BLASTX nr result

ID: Panax21_contig00023084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023084
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276725.2| PREDICTED: structure-specific endonuclease s...   177   4e-42
ref|XP_003537333.1| PREDICTED: structure-specific endonuclease s...   151   2e-34
emb|CBI15837.3| unnamed protein product [Vitis vinifera]              142   8e-32
ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203...   134   4e-29
ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-26

>ref|XP_002276725.2| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
           2-like [Vitis vinifera]
          Length = 364

 Score =  177 bits (448), Expect = 4e-42
 Identities = 115/279 (41%), Positives = 146/279 (52%), Gaps = 9/279 (3%)
 Frame = +1

Query: 1   LVVRKAAVAFKSLSGIANKIKLAYTMLTLPTWQSLSLTVNFFSTQYKKHCAGCPSLPEHM 180
           L VRKAA  FKSLSGIANKIKLAYTM TLP WQSL+LTVNFFST+Y KH AGCP LPEHM
Sbjct: 102 LAVRKAAAGFKSLSGIANKIKLAYTMFTLPAWQSLNLTVNFFSTKYTKHSAGCPILPEHM 161

Query: 181 NVQVCSMDELPCYTRSDQNVYQNEELDIEE--CEGIANGTGYSNLAEHEYRECVEAGGDC 354
            VQV  MDELPCY+ SDQ+ + N   D +E   E  ++  G+  +  HE           
Sbjct: 162 RVQVSPMDELPCYSGSDQSFFDNARGDEKEELGERGSSSDGFDQVIAHE----------- 210

Query: 355 REVMETFEFETFHSSAYCRNRIEERTPEFSPNIEESGFKQPRRDSERYDHTQPPF----- 519
              +E F +   H      +         S   +E+  +QP   S   D  + PF     
Sbjct: 211 ETALEQFGWIEEHGLRQPGDSPSPEVVHCSGKTQENAMRQPADLSTSKDEHRSPFCLIDS 270

Query: 520 PIKSPEAVIPETFERDIVPLSEACSSVELDWSSRKDLQTRAAIVEDKPLIKSSTVLCDVE 699
           P+++       T ++D   LS+     E    + K L    A    KP I S    C++E
Sbjct: 271 PVRTSSHSTEGTLDKDTSGLSK-----ENKVLTMKQLPATVAADRGKPKISSLDTSCEIE 325

Query: 700 VIDVFTPEPSYGISLQPKKRRID--YSEIIDLTKSPIFL 810
           VID+ +  P Y  +   KKRR    + EIIDLT SPIF+
Sbjct: 326 VIDLLSCSPDYRTNPCFKKRRATTVHPEIIDLTNSPIFV 364


>ref|XP_003537333.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
           [Glycine max]
          Length = 380

 Score =  151 bits (381), Expect = 2e-34
 Identities = 105/284 (36%), Positives = 145/284 (51%), Gaps = 14/284 (4%)
 Frame = +1

Query: 1   LVVRKAAVAFKSLSGIANKIKLAYTMLTLPTWQSLSLTVNFFSTQYKKHCAGCPSLPEHM 180
           L VRKAAV FKSLSGIANKIKLAYTMLTLP+WQS+++TVNFFST+Y KHCAGCPSLP HM
Sbjct: 113 LAVRKAAVEFKSLSGIANKIKLAYTMLTLPSWQSMNITVNFFSTKYMKHCAGCPSLPVHM 172

Query: 181 NVQVCSMDELPCYTRSDQNVYQNEELDIEECEGIANGTGYSNLAEHEYRECV-----EAG 345
             +  S+DELPCY +    + +NE+  I+E +   N    S        + V     +  
Sbjct: 173 KTKFGSLDELPCYNKGIDGLSENEDDTIDEVQFDDNNISTSGSVPDVSDDLVTPDSPQNP 232

Query: 346 GDCREVMETFEFETFHSSAYCRNRIEERTPEFSPNIEESGFKQPRRDSERYDHTQPPFPI 525
            D  ++ E FE+             E R P    +         +  S+ +  T  P  +
Sbjct: 233 NDGDKISEAFEW---------NKESEAREPPLGNSFAS------QEQSQLFSST-TPLTM 276

Query: 526 KSPEAVI---PETFERDIVPLSEACSSVELDWSSRKDLQTRAAIV---EDKPLIKSSTVL 687
           KS         E  E D        +  + D S  +  Q+ A  +   +++ + ++  V 
Sbjct: 277 KSSSTTSLQRAEIIEED--DFMSVMNKSDADLSQPEPEQSGATTLVANKNRDVGRTFVVP 334

Query: 688 CDVEVIDVFTPEPSYGISLQPKKRRIDYS---EIIDLTKSPIFL 810
            + E+ID+ TP PS    L  KKRR+  S   + IDLT SP F+
Sbjct: 335 HETEIIDLSTPSPSCRSVLDRKKRRVSSSVGTDFIDLTNSPNFI 378


