BLASTX nr result

ID: Panax21_contig00023239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023239
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133741.1| PREDICTED: PHD finger protein Alfin1-like [C...   341   2e-91
gb|AEF79998.1| PHD finger family protein [Corylus heterophylla]       336   5e-90
ref|XP_002271574.1| PREDICTED: PHD finger protein Alfin1 [Vitis ...   334   2e-89
gb|AFY26897.1| PHD5 [Morella rubra]                                   332   7e-89
ref|XP_002519372.1| ATP synthase alpha subunit mitochondrial, pu...   332   7e-89

>ref|XP_004133741.1| PREDICTED: PHD finger protein Alfin1-like [Cucumis sativus]
            gi|449522474|ref|XP_004168251.1| PREDICTED: PHD finger
            protein Alfin1-like [Cucumis sativus]
          Length = 255

 Score =  341 bits (874), Expect = 2e-91
 Identities = 170/245 (69%), Positives = 183/245 (74%), Gaps = 11/245 (4%)
 Frame = +1

Query: 370  IQPQPNPIPRTVEEVFGDFQGRRA--------EVEKFLQVCDPEKDNLCLYGLPNEAWXX 525
            ++  P+PIPRTVEEV+GDF+GRRA        +VEKF Q CDPEK+NLCLYGLPNE W  
Sbjct: 1    MEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEV 60

Query: 526  XXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDSWLLSVAFYFGARFGFGKNER 705
                            GINFARDGMQEKDWLSLVAVHSDSWLL+VAFYFGARFGFGK ER
Sbjct: 61   NLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTER 120

Query: 706  KRLFQMINDLPTVFEVVSGIAKQSKDLSATQSNGNKSKPSGKMSWSSEPHPKAVKMSPPP 885
            KRLFQMINDLP+VFEVV+G  KQSK+ SAT +NG+KSK SGKMS   E H K VKMSPPP
Sbjct: 121  KRLFQMINDLPSVFEVVTGNGKQSKEQSATHNNGSKSKSSGKMSRQLESHSKGVKMSPPP 180

Query: 886  K---XXXXXXXXXXXXXQGATLCGACGDNYANDEFWICCDVCERWFHGKCVKITPAKAEH 1056
            K                QGAT CGACGDNY NDEFWICCD CERWFHGKCVKITPAKAEH
Sbjct: 181  KEDEDSGDEEEEEEDDEQGAT-CGACGDNYGNDEFWICCDACERWFHGKCVKITPAKAEH 239

Query: 1057 IKQYK 1071
            IKQYK
Sbjct: 240  IKQYK 244


>gb|AEF79998.1| PHD finger family protein [Corylus heterophylla]
          Length = 253

 Score =  336 bits (862), Expect = 5e-90
 Identities = 170/246 (69%), Positives = 181/246 (73%), Gaps = 9/246 (3%)
 Frame = +1

Query: 361  MDGIQPQPNPIPRTVEEVFGDFQGRRA--------EVEKFLQVCDPEKDNLCLYGLPNEA 516
            M+GI   P+PIPRTVEEVF DF+GRRA        +VEKF Q CDPEK+NLCLYGLPNE 
Sbjct: 1    MEGI---PHPIPRTVEEVFQDFKGRRAGLIKALTNDVEKFYQQCDPEKENLCLYGLPNET 57

Query: 517  WXXXXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDSWLLSVAFYFGARFGFGK 696
            W                  GINFARDGMQEKDWLSLVAVHSDSWLL+VAFYFGARFGFGK
Sbjct: 58   WEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGK 117

Query: 697  NERKRLFQMINDLPTVFEVVSGIAKQSKDLSATQSNGNKSKPSGK-MSWSSEPHPKAVKM 873
            NERKRLFQMINDLPT+FEVV+G  KQSKD SAT  N +KSK SGK  S  SEP PK VKM
Sbjct: 118  NERKRLFQMINDLPTIFEVVTGNVKQSKDQSATH-NSSKSKLSGKTQSRQSEPQPKGVKM 176

Query: 874  SPPPKXXXXXXXXXXXXXQGATLCGACGDNYANDEFWICCDVCERWFHGKCVKITPAKAE 1053
            SPPPK             +    CGACGDNY  DEFWICCD+CERWFHGKCVKITPAKAE
Sbjct: 177  SPPPKEEDESGEEDEEDDEQGATCGACGDNYGTDEFWICCDICERWFHGKCVKITPAKAE 236

Query: 1054 HIKQYK 1071
            HIKQYK
Sbjct: 237  HIKQYK 242


>ref|XP_002271574.1| PREDICTED: PHD finger protein Alfin1 [Vitis vinifera]
            gi|297739439|emb|CBI29621.3| unnamed protein product
            [Vitis vinifera]
          Length = 253

 Score =  334 bits (857), Expect = 2e-89
 Identities = 162/245 (66%), Positives = 182/245 (74%), Gaps = 8/245 (3%)
 Frame = +1

Query: 361  MDGIQPQPNPIPRTVEEVFGDFQGRRA--------EVEKFLQVCDPEKDNLCLYGLPNEA 516
            M+G+ P  +P+PRTVEEVF D++GRRA        EVEKF Q CDPEK+NLCLYGLPNE 
Sbjct: 1    MEGLPP--HPVPRTVEEVFSDYRGRRAGLIKALTTEVEKFYQQCDPEKENLCLYGLPNET 58

