BLASTX nr result
ID: Panax21_contig00023173
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00023173 (387 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi... 54 4e-14 emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera] 54 4e-14 emb|CBI37462.3| unnamed protein product [Vitis vinifera] 54 4e-14 ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containi... 54 6e-13 ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi... 52 1e-12 >ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400, mitochondrial-like [Vitis vinifera] Length = 709 Score = 53.5 bits (127), Expect(2) = 4e-14 Identities = 26/34 (76%), Positives = 31/34 (91%) Frame = -2 Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102 SP+A+TYAIMI+ALVQSDR EE FKL+ DMI+SG Sbjct: 479 SPTAKTYAIMILALVQSDRTEECFKLIKDMINSG 512 Score = 48.9 bits (115), Expect(2) = 4e-14 Identities = 22/27 (81%), Positives = 24/27 (88%) Frame = -1 Query: 99 LPDVSTYKELIEGMCLARKTEAAYKFL 19 LPDVSTYK++IEGMCLA K E AYKFL Sbjct: 514 LPDVSTYKQVIEGMCLAGKVEEAYKFL 540 >emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera] Length = 708 Score = 53.5 bits (127), Expect(2) = 4e-14 Identities = 26/34 (76%), Positives = 31/34 (91%) Frame = -2 Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102 SP+A+TYAIMI+ALVQSDR EE FKL+ DMI+SG Sbjct: 452 SPTAKTYAIMILALVQSDRTEECFKLIKDMINSG 485 Score = 48.9 bits (115), Expect(2) = 4e-14 Identities = 22/27 (81%), Positives = 24/27 (88%) Frame = -1 Query: 99 LPDVSTYKELIEGMCLARKTEAAYKFL 19 LPDVSTYK++IEGMCLA K E AYKFL Sbjct: 487 LPDVSTYKQVIEGMCLAGKVEEAYKFL 513 >emb|CBI37462.3| unnamed protein product [Vitis vinifera] Length = 673 Score = 53.5 bits (127), Expect(2) = 4e-14 Identities = 26/34 (76%), Positives = 31/34 (91%) Frame = -2 Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102 SP+A+TYAIMI+ALVQSDR EE FKL+ DMI+SG Sbjct: 443 SPTAKTYAIMILALVQSDRTEECFKLIKDMINSG 476 Score = 48.9 bits (115), Expect(2) = 4e-14 Identities = 22/27 (81%), Positives = 24/27 (88%) Frame = -1 Query: 99 LPDVSTYKELIEGMCLARKTEAAYKFL 19 LPDVSTYK++IEGMCLA K E AYKFL Sbjct: 478 LPDVSTYKQVIEGMCLAGKVEEAYKFL 504 >ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400, mitochondrial-like [Glycine max] Length = 466 Score = 53.5 bits (127), Expect(2) = 6e-13 Identities = 26/34 (76%), Positives = 30/34 (88%) Frame = -2 Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102 SP+A+TYAI+IVAL Q DRMEE FKL+G MISSG Sbjct: 236 SPTAKTYAIIIVALAQHDRMEECFKLIGHMISSG 269 Score = 45.1 bits (105), Expect(2) = 6e-13 Identities = 19/27 (70%), Positives = 23/27 (85%) Frame = -1 Query: 99 LPDVSTYKELIEGMCLARKTEAAYKFL 19 LPDV+TYKE+IEGMC+ K + AYKFL Sbjct: 271 LPDVTTYKEIIEGMCVCGKIDEAYKFL 297 >ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400, mitochondrial-like [Glycine max] Length = 466 Score = 52.4 bits (124), Expect(2) = 1e-12 Identities = 25/34 (73%), Positives = 30/34 (88%) Frame = -2 Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102 SP+A+TYAI+IVAL Q DRME+ FKL+G MISSG Sbjct: 236 SPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSG 269 Score = 45.4 bits (106), Expect(2) = 1e-12 Identities = 19/27 (70%), Positives = 23/27 (85%) Frame = -1 Query: 99 LPDVSTYKELIEGMCLARKTEAAYKFL 19 LPDV+TYKE+IEGMC+ K + AYKFL Sbjct: 271 LPDVTTYKEIIEGMCMCGKIDEAYKFL 297