BLASTX nr result

ID: Panax21_contig00023047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023047
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e...   150   1e-34
gb|ABF98227.1| retrotransposon protein, putative, unclassified [...   150   1e-34
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]     150   1e-34
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]   147   1e-33
emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]   145   3e-33

>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 335

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/144 (50%), Positives = 101/144 (70%)
 Frame = +3

Query: 63  QLVKVLKENLELAQHRMKQQVDQHRSEREFQVGDYVYLKLQPYRQTSXXXXXXXXXXXXY 242
           Q+++ LK NL  AQ RMK   D+ R+ER+FQVGD VYLK+QPYR T+            +
Sbjct: 183 QMLEQLKSNLHNAQDRMKHYADKSRTERQFQVGDMVYLKMQPYRLTAFGLRGSLKLRSKF 242

Query: 243 FGPYLVVARIGKVAYKLELPEDSKIHPVFHVSLLKKQLGNQAVVQTKLPLVGDKGEMRIL 422
           +GP+ V+ ++G VAY+L+LPE + IHPVFHV+ LKK LG+ AV  T LPLVG+ G+++  
Sbjct: 243 YGPFRVLEKLGTVAYRLQLPEHTLIHPVFHVNQLKKHLGSHAVPLTGLPLVGENGKIKTE 302

Query: 423 PEKVLERRMIKKNNRPVIQMLIKW 494
           P  VL+RR++ + N PV Q+LI+W
Sbjct: 303 PVVVLDRRIVPRRNEPVAQLLIQW 326


>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1160

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/139 (53%), Positives = 97/139 (69%)
 Frame = +3

Query: 78   LKENLELAQHRMKQQVDQHRSEREFQVGDYVYLKLQPYRQTSXXXXXXXXXXXXYFGPYL 257
            LKENL  AQ R+K+ VD+ RSER+F++GD VYLK+QPYRQ +            ++GP+ 
Sbjct: 997  LKENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGLRGSLKLRAKFYGPFR 1056

Query: 258  VVARIGKVAYKLELPEDSKIHPVFHVSLLKKQLGNQAVVQTKLPLVGDKGEMRILPEKVL 437
            V+ +IGKVAYKL+LPE++ IHPVFHVS LKK +G QA+    LPLVG  G ++  P  VL
Sbjct: 1057 VLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVL 1116

Query: 438  ERRMIKKNNRPVIQMLIKW 494
             RR+I + N PV+Q LI W
Sbjct: 1117 ARRVIPRQNEPVVQWLIHW 1135


>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1246

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/139 (53%), Positives = 97/139 (69%)
 Frame = +3

Query: 78   LKENLELAQHRMKQQVDQHRSEREFQVGDYVYLKLQPYRQTSXXXXXXXXXXXXYFGPYL 257
            LKENL  AQ R+K+ VD+ RSER+F++GD VYLK+QPYRQ +            ++GP+ 
Sbjct: 1083 LKENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGLRGSLKLRAKFYGPFR 1142

Query: 258  VVARIGKVAYKLELPEDSKIHPVFHVSLLKKQLGNQAVVQTKLPLVGDKGEMRILPEKVL 437
            V+ +IGKVAYKL+LPE++ IHPVFHVS LKK +G QA+    LPLVG  G ++  P  VL
Sbjct: 1143 VLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVL 1202

Query: 438  ERRMIKKNNRPVIQMLIKW 494
             RR+I + N PV+Q LI W
Sbjct: 1203 ARRVIPRQNEPVVQWLIHW 1221


>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
          Length = 1384

 Score =  147 bits (370), Expect = 1e-33
 Identities = 76/159 (47%), Positives = 100/159 (62%)
 Frame = +3

Query: 18   TSNVAAMTDFFHRHNQLVKVLKENLELAQHRMKQQVDQHRSEREFQVGDYVYLKLQPYRQ 197
            T+ + A+       N +++ LK NL  A +RMKQ  D  R   E+QVGD V+LKLQPYRQ
Sbjct: 1172 TTPIHAVDQNLASRNAILRQLKTNLHAATNRMKQVADSKRRNIEYQVGDMVFLKLQPYRQ 1231

Query: 198  TSXXXXXXXXXXXXYFGPYLVVARIGKVAYKLELPEDSKIHPVFHVSLLKKQLGNQAVVQ 377
             S            ++GPY +  RIGKVAYKL LPE SKIHP+FHVSLLKK+LG      
Sbjct: 1232 QSVFCXASQKLASRFYGPYQIEQRIGKVAYKLNLPEGSKIHPIFHVSLLKKKLGEPNNTT 1291

Query: 378  TKLPLVGDKGEMRILPEKVLERRMIKKNNRPVIQMLIKW 494
             +LPL  D+GE+ + PE +L+ R +KK +R   + L+KW
Sbjct: 1292 VELPLTDDEGEIVLEPEGILDTRWVKKGSRIFEESLVKW 1330


>emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]
          Length = 1122

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/159 (46%), Positives = 100/159 (62%)
 Frame = +3

Query: 18   TSNVAAMTDFFHRHNQLVKVLKENLELAQHRMKQQVDQHRSEREFQVGDYVYLKLQPYRQ 197
            T+ V A+       + +++ LK NL +A +RMKQ  +  R   E+QVGD V+LKLQPYRQ
Sbjct: 851  TTPVHAVDQNLASRDAILRQLKTNLHVATNRMKQVANSKRRNIEYQVGDMVFLKLQPYRQ 910

Query: 198  TSXXXXXXXXXXXXYFGPYLVVARIGKVAYKLELPEDSKIHPVFHVSLLKKQLGNQAVVQ 377
             S            ++GPY +  RIGKVAYKL LPE SKIHP+FHVSLLKK+LG      
Sbjct: 911  QSVFCRASQKLASRFYGPYQIEQRIGKVAYKLNLPEGSKIHPIFHVSLLKKKLGEPNNTT 970

Query: 378  TKLPLVGDKGEMRILPEKVLERRMIKKNNRPVIQMLIKW 494
             +LPL  D+GE+ + PE +L+ R +KK +R   + L+KW
Sbjct: 971  VELPLTNDEGEIVLXPEGILDTRWVKKGSRIFEESLVKW 1009


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