BLASTX nr result

ID: Panax21_contig00023080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023080
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   329   2e-88
emb|CBI29971.3| unnamed protein product [Vitis vinifera]              328   2e-88
ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   328   2e-88
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   328   4e-88
ref|XP_003601625.1| DEAD-box ATP-dependent RNA helicase [Medicag...   325   2e-87

>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 614

 Score =  329 bits (843), Expect = 2e-88
 Identities = 162/176 (92%), Positives = 171/176 (97%)
 Frame = -3

Query: 528 GSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLEYWLC 349
           GSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANG  GKQALTLVFVETKKGADSLE+WLC
Sbjct: 376 GSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLC 435

Query: 348 SNGFPATTIHGDRTQQEREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDI 169
            NGFPATTIHGDR+QQERE ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDI
Sbjct: 436 LNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDI 495

Query: 168 DDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEANQEVPAWLARFAARA 1
           DDYVHRIGRTGRAGK GLATAFFN+NN+S+AR+LSELMQEANQEVPAWL+RFAAR+
Sbjct: 496 DDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSELMQEANQEVPAWLSRFAARS 551


>emb|CBI29971.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  328 bits (842), Expect = 2e-88
 Identities = 160/176 (90%), Positives = 171/176 (97%)
 Frame = -3

Query: 528 GSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLEYWLC 349
           GSSTDLIVQRVE+V ESDKRSHLMDLLHAQRANGAHGKQ+LTLVFVETKKGADSLE+WLC
Sbjct: 159 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAHGKQSLTLVFVETKKGADSLEHWLC 218

Query: 348 SNGFPATTIHGDRTQQEREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDI 169
            NGFPATTIHGDRTQQERE ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDI
Sbjct: 219 MNGFPATTIHGDRTQQEREHALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDI 278

Query: 168 DDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEANQEVPAWLARFAARA 1
           DDYVHRIGRTGRAGK+GLATAFFNENN+S+AR L++LMQEANQEVPAWL R+A+RA
Sbjct: 279 DDYVHRIGRTGRAGKTGLATAFFNENNSSLARPLADLMQEANQEVPAWLTRYASRA 334


>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 622

 Score =  328 bits (842), Expect = 2e-88
 Identities = 160/176 (90%), Positives = 171/176 (97%)
 Frame = -3

Query: 528 GSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLEYWLC 349
           GSSTDLIVQRVE+V ESDKRSHLMDLLHAQRANGAHGKQ+LTLVFVETKKGADSLE+WLC
Sbjct: 384 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAHGKQSLTLVFVETKKGADSLEHWLC 443

Query: 348 SNGFPATTIHGDRTQQEREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDI 169
            NGFPATTIHGDRTQQERE ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDI
Sbjct: 444 MNGFPATTIHGDRTQQEREHALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDI 503

Query: 168 DDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEANQEVPAWLARFAARA 1
           DDYVHRIGRTGRAGK+GLATAFFNENN+S+AR L++LMQEANQEVPAWL R+A+RA
Sbjct: 504 DDYVHRIGRTGRAGKTGLATAFFNENNSSLARPLADLMQEANQEVPAWLTRYASRA 559


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 619

 Score =  328 bits (840), Expect = 4e-88
 Identities = 161/176 (91%), Positives = 171/176 (97%)
 Frame = -3

Query: 528 GSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLEYWLC 349
           GSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANG  GKQALTLVFVETKKGADSLE+WLC
Sbjct: 381 GSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLC 440

Query: 348 SNGFPATTIHGDRTQQEREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDI 169
            NGFPATTIHGDR+QQERE ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDI
Sbjct: 441 LNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDI 500

Query: 168 DDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEANQEVPAWLARFAARA 1
           DDYVHRIGRTGRAGK GLATAFFN+NN+S+AR+LSELMQEANQEVPAWL+R+AAR+
Sbjct: 501 DDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSELMQEANQEVPAWLSRYAARS 556


>ref|XP_003601625.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355490673|gb|AES71876.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score =  325 bits (834), Expect = 2e-87
 Identities = 161/176 (91%), Positives = 168/176 (95%)
 Frame = -3

Query: 528 GSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLEYWLC 349
           GSSTDLI QRVEYVQESDKRSHLMDLLHAQRANG  GKQALTLVFVETKKGAD+LE+WLC
Sbjct: 366 GSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLC 425

Query: 348 SNGFPATTIHGDRTQQEREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDI 169
            N FPATTIHGDR+QQERE ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDI
Sbjct: 426 LNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDI 485

Query: 168 DDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEANQEVPAWLARFAARA 1
           DDYVHRIGRTGRAGK GLATAFFNENNTSMARSL +LMQEANQEVPAWL+RFAAR+
Sbjct: 486 DDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLSRFAARS 541


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