BLASTX nr result

ID: Panax21_contig00023110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023110
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26820.3| unnamed protein product [Vitis vinifera]              266   1e-69
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   266   1e-69
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   264   5e-69
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       262   2e-68
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       261   4e-68

>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  266 bits (681), Expect = 1e-69
 Identities = 127/156 (81%), Positives = 139/156 (89%)
 Frame = +2

Query: 2    GSDLDGDIYFVCWDPDLIPPRQNQPMDYTPEPSMELDHEVTIEEVEEYFTNYIVNDSLGI 181
            GSDLDGDIYFVCWD DLIPP+Q  PMDYTP P+  LDH+V IEEVEEYFTNYIVNDSLGI
Sbjct: 600  GSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGI 659

Query: 182  IANAHTVFADAEPDKAMSEPCLELAQLFSVAVDFPKTGVPAEIPPKLRVKEYPDFMEKTD 361
            IANAHTVFAD E DKA  +PC ELA+LFS+AVDFPKTGVPAEIP  LRVKEYPDFMEK D
Sbjct: 660  IANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKAD 719

Query: 362  KPTYESKRVLGKLFREVKEIAPHNSSIKSFTREVAR 469
            KPTYES+ V+GKLFREVK+IAPHN +I+SFTR+VAR
Sbjct: 720  KPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVAR 755


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  266 bits (681), Expect = 1e-69
 Identities = 127/156 (81%), Positives = 139/156 (89%)
 Frame = +2

Query: 2    GSDLDGDIYFVCWDPDLIPPRQNQPMDYTPEPSMELDHEVTIEEVEEYFTNYIVNDSLGI 181
            GSDLDGDIYFVCWD DLIPP+Q  PMDYTP P+  LDH+V IEEVEEYFTNYIVNDSLGI
Sbjct: 802  GSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGI 861

Query: 182  IANAHTVFADAEPDKAMSEPCLELAQLFSVAVDFPKTGVPAEIPPKLRVKEYPDFMEKTD 361
            IANAHTVFAD E DKA  +PC ELA+LFS+AVDFPKTGVPAEIP  LRVKEYPDFMEK D
Sbjct: 862  IANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKAD 921

Query: 362  KPTYESKRVLGKLFREVKEIAPHNSSIKSFTREVAR 469
            KPTYES+ V+GKLFREVK+IAPHN +I+SFTR+VAR
Sbjct: 922  KPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVAR 957


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  264 bits (675), Expect = 5e-69
 Identities = 124/156 (79%), Positives = 139/156 (89%)
 Frame = +2

Query: 2    GSDLDGDIYFVCWDPDLIPPRQNQPMDYTPEPSMELDHEVTIEEVEEYFTNYIVNDSLGI 181
            GSDLDGDIYFVCWDPDL+PPRQ QPMDYTP PS +LDH+VTIEEVEEYFTNYIVNDSLGI
Sbjct: 802  GSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVTIEEVEEYFTNYIVNDSLGI 861

Query: 182  IANAHTVFADAEPDKAMSEPCLELAQLFSVAVDFPKTGVPAEIPPKLRVKEYPDFMEKTD 361
            IANAH VFAD EPD AMS+PC +LAQLFS+AVDFPKTGVPAEIP +LR KEYPDFMEK D
Sbjct: 862  IANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPD 921

Query: 362  KPTYESKRVLGKLFREVKEIAPHNSSIKSFTREVAR 469
            KPTY S++V+GKLF++VK+  P  SSI +FT +VAR
Sbjct: 922  KPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDVAR 957


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  262 bits (670), Expect = 2e-68
 Identities = 123/156 (78%), Positives = 139/156 (89%)
 Frame = +2

Query: 2   GSDLDGDIYFVCWDPDLIPPRQNQPMDYTPEPSMELDHEVTIEEVEEYFTNYIVNDSLGI 181
           GSDLDGDIYFVCWDPDLIPPRQ QPMDYTP PS++LDH+VTIEEVEEYFTNY+VND LG+
Sbjct: 492 GSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIEEVEEYFTNYMVNDGLGV 551

Query: 182 IANAHTVFADAEPDKAMSEPCLELAQLFSVAVDFPKTGVPAEIPPKLRVKEYPDFMEKTD 361
           IANAH VFAD EP+ AMS+PC+ELAQLFS+AVDFPKTGVPAEIP +LR KEYPDFMEK D
Sbjct: 552 IANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPD 611

Query: 362 KPTYESKRVLGKLFREVKEIAPHNSSIKSFTREVAR 469
           K TY S++V+GKLFREVK+     SSI +FTR+VAR
Sbjct: 612 KTTYHSEKVIGKLFREVKDKTTQASSITTFTRDVAR 647


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  261 bits (667), Expect = 4e-68
 Identities = 123/156 (78%), Positives = 138/156 (88%)
 Frame = +2

Query: 2    GSDLDGDIYFVCWDPDLIPPRQNQPMDYTPEPSMELDHEVTIEEVEEYFTNYIVNDSLGI 181
            GSDLDGDIYFVCWDPDLIPPRQ Q MDYTP P+ +LDH+VTIEEVEEYFTNYI+NDSLGI
Sbjct: 801  GSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVTIEEVEEYFTNYIINDSLGI 860

Query: 182  IANAHTVFADAEPDKAMSEPCLELAQLFSVAVDFPKTGVPAEIPPKLRVKEYPDFMEKTD 361
            IANAH VFAD EPD AMS+PC +LAQLFS+AVDFPKTGVPAEIP +LR KEYPDFMEK D
Sbjct: 861  IANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPD 920

Query: 362  KPTYESKRVLGKLFREVKEIAPHNSSIKSFTREVAR 469
            KPTY S++V+GKLF++VK   P  SSI +FTR+VAR
Sbjct: 921  KPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDVAR 956


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