BLASTX nr result

ID: Panax21_contig00023007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023007
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519276.1| gibberellin 2-oxidase, putative [Ricinus com...   196   1e-48
gb|AAQ93035.1| gibberellin 2-oxidase [Populus alba x Populus tre...   190   9e-47
dbj|BAD30039.1| gibberellin 2-oxidase2 [Daucus carota]                187   1e-45
ref|XP_002312310.1| gibberellin 2-oxidase [Populus trichocarpa] ...   184   5e-45
gb|AAT92093.1| GA 2-oxidase 1 [Nerium oleander]                       184   6e-45

>ref|XP_002519276.1| gibberellin 2-oxidase, putative [Ricinus communis]
           gi|223541591|gb|EEF43140.1| gibberellin 2-oxidase,
           putative [Ricinus communis]
          Length = 346

 Score =  196 bits (499), Expect = 1e-48
 Identities = 102/147 (69%), Positives = 113/147 (76%), Gaps = 15/147 (10%)
 Frame = -1

Query: 398 AVSGYVEAVRGVACEILELMAEGLGVPDTSVFSRLIRDVDSDSLLRLNHYPPLT------ 237
           AVSGY+EAVRGVACEIL+LMAEGLGVPDTSVFSRLIRDV+SDS+LRLNHYP +       
Sbjct: 131 AVSGYIEAVRGVACEILDLMAEGLGVPDTSVFSRLIRDVESDSILRLNHYPSIPTAAATT 190

Query: 236 ---------RDTSPAXXXXXXXXXXXXTNRIGFGEHSDPQILTILRSNGVAGLQISLEDG 84
                    +DTSP+             NR+GFGEH+DPQILT+L SN V GLQISL DG
Sbjct: 191 ILCTSNSRDKDTSPSYNN----------NRVGFGEHTDPQILTLLTSNDVGGLQISLNDG 240

Query: 83  VWVPVTPDPTAFCVNVGDVLQAMTNGR 3
           VWVPV+PDPTAFCVNVGDVLQAMTNGR
Sbjct: 241 VWVPVSPDPTAFCVNVGDVLQAMTNGR 267


>gb|AAQ93035.1| gibberellin 2-oxidase [Populus alba x Populus tremuloides]
          Length = 335

 Score =  190 bits (483), Expect = 9e-47
 Identities = 95/132 (71%), Positives = 106/132 (80%)
 Frame = -1

Query: 398 AVSGYVEAVRGVACEILELMAEGLGVPDTSVFSRLIRDVDSDSLLRLNHYPPLTRDTSPA 219
           A+SGY+EAVR +ACE+L+LMAEGL VPD SVFSRLIRD DSDS++RLNHYPP+     P 
Sbjct: 129 AMSGYIEAVRELACELLDLMAEGLWVPDRSVFSRLIRDDDSDSIIRLNHYPPM-----PI 183

Query: 218 XXXXXXXXXXXXTNRIGFGEHSDPQILTILRSNGVAGLQISLEDGVWVPVTPDPTAFCVN 39
                        NR+GFGEHSDPQILTILRSN V GLQISL DGVWVPVTPDP+AFCVN
Sbjct: 184 LCKDKDSSSPCNHNRVGFGEHSDPQILTILRSNDVGGLQISLNDGVWVPVTPDPSAFCVN 243

Query: 38  VGDVLQAMTNGR 3
           VGD+LQAMTNGR
Sbjct: 244 VGDLLQAMTNGR 255


>dbj|BAD30039.1| gibberellin 2-oxidase2 [Daucus carota]
          Length = 347

 Score =  187 bits (474), Expect = 1e-45
 Identities = 101/145 (69%), Positives = 107/145 (73%), Gaps = 12/145 (8%)
 Frame = -1

