BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023149
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...   171   2e-40
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   169   1e-39
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   161   2e-37
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   139   2e-30
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   139   2e-30

>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
            predicted protein [Populus trichocarpa]
          Length = 503

 Score =  171 bits (434), Expect = 2e-40
 Identities = 118/377 (31%), Positives = 178/377 (47%), Gaps = 4/377 (1%)
 Frame = +1

Query: 1    FNEVLSIFEISGGDASWDYGKQDFLD-CNSDINATDLRASGTDLTWWNSSDTKPIYKKLD 177
            FN + +     GG  +W  G  D LD C  +    DLR SG   TW N      I +KLD
Sbjct: 126  FNAIRNQSHRLGGSTTWA-GTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMRKLD 184

Query: 178  RELVNDLWLLQFPLAQYFFTPRDISDHCPVVIYSGLMIPPRPKPFQFFNFMVILPEFMAV 357
            R LVN+ W L FPL++  F P  ISDH P+V+          KPF+FF+  +        
Sbjct: 185  RVLVNEKWNLNFPLSEVRFLPSGISDHSPMVVKVIGNDQNIKKPFRFFDMWM-------- 236

Query: 358  VQGAWNVSVPGDPQQIMAGKLKVVKQALYILNRERGS-LSSIIGKARTVHHEAQNXXXXX 534
                 + +  G P   +   LK +KQ L + N    S +S  +  A+    +AQ      
Sbjct: 237  -----DQNSGGCPMYQLCCNLKKLKQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTA 291

Query: 535  XXXXXXXXXXXXXXXXXWXXXXXXXXXXKQKSRI*WLKEGDTNSGFFYSQIKNRWNQNKI 714
                                        KQK+RI WL  GD N+ +F+  +  R N+NK+
Sbjct: 292  HENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKL 351

Query: 715  LAITNDDSSVQTGQKEIQGITVDHFQALLGT-ALPVIRLDNFSLNSPKC-VSSAQATALE 888
            L++T +D  V  G + ++   + +F  +LG   +P +  +    ++    +SS Q   L 
Sbjct: 352  LSLTREDGEVVEGHEAVKSEVIAYFHRVLGVDQMPRVLNEEVMESAINLKLSSTQQHVLA 411

Query: 889  RDITDEEILLTLKSMKKNKSPGLDGFNVNFFLHCWSIVGRTFTLFVHSFFKNGCLLRGTN 1068
            + +T +EI   + S+K NK+PGLDGFN  FF   W IVG      V S F+   +L+  N
Sbjct: 412  QVVTRKEIKHAMFSLKNNKAPGLDGFNAGFFKRMWHIVGEDVINAVRSLFQTRRMLKEMN 471

Query: 1069 STAIILVPKVAHPSAMS 1119
            +T+I L+PKVA+P+ ++
Sbjct: 472  ATSISLIPKVANPTRLT 488


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  169 bits (428), Expect = 1e-39
 Identities = 116/375 (30%), Positives = 174/375 (46%), Gaps = 10/375 (2%)
 Frame = +1

Query: 1    FNEVLSIFEISGGDASWDYGKQDFLDCNSDINATDLRASGTDLTWWNSSDTKPIYKKLDR 180
            FN+ L   + S G +    G ++F +C    N +DL   G   TWWN+ +  PI KK+DR
Sbjct: 144  FNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNHYTWWNNQENNPIAKKIDR 203

Query: 181  ELVNDLWLLQFPLAQYFFTPRDISDHCPVVIYSGLMIPPRPKPFQFFNFMVILPEFMAVV 360
             LVND WL+  PL+   F   + SDHCP  +        R KPF+  NF++  PEF+  +
Sbjct: 204  ILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRNKPFKLSNFLMHHPEFIEKI 263

Query: 361  QGAWN-VSVPGDPQQIMAGKLKVVKQALYILNRERGSLSSIIGKARTVHHEAQNXXXXXX 537
            +  W+ ++  G     ++ K K +K  +   NRE  S     G  + V   AQN      
Sbjct: 264  RVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYS-----GLEKRVVQAAQNLKTCQN 318

Query: 538  XXXXXXXXXXXXXXXXWXXXXXXXXXXK-----QKSRI*WLKEGDTNSGFFYSQIKNRWN 702
                                       +     QKSR+ WLK GD+N+ FF+  +  R  
Sbjct: 319  NLLAAPSSYLAGLEKEAHRSWAELALAEERFLCQKSRVLWLKCGDSNTTFFHRMMTARRA 378