Query: 517  WXXXXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDSWLLSVAFYFGARFGFGK 696
            W                  GINFARDGMQEKDWLSLVAVHSDSWLL+VAFYFGARFGFGK
Sbjct: 59   WEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGK 118

Query: 697  NERKRLFQMINDLPTVFEVVSGIAKQSKDLSATQSNGNKSKPSGKMSWSSEPHPKAVKMS 876
            +ERKRLFQMIN+LPT+FEVV+G+ KQ +D+S   +N NKSK SGKMS   EP  K VK+S
Sbjct: 119  SERKRLFQMINELPTIFEVVTGV-KQQRDMSGNHNNSNKSKSSGKMSRQPEPQTKGVKVS 177

Query: 877  PPPKXXXXXXXXXXXXXQGATLCGACGDNYANDEFWICCDVCERWFHGKCVKITPAKAEH 1056
            PP K             +   +CGACGDNYANDEFWICCDVCE+WFHGKCVKITPAKAEH
Sbjct: 178  PPSKEEDESGDEDAEDDEQGAICGACGDNYANDEFWICCDVCEKWFHGKCVKITPAKAEH 237

Query: 1057 IKQYK 1071
            IKQYK
Sbjct: 238  IKQYK 242


>gb|AFY26897.1| PHD5 [Morella rubra]
          Length = 252

 Score =  332 bits (852), Expect = 7e-89
 Identities = 165/245 (67%), Positives = 179/245 (73%), Gaps = 8/245 (3%)
 Frame = +1

Query: 361  MDGIQPQPNPIPRTVEEVFGDFQGRRA--------EVEKFLQVCDPEKDNLCLYGLPNEA 516
            M+GI   P+P+PRTVEEVF DF+GRRA        +V+KF Q CDPEK+NLCLYGLPNE 
Sbjct: 1    MEGI---PHPVPRTVEEVFQDFKGRRAGLIKALTTDVDKFYQQCDPEKENLCLYGLPNET 57

Query: 517  WXXXXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDSWLLSVAFYFGARFGFGK 696
            W                  GINFARDGMQEKDWLSLVAVHSDSWLL+VAFYFGARFGFGK
Sbjct: 58   WDVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGK 117

Query: 697  NERKRLFQMINDLPTVFEVVSGIAKQSKDLSATQSNGNKSKPSGKMSWSSEPHPKAVKMS 876
            NERKRLFQMIN+LPT+FEVV+G  KQ KD SAT  N +KSK SGK S  +EP  K VKMS
Sbjct: 118  NERKRLFQMINELPTIFEVVTGNVKQPKDQSATH-NSSKSKSSGKASRQTEPQAKGVKMS 176

Query: 877  PPPKXXXXXXXXXXXXXQGATLCGACGDNYANDEFWICCDVCERWFHGKCVKITPAKAEH 1056
            PPPK             +    CGACGDNY  DEFWICCDVCERWFHGKCVKITPAKAEH
Sbjct: 177  PPPKEEDESGEEEEEDDEQGATCGACGDNYGTDEFWICCDVCERWFHGKCVKITPAKAEH 236

Query: 1057 IKQYK 1071
            IKQYK
Sbjct: 237  IKQYK 241


>ref|XP_002519372.1| ATP synthase alpha subunit mitochondrial, putative [Ricinus communis]
            gi|223541439|gb|EEF42989.1| ATP synthase alpha subunit
            mitochondrial, putative [Ricinus communis]
          Length = 367

 Score =  332 bits (852), Expect = 7e-89
 Identities = 166/248 (66%), Positives = 181/248 (72%), Gaps = 9/248 (3%)
 Frame = +1

Query: 355  KRMDGIQPQPNPIPRTVEEVFGDFQGRRA--------EVEKFLQVCDPEKDNLCLYGLPN 510
            KRM+GI   P PIPRTVEEVF DF+GRR+        +VEKF Q CDPEK+NLCLYGLPN
Sbjct: 112  KRMEGI---PQPIPRTVEEVFSDFKGRRSGLIKALTSDVEKFYQQCDPEKENLCLYGLPN 168

Query: 511  EAWXXXXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDSWLLSVAFYFGARFGF 690
            E W                  GINFARDGMQEKDWLSLVAVHSDSWLL+VAFYFGARFGF
Sbjct: 169  ETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGF 228

Query: 691  GKNERKRLFQMINDLPTVFEVVSGIAKQSKDLSATQSNGNKSKPSGKM-SWSSEPHPKAV 867
            GKNERKRLFQMIN+LPT+FEVVSG  KQ+KD SAT +N  KSK +GKM S   EP  KAV
Sbjct: 229  GKNERKRLFQMINELPTIFEVVSGNVKQAKDQSATHNNSGKSKSTGKMQSRQPEPPTKAV 288

Query: 868  KMSPPPKXXXXXXXXXXXXXQGATLCGACGDNYANDEFWICCDVCERWFHGKCVKITPAK 1047
            KM+PP K             +    CGACG++Y  DEFWICCDVCERWFHGKCVKITPAK
Sbjct: 289  KMTPPAKEEDESGEEEEEDDEQGATCGACGESYGTDEFWICCDVCERWFHGKCVKITPAK 348

Query: 1048 AEHIKQYK 1071
            AEHIKQYK
Sbjct: 349  AEHIKQYK 356


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