>emb|CBI15837.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  142 bits (359), Expect = 8e-32
 Identities = 86/202 (42%), Positives = 109/202 (53%), Gaps = 7/202 (3%)
 Frame = +1

Query: 1   LVVRKAAVAFKSLSGIANKIKLAYTMLTLPTWQSLSLTVNFFSTQYKKHCAGCPSLPEHM 180
           L VRKAA  FKSLSGIANKIKLAYTM TLP WQSL+LTVNFFST+Y KH AGCP LPEHM
Sbjct: 102 LAVRKAAAGFKSLSGIANKIKLAYTMFTLPAWQSLNLTVNFFSTKYTKHSAGCPILPEHM 161

Query: 181 NVQVCSMDELPCYTRSDQNVYQNEELDIEE--CEGIANGTGYSNLAEHEYRECVEAGGDC 354
            VQV  MDELPCY+ SDQ+ + N   D +E   E  ++  G+  +  HE           
Sbjct: 162 RVQVSPMDELPCYSGSDQSFFDNARGDEKEELGERGSSSDGFDQVIAHE----------- 210

Query: 355 REVMETFEFETFHSSAYCRNRIEERTPEFSPNIEESGFKQPRRDSERYDHTQPPF----- 519
              +E F +   H      +         S   +E+  +QP   S   D  + PF     
Sbjct: 211 ETALEQFGWIEEHGLRQPGDSPSPEVVHCSGKTQENAMRQPADLSTSKDEHRSPFCLIDS 270

Query: 520 PIKSPEAVIPETFERDIVPLSE 585
           P+++       T ++D   LS+
Sbjct: 271 PVRTSSHSTEGTLDKDTSGLSK 292


>ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203492 [Cucumis sativus]
           gi|449471301|ref|XP_004153269.1| PREDICTED:
           uncharacterized protein LOC101204996 [Cucumis sativus]
           gi|449506301|ref|XP_004162709.1| PREDICTED:
           uncharacterized protein LOC101229010 [Cucumis sativus]
          Length = 395

 Score =  134 bits (336), Expect = 4e-29
 Identities = 99/311 (31%), Positives = 143/311 (45%), Gaps = 41/311 (13%)
 Frame = +1

Query: 1   LVVRKAAVAFKSLSGIANKIKLAYTMLTLPTWQSLSLTVNFFSTQYKKHCAGCPSLPEHM 180
           L VR AA  FKSLSG+ANK+KLAYTMLTLP W+ L++TVN+FST++ K+ AGCPSLPEHM
Sbjct: 111 LAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHM 170

Query: 181 NVQVCSMDELPCYTRSDQNVYQNEELDIEECEGIANGTGYSNLAEHEYRECVEAGGDCRE 360
            VQV  ++ELPCY+  DQ++ +NE                    + EY          RE
Sbjct: 171 KVQVSPINELPCYSEGDQDMLENE-------------------GDWEYN---------RE 202

Query: 361 VMETFEFETFHSSAYCRNRIEERTPEFSPNIEESGFKQPRR-DSERYDHTQPPFPIKSPE 537
             E   F  + S     N + ++  ++    +       R  D E   + Q P    +P 
Sbjct: 203 REEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPS 262

Query: 538 AVIP-------------ETFERDIVPLSEAC-------SSVELDWSSRKDLQTRAAIVED 657
            +               E  ER+     ++C       + + +D      L+  +  +++
Sbjct: 263 YIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQLEGSSMNLQE 322

Query: 658 KPLIKSST------------------VLCDVEVIDVFTPEPSYGISLQPKKRRI--DYSE 777
           +P  ++ T                     + EVIDV TP P    S    KRR+    SE
Sbjct: 323 QPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSE 382

Query: 778 IIDLTKSPIFL 810
           +IDLTKSP F+
Sbjct: 383 MIDLTKSPTFI 393


>ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|222862530|gb|EEF00037.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  125 bits (313), Expect = 2e-26
 Identities = 59/90 (65%), Positives = 74/90 (82%)
 Frame = +1

Query: 1   LVVRKAAVAFKSLSGIANKIKLAYTMLTLPTWQSLSLTVNFFSTQYKKHCAGCPSLPEHM 180
           + VR+AA AFKS SG+ANKIKLAYTML LP+WQSL++TVN+FSTQYK H AGCPSLP++M
Sbjct: 105 VAVRQAAAAFKSFSGVANKIKLAYTMLNLPSWQSLNITVNYFSTQYKVHSAGCPSLPKNM 164

Query: 181 NVQVCSMDELPCYTRSDQNVYQNEELDIEE 270
            VQ+C M+ELPCY+    N++  EE D E+
Sbjct: 165 KVQICPMNELPCYSDFVDNLF--EERDDED 192


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