BLASTX nr result

ID: Panax21_contig00023008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023008
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066778.1| Os12g0484700 [Oryza sativa Japonica Group] g...   178   4e-43
gb|ABA98518.1| Yippee-like protein At4g27740, putative [Oryza sa...   178   5e-43
ref|XP_002443187.1| hypothetical protein SORBIDRAFT_08g014870 [S...   177   6e-43
gb|AFK42973.1| unknown [Lotus japonicus]                              176   1e-42
ref|XP_003602285.1| LCR-like protein [Medicago truncatula] gi|35...   175   3e-42

>ref|NP_001066778.1| Os12g0484700 [Oryza sativa Japonica Group]
           gi|113649285|dbj|BAF29797.1| Os12g0484700 [Oryza sativa
           Japonica Group]
          Length = 109

 Score =  178 bits (452), Expect = 4e-43
 Identities = 82/97 (84%), Positives = 86/97 (88%), Gaps = 1/97 (1%)
 Frame = -2

Query: 289 ISMAEF-GPRLYSCCKCRNHVALHDDIISKTFQGRNGRAFLFSHAMNISVGCKEDRSLMT 113
           + MAE  GPR+YSCC CRNHV LHDDIISK FQGRNGRAFLFSHAMN+ VG KEDR LMT
Sbjct: 2   VFMAELVGPRVYSCCNCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNVVVGAKEDRQLMT 61

Query: 112 GLHTVADVYCGDCREVLGWKYERAYEATQKYKEGKFI 2
           GLHTVAD+YC DCREVLGWKYERAYE TQKYKEGKFI
Sbjct: 62  GLHTVADIYCNDCREVLGWKYERAYEETQKYKEGKFI 98


>gb|ABA98518.1| Yippee-like protein At4g27740, putative [Oryza sativa Japonica
           Group] gi|125536637|gb|EAY83125.1| hypothetical protein
           OsI_38341 [Oryza sativa Indica Group]
           gi|125579350|gb|EAZ20496.1| hypothetical protein
           OsJ_36103 [Oryza sativa Japonica Group]
           gi|215768213|dbj|BAH00442.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 106

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/95 (86%), Positives = 85/95 (89%), Gaps = 1/95 (1%)
 Frame = -2

Query: 283 MAEF-GPRLYSCCKCRNHVALHDDIISKTFQGRNGRAFLFSHAMNISVGCKEDRSLMTGL 107
           MAE  GPR+YSCC CRNHV LHDDIISK FQGRNGRAFLFSHAMN+ VG KEDR LMTGL
Sbjct: 1   MAELVGPRVYSCCNCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNVVVGAKEDRQLMTGL 60

Query: 106 HTVADVYCGDCREVLGWKYERAYEATQKYKEGKFI 2
           HTVAD+YC DCREVLGWKYERAYE TQKYKEGKFI
Sbjct: 61  HTVADIYCNDCREVLGWKYERAYEETQKYKEGKFI 95


>ref|XP_002443187.1| hypothetical protein SORBIDRAFT_08g014870 [Sorghum bicolor]
           gi|241943880|gb|EES17025.1| hypothetical protein
           SORBIDRAFT_08g014870 [Sorghum bicolor]
          Length = 106

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/95 (86%), Positives = 85/95 (89%), Gaps = 1/95 (1%)
 Frame = -2

Query: 283 MAEF-GPRLYSCCKCRNHVALHDDIISKTFQGRNGRAFLFSHAMNISVGCKEDRSLMTGL 107
           MAE  GPR+YSCC CRNHV LHDDIISK FQGRNGRAFLFSHAMN+ VG KEDR LMTGL
Sbjct: 1   MAELVGPRVYSCCTCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNVVVGAKEDRQLMTGL 60

Query: 106 HTVADVYCGDCREVLGWKYERAYEATQKYKEGKFI 2
           HTVAD+YC DCREVLGWKYERAYE TQKYKEGKFI
Sbjct: 61  HTVADIYCNDCREVLGWKYERAYEETQKYKEGKFI 95


>gb|AFK42973.1| unknown [Lotus japonicus]
          Length = 106

 Score =  176 bits (447), Expect = 1e-42
 Identities = 79/90 (87%), Positives = 84/90 (93%)
 Frame = -2

Query: 271 GPRLYSCCKCRNHVALHDDIISKTFQGRNGRAFLFSHAMNISVGCKEDRSLMTGLHTVAD 92
           GPRLYSCC CRNHV+LHDDIISK FQG+NGRAFLFSHAMN+  G KEDR L+TGLHTVAD
Sbjct: 6   GPRLYSCCNCRNHVSLHDDIISKAFQGKNGRAFLFSHAMNVVTGPKEDRHLLTGLHTVAD 65

Query: 91  VYCGDCREVLGWKYERAYEATQKYKEGKFI 2
           VYCGDCREVLGWKYERAYEA+QKYKEGKFI
Sbjct: 66  VYCGDCREVLGWKYERAYEASQKYKEGKFI 95


>ref|XP_003602285.1| LCR-like protein [Medicago truncatula] gi|355491333|gb|AES72536.1|
           LCR-like protein [Medicago truncatula]
           gi|388498602|gb|AFK37367.1| unknown [Medicago
           truncatula]
          Length = 106

 Score =  175 bits (444), Expect = 3e-42
 Identities = 82/95 (86%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = -2

Query: 283 MAEF-GPRLYSCCKCRNHVALHDDIISKTFQGRNGRAFLFSHAMNISVGCKEDRSLMTGL 107
           MAEF  PRLY CC CRNHV+LHDDIISK FQGRNGRAFLFSHAMN+  G KEDR L+TGL
Sbjct: 1   MAEFIVPRLYCCCNCRNHVSLHDDIISKAFQGRNGRAFLFSHAMNVVTGPKEDRHLLTGL 60

Query: 106 HTVADVYCGDCREVLGWKYERAYEATQKYKEGKFI 2
           HTVADVYCGDCREVLGWKYERAYEA+QKYKEGKFI
Sbjct: 61  HTVADVYCGDCREVLGWKYERAYEASQKYKEGKFI 95


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