BLASTX nr result

ID: Panax21_contig00023250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023250
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308863.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_003520476.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   157   1e-36
ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   155   2e-36
emb|CBI38283.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002336224.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36

>ref|XP_002308863.1| predicted protein [Populus trichocarpa] gi|222854839|gb|EEE92386.1|
            predicted protein [Populus trichocarpa]
          Length = 951

 Score =  159 bits (403), Expect = 2e-37
 Identities = 73/87 (83%), Positives = 79/87 (90%)
 Frame = -1

Query: 508  IHDFDLTNYVANKSNSRQQLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDTHISP 329
            IHDFDLT Y+ANK+N+++QLYELYALTNHYG MGSGHYTAHIKLLDENRWYNFDDTHISP
Sbjct: 850  IHDFDLTKYIANKNNTQRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDTHISP 909

Query: 328  INEEDVRSGAAYVLFYRRVKADIACIN 248
            INEEDV+S AAYVLFYRRVK   A  N
Sbjct: 910  INEEDVKSAAAYVLFYRRVKTSDAISN 936


>ref|XP_003520476.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine max]
          Length = 938

 Score =  157 bits (396), Expect = 1e-36
 Identities = 71/87 (81%), Positives = 81/87 (93%)
 Frame = -1

Query: 508  IHDFDLTNYVANKSNSRQQLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDTHISP 329
            IHDFDLTNY+ANK+NSR+QLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDD+HIS 
Sbjct: 849  IHDFDLTNYIANKNNSRRQLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDSHISL 908

Query: 328  INEEDVRSGAAYVLFYRRVKADIACIN 248
            I+E++V + AAYVLFYRRVK D A ++
Sbjct: 909  ISEDEVNTAAAYVLFYRRVKTDDAAVS 935


>ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Vitis
            vinifera]
          Length = 1056

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/87 (81%), Positives = 79/87 (90%)
 Frame = -1

Query: 508  IHDFDLTNYVANKSNSRQQLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDTHISP 329
            IHD DLTNYVA+K+NSR Q+YELYALTNHYG MGSGHYTAHIKLLDENRWYNFDD+HIS 
Sbjct: 853  IHDLDLTNYVAHKNNSRSQIYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISA 912

Query: 328  INEEDVRSGAAYVLFYRRVKADIACIN 248
            INEEDV+S AAYVLFY+RVK D A ++
Sbjct: 913  INEEDVKSAAAYVLFYKRVKIDDASVS 939


>emb|CBI38283.3| unnamed protein product [Vitis vinifera]
          Length = 955

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/87 (81%), Positives = 79/87 (90%)
 Frame = -1

Query: 508  IHDFDLTNYVANKSNSRQQLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDTHISP 329
            IHD DLTNYVA+K+NSR Q+YELYALTNHYG MGSGHYTAHIKLLDENRWYNFDD+HIS 
Sbjct: 853  IHDLDLTNYVAHKNNSRSQIYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISA 912

Query: 328  INEEDVRSGAAYVLFYRRVKADIACIN 248
            INEEDV+S AAYVLFY+RVK D A ++
Sbjct: 913  INEEDVKSAAAYVLFYKRVKIDDASVS 939


>ref|XP_002336224.1| predicted protein [Populus trichocarpa] gi|222832697|gb|EEE71174.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/87 (82%), Positives = 78/87 (89%)
 Frame = -1

Query: 508 IHDFDLTNYVANKSNSRQQLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDTHISP 329
           I DFDLTNY+ANK+N+++QLYELYALTNHYG MGSGHYTAHIKLLDENRWYNFDD HISP
Sbjct: 648 IRDFDLTNYIANKNNTQRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDAHISP 707

Query: 328 INEEDVRSGAAYVLFYRRVKADIACIN 248
           INEEDV+S AAYVLFYRRVK   A  N
Sbjct: 708 INEEDVKSAAAYVLFYRRVKTVDAISN 734


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