Query: 401 CAVSGYVEAVRGVACEILELMAEGLGVPDTSVFSRLIRDVDSDSLLRLNHYPPLTR---- 234
           CAV  YVEAVR V CE+LE+MAEGLGVPDTSVFS LI  VD+DSLLRLNHYPPL      
Sbjct: 123 CAVRVYVEAVRRVGCEVLEMMAEGLGVPDTSVFSSLITHVDNDSLLRLNHYPPLLPPHHF 182

Query: 233 --------DTSPAXXXXXXXXXXXXTNRIGFGEHSDPQILTILRSNGVAGLQISLEDGVW 78
                   DTS A             NRIGFGEH+DPQILTILRSNGVAGLQISL DGVW
Sbjct: 183 HTNNLTHYDTSSAPSFPQQLNAGKN-NRIGFGEHTDPQILTILRSNGVAGLQISLGDGVW 241

Query: 77  VPVTPDPTAFCVNVGDVLQAMTNGR 3
           VP++PD TA CVNVGDVLQAMTNGR
Sbjct: 242 VPISPDXTALCVNVGDVLQAMTNGR 266


>ref|XP_002312310.1| gibberellin 2-oxidase [Populus trichocarpa]
           gi|222852130|gb|EEE89677.1| gibberellin 2-oxidase
           [Populus trichocarpa]
          Length = 322

 Score =  184 bits (468), Expect = 5e-45
 Identities = 96/142 (67%), Positives = 106/142 (74%), Gaps = 5/142 (3%)
 Frame = -1

Query: 413 ICNRCAVSGYVEAVRGVACEILELMAEGLGVPDTSVFSRLIRDVDSDSLLRLNHYPPLT- 237
           I    AVS Y+EAVR +ACE+L+LMAEGL VPD SVFSRLIRDVDSDSL+RLNHYPP+  
Sbjct: 112 IAESSAVSAYIEAVRELACELLDLMAEGLRVPDRSVFSRLIRDVDSDSLIRLNHYPPMPL 171

Query: 236 ----RDTSPAXXXXXXXXXXXXTNRIGFGEHSDPQILTILRSNGVAGLQISLEDGVWVPV 69
                D+SP              N++GFGEHSDPQILTILRSN V GLQISL DG WVPV
Sbjct: 172 LCKDEDSSPCNQ-----------NKVGFGEHSDPQILTILRSNDVGGLQISLNDGAWVPV 220

Query: 68  TPDPTAFCVNVGDVLQAMTNGR 3
           TPDP  F VNVGD+LQAMTNGR
Sbjct: 221 TPDPATFWVNVGDLLQAMTNGR 242


>gb|AAT92093.1| GA 2-oxidase 1 [Nerium oleander]
          Length = 339

 Score =  184 bits (467), Expect = 6e-45
 Identities = 96/136 (70%), Positives = 110/136 (80%), Gaps = 4/136 (2%)
 Frame = -1

Query: 398 AVSGYVEAVRGVACEILELMAEGLGVPDTSVFSRLIRDVDSDSLLRLNHYPPL--TRDTS 225
           AVS YV AVR +ACEIL+L+ EGL VPDTSVFS+LI+DV+SDSLLRLNHYPPL   RDTS
Sbjct: 127 AVSSYVAAVRELACEILDLIGEGLRVPDTSVFSKLIKDVESDSLLRLNHYPPLHRDRDTS 186

Query: 224 PAXXXXXXXXXXXXTN--RIGFGEHSDPQILTILRSNGVAGLQISLEDGVWVPVTPDPTA 51
           P+             +  RIGFGEH+DPQILTIL+SN VAGLQIS+++G+WVPVTP PTA
Sbjct: 187 PSSLHHHVRHNPPHQSNSRIGFGEHTDPQILTILKSNAVAGLQISVDEGIWVPVTPHPTA 246

Query: 50  FCVNVGDVLQAMTNGR 3
           F VNVGDVLQAMTNGR
Sbjct: 247 FFVNVGDVLQAMTNGR 262


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