Query: 703  QNKILAITNDDSSVQTGQKEIQGITVDHFQALLGTALPVIRLDNF----SLNSPKCVSSA 870
             N+I  + +          E+Q   VD F+ L G++  +I  +      SL   KC  + 
Sbjct: 379  INEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAEGISQINSLTRFKCDENT 438

Query: 871  QATALERDITDEEILLTLKSMKKNKSPGLDGFNVNFFLHCWSIVGRTFTLFVHSFFKNGC 1050
            +   LE ++++ +I     ++  NKSPG DG+   FF   WSIVG +    V  FF++G 
Sbjct: 439  R-QLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGR 497

Query: 1051 LLRGTNSTAIILVPK 1095
            LL   NSTA+ +VPK
Sbjct: 498  LLGQWNSTAVTMVPK 512


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score =  161 bits (408), Expect = 2e-37
 Identities = 105/354 (29%), Positives = 167/354 (47%), Gaps = 4/354 (1%)
 Frame = +1

Query: 70   FLDCNSDINATDLRASGTDLTWWNSSDTKPIYKKLDRELVNDLWLLQFPLAQYFFTPRDI 249
            F DC  +    DL   G   TWWN S T+P+ KKLDR LVN+ W  +FP A   F   D 
Sbjct: 118  FRDCLFEAELCDLVFKGNTFTWWNKSATRPVAKKLDRILVNESWCSRFPSAYAVFGEPDF 177

Query: 250  SDHCPVVIYSGLMIPPRPKPFQFFNFMVILPEFMAVVQGAW-NVSVPGDPQQIMAGKLKV 426
            SDH    +    ++    +PF+F+NF++  P+F+++V   W +++V G     M+ KLK 
Sbjct: 178  SDHASCGVIINPLMHREKRPFRFYNFLLQNPDFISLVGELWYSINVVGSSMFKMSKKLKA 237

Query: 427  VKQALYILNRER-GSLSSIIGKARTVHHEAQNXXXXXXXXXXXXXXXXXXXXXXWXXXXX 603
            +K  +   + E   +L   + +A  +    QN                            
Sbjct: 238  LKNPIRTFSMENFSNLEKRVKEAHNLVLYRQNKTLSDPTIPNAALEMEAQRKWL-ILVKA 296

Query: 604  XXXXXKQKSRI*WLKEGDTNSGFFYSQIKNRWNQNKILAITNDDSSVQTGQKEIQGITVD 783
                  Q+SR+ W+ EGD+N+ +F+    +R   N I  I +D+      Q  I+   ++
Sbjct: 297  EESFFCQRSRVTWMGEGDSNTSYFHRMADSRKAVNTIHIIIDDNGVKIDTQLGIKEHCIE 356

Query: 784  HFQALLGTAL--PVIRLDNFSLNSPKCVSSAQATALERDITDEEILLTLKSMKKNKSPGL 957
            +F  LLG  +  P++  ++F L  P   S  Q   L    + ++I     S   NK+ G 
Sbjct: 357  YFSNLLGGEVGPPMLIQEDFDLLLPFRCSHDQKKELAMSFSRQDIKSAFFSFPSNKTSGP 416

Query: 958  DGFNVNFFLHCWSIVGRTFTLFVHSFFKNGCLLRGTNSTAIILVPKVAHPSAMS 1119
            DGF V FF   WS++G   T  V  FF +  LL+  N+T ++L+PK+ + S M+
Sbjct: 417  DGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVLIPKITNASKMN 470


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  139 bits (349), Expect = 2e-30
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 6/374 (1%)
 Frame = +1

Query: 1    FNEVLSIFEISGGDASWDYGKQDFLDCNSDINATDLRASGTDLTWWNSSDTKP-IYKKLD 177
            FN V    +   G    D   +DF       N  + R++ +  +W NSS  +  +  ++D
Sbjct: 138  FNAVCHSNDRLYGTLVTDAETEDFQQFLLQSNLIESRSTWSYYSWSNSSIGRDRVLSRID 197

Query: 178  RELVNDLWLLQFPLAQYFFTPRDISDHCPVVIYSGLMIPPRPKPFQFFNFMVILPEFMAV 357
            +  VN +WL  +      + P  ISDH P++       P   KPF+F N M    EF+  
Sbjct: 198  KAYVNLVWLGMYAEVSVQYLPPGISDHSPLLFNLMTGRPQGGKPFKFMNVMAEQGEFLET 257

