BLASTX nr result

ID: Panax21_contig00023173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023173
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi...    54   4e-14
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]    54   4e-14
emb|CBI37462.3| unnamed protein product [Vitis vinifera]               54   4e-14
ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containi...    54   6e-13
ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi...    52   1e-12

>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Vitis vinifera]
          Length = 709

 Score = 53.5 bits (127), Expect(2) = 4e-14
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -2

Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102
           SP+A+TYAIMI+ALVQSDR EE FKL+ DMI+SG
Sbjct: 479 SPTAKTYAIMILALVQSDRTEECFKLIKDMINSG 512



 Score = 48.9 bits (115), Expect(2) = 4e-14
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = -1

Query: 99  LPDVSTYKELIEGMCLARKTEAAYKFL 19
           LPDVSTYK++IEGMCLA K E AYKFL
Sbjct: 514 LPDVSTYKQVIEGMCLAGKVEEAYKFL 540


>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
          Length = 708

 Score = 53.5 bits (127), Expect(2) = 4e-14
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -2

Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102
           SP+A+TYAIMI+ALVQSDR EE FKL+ DMI+SG
Sbjct: 452 SPTAKTYAIMILALVQSDRTEECFKLIKDMINSG 485



 Score = 48.9 bits (115), Expect(2) = 4e-14
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = -1

Query: 99  LPDVSTYKELIEGMCLARKTEAAYKFL 19
           LPDVSTYK++IEGMCLA K E AYKFL
Sbjct: 487 LPDVSTYKQVIEGMCLAGKVEEAYKFL 513


>emb|CBI37462.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score = 53.5 bits (127), Expect(2) = 4e-14
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -2

Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102
           SP+A+TYAIMI+ALVQSDR EE FKL+ DMI+SG
Sbjct: 443 SPTAKTYAIMILALVQSDRTEECFKLIKDMINSG 476



 Score = 48.9 bits (115), Expect(2) = 4e-14
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = -1

Query: 99  LPDVSTYKELIEGMCLARKTEAAYKFL 19
           LPDVSTYK++IEGMCLA K E AYKFL
Sbjct: 478 LPDVSTYKQVIEGMCLAGKVEEAYKFL 504


>ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score = 53.5 bits (127), Expect(2) = 6e-13
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -2

Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102
           SP+A+TYAI+IVAL Q DRMEE FKL+G MISSG
Sbjct: 236 SPTAKTYAIIIVALAQHDRMEECFKLIGHMISSG 269



 Score = 45.1 bits (105), Expect(2) = 6e-13
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -1

Query: 99  LPDVSTYKELIEGMCLARKTEAAYKFL 19
           LPDV+TYKE+IEGMC+  K + AYKFL
Sbjct: 271 LPDVTTYKEIIEGMCVCGKIDEAYKFL 297


>ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score = 52.4 bits (124), Expect(2) = 1e-12
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -2

Query: 203 SPSARTYAIMIVALVQSDRMEEGFKLLGDMISSG 102
           SP+A+TYAI+IVAL Q DRME+ FKL+G MISSG
Sbjct: 236 SPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSG 269



 Score = 45.4 bits (106), Expect(2) = 1e-12
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -1

Query: 99  LPDVSTYKELIEGMCLARKTEAAYKFL 19
           LPDV+TYKE+IEGMC+  K + AYKFL
Sbjct: 271 LPDVTTYKEIIEGMCMCGKIDEAYKFL 297


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