEVSVDRRTDS 278
            APPTMLVDLPL VK+APE      +DRRT+S
Sbjct: 366  APPTMLVDLPLTVKSAPES----HIDRRTNS 392


>ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP-sugar transporter
            protein SLC35A4-like [Glycine max]
          Length = 335

 Score =  485 bits (1248), Expect = e-135
 Identities = 234/269 (86%), Positives = 253/269 (94%)
 Frame = -2

Query: 1090 MTTEWKSIRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKL 911
            MTTEWK++ L+PIPS+IYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL R+L
Sbjct: 65   MTTEWKTVSLFPIPSVIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLGRRL 124

Query: 910  SNLQWMAIVLLAIGTTTSQVKGCGEASCDSLFSAPIQGYMLGVLSACLSALAGIYTEFLL 731
            SNLQWMAIVLLA+GTTTSQV+GCGEASCDSLFSAPIQGYMLGVLSACLSALAGIYTEFL+
Sbjct: 125  SNLQWMAIVLLAVGTTTSQVRGCGEASCDSLFSAPIQGYMLGVLSACLSALAGIYTEFLM 184

Query: 730  KKNNDSLYWQNVQLYTCGAIFNMVRLLLDDFRGGFENGPWWQRLFNGYSITTWLVVLNLG 551
            KKNNDSLYWQN+QLYT G +FNM RLL DDFRGGFENGPWWQR+FNGY+ITTW+VVLNLG
Sbjct: 185  KKNNDSLYWQNIQLYTFGTLFNMARLLADDFRGGFENGPWWQRIFNGYTITTWMVVLNLG 244

Query: 550  STGLLVSWLMKYADNIVKVYSTSMAMLLTMILSVFLFNFKPTLQLFLGIGICIMSLQMYF 371
            STGLLVSWLMK+ADNIVKVYSTSMAMLLTMILS+FLFNFKPTLQLFLGI IC+MSL MYF
Sbjct: 245  STGLLVSWLMKHADNIVKVYSTSMAMLLTMILSLFLFNFKPTLQLFLGIIICMMSLHMYF 304

Query: 370  APPTMLVDLPLPVKTAPEGFVEVSVDRRT 284
            APP ML+D+P  VK   E  +EVSVDRRT
Sbjct: 305  APPNMLLDMPXTVKPDEEKLIEVSVDRRT 333


>ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricinus communis]
            gi|223527620|gb|EEF29733.1| cmp-sialic acid transporter,
            putative [Ricinus communis]
          Length = 335

 Score =  484 bits (1247), Expect = e-134
 Identities = 233/271 (85%), Positives = 254/271 (93%)
 Frame = -2

Query: 1090 MTTEWKSIRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKL 911
            MTT+WK++RL+PIPSIIYLIHNNVQFATL YVDTSTYQIMGNLKIVTTGILFRLFL++KL
Sbjct: 65   MTTDWKTVRLFPIPSIIYLIHNNVQFATLIYVDTSTYQIMGNLKIVTTGILFRLFLKKKL 124

Query: 910  SNLQWMAIVLLAIGTTTSQVKGCGEASCDSLFSAPIQGYMLGVLSACLSALAGIYTEFLL 731
            SNLQWMAI LLA+GTTTSQVKGCGEASCDSLFS+PIQGYMLG+LSACLSALAG+YTEFL+
Sbjct: 125  SNLQWMAIALLAVGTTTSQVKGCGEASCDSLFSSPIQGYMLGILSACLSALAGVYTEFLM 184

Query: 730  KKNNDSLYWQNVQLYTCGAIFNMVRLLLDDFRGGFENGPWWQRLFNGYSITTWLVVLNLG 551
            KKNNDSLYWQN+QLYT GAIFNM RLLLDDFRGGFE GPWWQRLF+GY+ITTW+VVLNLG
Sbjct: 185  KKNNDSLYWQNIQLYTFGAIFNMARLLLDDFRGGFEKGPWWQRLFSGYTITTWMVVLNLG 244

Query: 550  STGLLVSWLMKYADNIVKVYSTSMAMLLTMILSVFLFNFKPTLQLFLGIGICIMSLQMYF 371
             +GLLVSWLMKYADNIVKVYSTSMAMLLTM+LSVFLFNF PTLQLFLGI IC+MSL MYF
Sbjct: 245  CSGLLVSWLMKYADNIVKVYSTSMAMLLTMVLSVFLFNFSPTLQLFLGIIICMMSLHMYF 304

Query: 370  APPTMLVDLPLPVKTAPEGFVEVSVDRRTDS 278
            APP MLVDLP   K  PE  ++VSV+RRTDS
Sbjct: 305  APPGMLVDLPSMGKADPESLIDVSVERRTDS 335


>ref|XP_002304546.1| predicted protein [Populus trichocarpa] gi|222841978|gb|EEE79525.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  484 bits (1247), Expect = e-134
 Identities = 235/271 (86%), Positives = 254/271 (93%)
 Frame = -2

Query: 1090 MTTEWKSIRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKL 911
            +TTEWKS+RLY IPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTT ILFRLFLRR+L
Sbjct: 65   VTTEWKSVRLYVIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTAILFRLFLRRRL 124

Query: 910  SNLQWMAIVLLAIGTTTSQVKGCGEASCDSLFSAPIQGYMLGVLSACLSALAGIYTEFLL 731
            SNLQWMAIVLLA+GTTTSQVKGCGEASCDSLF+APIQGYMLGVLSACLSALAG+YTEFL+
Sbjct: 125  SNLQWMAIVLLAVGTTTSQVKGCGEASCDSLFAAPIQGYMLGVLSACLSALAGVYTEFLM 184

Query: 730  KKNNDSLYWQNVQLYTCGAIFNMVRLLLDDFRGGFENGPWWQRLFNGYSITTWLVVLNLG 551
            KKNNDSLYWQNVQLYT G+IFNM RL+LDD+RGG+ENG WWQRLFNGYSITTW+VVLNLG
Sbjct: 185  KKNNDSLYWQNVQLYTFGSIFNMARLVLDDYRGGYENGSWWQRLFNGYSITTWMVVLNLG 244

Query: 550  STGLLVSWLMKYADNIVKVYSTSMAMLLTMILSVFLFNFKPTLQLFLGIGICIMSLQMYF 371
            STGLLVSWLMKYADNIVKVYSTS+AMLLTM+LSV+LFN KPTLQL LG  IC+MSL MYF
Sbjct: 245  STGLLVSWLMKYADNIVKVYSTSLAMLLTMVLSVYLFNLKPTLQLLLGTIICMMSLHMYF 304

Query: 370  APPTMLVDLPLPVKTAPEGFVEVSVDRRTDS 278
            APP MLVDLP  V+ APE   EV+V+RRTDS
Sbjct: 305  APPNMLVDLPTQVRAAPESLKEVAVERRTDS 335


Top