Query: 358  VQGAWNVSVPGDPQQIMAGKLKVVKQALYILNRERGSLSSIIGKARTVHHEAQNXXXXXX 537
            V+ AWN        Q +   LK VK+ L  +  ++  L+    K + + H+ Q+      
Sbjct: 258  VEKAWNSVNGRFKLQAIWLNLKAVKRELKQMKTQKIGLAH--EKVKNLRHQLQDLQSQDD 315

Query: 538  XXXXXXXXXXXXXXXX----WXXXXXXXXXXKQKSRI*WLKEGDTNSGFFYSQIKNRWNQ 705
                                W          +QKSRI WL++GDTNS  F++ +K R   
Sbjct: 316  FDHNDIMQTDAKSIMNDLRHWSHIEDSIL--QQKSRITWLQQGDTNSKLFFTAVKARHAI 373

Query: 706  NKILAITNDDSSVQTGQKEIQGITVDHFQALLGT-ALPVIRLDNFSLNSPKCVSSAQATA 882
            N+I  +  +D  V     E+Q   ++ ++ LLGT A  ++ +D  ++   KC+S+    +
Sbjct: 374  NRIDMLNTEDGRVIQDADEVQEEILEFYKKLLGTRASTLMGVDLNTVRGGKCLSAQAKES 433

Query: 883  LERDITDEEILLTLKSMKKNKSPGLDGFNVNFFLHCWSIVGRTFTLFVHSFFKNGCLLRG 1062
            L R++   EI   L  +  +K+PGLDGFN  FF   W  + +     +  FF N  + R 
Sbjct: 434  LIREVASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRP 493

Query: 1063 TNSTAIILVPKVAH 1104
             N   + L+PKV H
Sbjct: 494  INCIVVTLLPKVQH 507


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  139 bits (349), Expect = 2e-30
 Identities = 111/380 (29%), Positives = 169/380 (44%), Gaps = 15/380 (3%)
 Frame = +1

Query: 1    FNEVLSIFEISGGD--ASWDYGKQDFLDCNSDINATDLRASGTDLTWWNSSDTKPIYKKL 174
            FNE+L + E S  +   +   G +DF    +  + +DL + G   TW N  D  PI+KKL
Sbjct: 558  FNEILDMDEHSRMEDHPAVTSGMRDFQSLVNYCSFSDLASHGPLFTWCNKRDNDPIWKKL 617

Query: 175  DRELVNDLWLLQFPLAQYFFTPRDISDH--CPVVIY--SGLMIPPRPKPFQFFNFMVILP 342
            DR +VN+ W + +P +   F     SDH  C + +   SG  +    KPF+F N +  + 
Sbjct: 618  DRVMVNEAWKMVYPQSYNVFEAGGCSDHLRCRINLNMNSGAQVRGN-KPFKFVNAVADME 676

Query: 343  EFMAVVQGAWNVSVPGDPQQI----MAGKLKVVKQALYILNRERGSLSSIIGKARTVHHE 510
            EF  +V+  W  + P             KLK +K  L  L +E+  + +++ + R  +  
Sbjct: 677  EFKPLVENFWRETEPIHMSTSSLFRFTKKLKALKPKLRGLAKEK--MGNLVKRTREAYLS 734

Query: 511  -AQNXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXX-KQKSRI*WLKEGDTNSGFFYSQ 684
              Q                       W           KQ S++ WLK GD N+  F+  
Sbjct: 735  LCQAQQSNSQNPSQRAMEIESEAYVRWDRIASIEEKYLKQVSKLHWLKVGDKNNKTFHRA 794

Query: 685  IKNRWNQNKILAITNDDSSVQTGQKEIQGITVDHFQA---LLGTALPVIRLDNFSLNSPK 855
               R  QN I  I  +D S  T + +I+  T   FQ    L+      I ++  +   P 
Sbjct: 795  ATARAAQNSIREIQKEDGSTATTKDDIKNETERFFQEFLQLIPNDYEGITVEKLTSLLPY 854

Query: 856  CVSSAQATALERDITDEEILLTLKSMKKNKSPGLDGFNVNFFLHCWSIVGRTFTLFVHSF 1035
              S A+   L   ++ +EI   L SM  +KSPG DG+   F+   W I+G  F L V SF
Sbjct: 855  HCSPAEKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSF 914

Query: 1036 FKNGCLLRGTNSTAIILVPK 1095
            F+ G L +G N+T + L+PK
Sbjct: 915  FEKGFLPKGVNTTILALIPK 934