BLASTX nr result

ID: Panax21_contig00023098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023098
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   166   4e-39
gb|AFK36810.1| unknown [Lotus japonicus]                              159   4e-37
ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I an...   159   4e-37
gb|AFK35687.1| unknown [Medicago truncatula]                          158   6e-37
ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycin...   157   1e-36

>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  166 bits (419), Expect = 4e-39
 Identities = 78/101 (77%), Positives = 88/101 (87%)
 Frame = -1

Query: 495 MEHGSVQDQSASTFSLTDEDHTLANSLRFTLNQEPRVTFCGYSIPHPSDARVNIRVQTTG 316
           MEHGS  D S STFSL+DEDHTLANS+RFTLNQ+PRV FCGYSIPHPSDARVNIRVQTTG
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60

Query: 315 DQASEVLKDSCQVLMLMCQHVRRTFDQAVLDFRNDQTLKTM 193
           D A EVLKD+CQ LMLMCQHVR TFD+AV+D++  + +K M
Sbjct: 61  DSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKMSKPVKDM 101


>gb|AFK36810.1| unknown [Lotus japonicus]
          Length = 104

 Score =  159 bits (402), Expect = 4e-37
 Identities = 76/101 (75%), Positives = 87/101 (86%)
 Frame = -1

Query: 495 MEHGSVQDQSASTFSLTDEDHTLANSLRFTLNQEPRVTFCGYSIPHPSDARVNIRVQTTG 316
           MEHGS  D+S STFSLTDEDHT AN++R+TLNQ+PRVTFCGYSIPHPSD RVNIRVQTTG
Sbjct: 1   MEHGSHSDESRSTFSLTDEDHTFANAIRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 315 DQASEVLKDSCQVLMLMCQHVRRTFDQAVLDFRNDQTLKTM 193
           + A EVLKDSCQ +MLMCQHVR TFD+AV DF++ +  K M
Sbjct: 61  EPAREVLKDSCQHMMLMCQHVRGTFDKAVNDFKSKKGGKDM 101


>ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Glycine max]
          Length = 106

 Score =  159 bits (402), Expect = 4e-37
 Identities = 77/97 (79%), Positives = 81/97 (83%)
 Frame = -1

Query: 495 MEHGSVQDQSASTFSLTDEDHTLANSLRFTLNQEPRVTFCGYSIPHPSDARVNIRVQTTG 316
           ME GS  DQS STFSL DEDHT ANS+RFTLNQ+PRVTFCGYSIPHPSD RVNIRVQTTG
Sbjct: 1   MELGSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 315 DQASEVLKDSCQVLMLMCQHVRRTFDQAVLDFRNDQT 205
           D A EVLKD CQ LMLMCQHVR TFD A+ DF+  QT
Sbjct: 61  DPAREVLKDGCQDLMLMCQHVRSTFDNAMTDFKRTQT 97


>gb|AFK35687.1| unknown [Medicago truncatula]
          Length = 115

 Score =  158 bits (400), Expect = 6e-37
 Identities = 74/106 (69%), Positives = 88/106 (83%)
 Frame = -1

Query: 495 MEHGSVQDQSASTFSLTDEDHTLANSLRFTLNQEPRVTFCGYSIPHPSDARVNIRVQTTG 316
           MEHGS  D S STFSL DEDHT ANS+RFTLNQ+PRVTFCGYSIPHPS+ RVN+RVQTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 315 DQASEVLKDSCQVLMLMCQHVRRTFDQAVLDFRNDQTLKTMKHQTM 178
           D ASEVLKD CQ LMLMCQHVR TF +AV DF+  +++++   +++
Sbjct: 61  DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVRSTSEKSV 106


>ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycine max]
           gi|255630968|gb|ACU15848.1| unknown [Glycine max]
          Length = 107

 Score =  157 bits (398), Expect = 1e-36
 Identities = 75/99 (75%), Positives = 84/99 (84%)
 Frame = -1

Query: 495 MEHGSVQDQSASTFSLTDEDHTLANSLRFTLNQEPRVTFCGYSIPHPSDARVNIRVQTTG 316
           MEHGS  DQS STFSL DEDHT AN++RFTLNQ+PRV+FCGYSIPHPSD RVNIRVQTTG
Sbjct: 1   MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTTG 60

Query: 315 DQASEVLKDSCQVLMLMCQHVRRTFDQAVLDFRNDQTLK 199
           D + EVLKD+CQ LMLMCQHVR TFD+AV DF+  +  K
Sbjct: 61  DPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARK 99