BLASTX nr result

ID: Panax21_contig00021940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021940
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264803.2| PREDICTED: UPF0454 protein C12orf49 homolog ...   431   e-118
emb|CBI36657.3| unnamed protein product [Vitis vinifera]              430   e-118
gb|ABK94599.1| unknown [Populus trichocarpa]                          412   e-113
ref|XP_003537940.1| PREDICTED: uncharacterized protein LOC100782...   399   e-109
ref|XP_002332721.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108

>ref|XP_002264803.2| PREDICTED: UPF0454 protein C12orf49 homolog [Vitis vinifera]
          Length = 279

 Score =  431 bits (1108), Expect = e-118
 Identities = 203/275 (73%), Positives = 237/275 (86%), Gaps = 1/275 (0%)
 Frame = -1

Query: 939 KMLNIRLYSSLIILFQSQILYFSSPISAIRLDVSLQEKQICRTTVQGRYLLSDDNGYVCD 760
           +M N RL  SL+  F   I+   S +SAIR D +L EK+ICRTTVQGRYL +DDNG+VCD
Sbjct: 6   RMSNSRLILSLLFRF-ILIIQILSRVSAIRKDPNLLEKRICRTTVQGRYLRTDDNGHVCD 64

Query: 759 ALSLDTKSRCCRGQGEQYSCHGCNLESHCCNSYEFCVSCCLSPARTQKDLALKVKISKPL 580
           ALS+D +S CC G+ EQ+SCHGCNL S CCNSYEFCVSCCL+PARTQK+LALKVK++KP+
Sbjct: 65  ALSMDPQSGCCFGKREQFSCHGCNLISQCCNSYEFCVSCCLNPARTQKELALKVKMAKPV 124

Query: 579 TAGTYSSVFDFCAGRCRHNSESVVHENAYFSDFHHCFALPSN-ISGITNTHSEVRLGGIN 403
           TAG Y+SVFDFC GRCRHNSESVVHENAY SDFHHCF+LPSN  +G  + + E+RL GI+
Sbjct: 125 TAGAYASVFDFCTGRCRHNSESVVHENAYLSDFHHCFSLPSNSTAGGVDRNPELRLNGIH 184

Query: 402 VIVGKQGESCDTVCKSNGQLCVPSKLVLLNQCEIMQKYMGCRGACLASIGADQPAEVVDD 223
           V+VG+QGESCD+VCKSNGQ CVPSKL +LNQCEIMQKYM C+GACLASIGADQPAEVVDD
Sbjct: 185 VVVGRQGESCDSVCKSNGQSCVPSKLSVLNQCEIMQKYMSCKGACLASIGADQPAEVVDD 244

Query: 222 APRYLNPGACLYTKQHSILSCNGSHKHTRRLCPCA 118
           APR+LNPGACLYT+  +ILSC+GSH+HTRRLCPCA
Sbjct: 245 APRHLNPGACLYTRTQTILSCDGSHQHTRRLCPCA 279


>emb|CBI36657.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  430 bits (1106), Expect = e-118
 Identities = 203/274 (74%), Positives = 236/274 (86%), Gaps = 1/274 (0%)
 Frame = -1

Query: 936 MLNIRLYSSLIILFQSQILYFSSPISAIRLDVSLQEKQICRTTVQGRYLLSDDNGYVCDA 757
           M N RL  SL+  F   I+   S +SAIR D +L EK+ICRTTVQGRYL +DDNG+VCDA
Sbjct: 1   MSNSRLILSLLFRF-ILIIQILSRVSAIRKDPNLLEKRICRTTVQGRYLRTDDNGHVCDA 59

Query: 756 LSLDTKSRCCRGQGEQYSCHGCNLESHCCNSYEFCVSCCLSPARTQKDLALKVKISKPLT 577
           LS+D +S CC G+ EQ+SCHGCNL S CCNSYEFCVSCCL+PARTQK+LALKVK++KP+T
Sbjct: 60  LSMDPQSGCCFGKREQFSCHGCNLISQCCNSYEFCVSCCLNPARTQKELALKVKMAKPVT 119

Query: 576 AGTYSSVFDFCAGRCRHNSESVVHENAYFSDFHHCFALPSN-ISGITNTHSEVRLGGINV 400
           AG Y+SVFDFC GRCRHNSESVVHENAY SDFHHCF+LPSN  +G  + + E+RL GI+V
Sbjct: 120 AGAYASVFDFCTGRCRHNSESVVHENAYLSDFHHCFSLPSNSTAGGVDRNPELRLNGIHV 179

Query: 399 IVGKQGESCDTVCKSNGQLCVPSKLVLLNQCEIMQKYMGCRGACLASIGADQPAEVVDDA 220
           +VG+QGESCD+VCKSNGQ CVPSKL +LNQCEIMQKYM C+GACLASIGADQPAEVVDDA
Sbjct: 180 VVGRQGESCDSVCKSNGQSCVPSKLSVLNQCEIMQKYMSCKGACLASIGADQPAEVVDDA 239

Query: 219 PRYLNPGACLYTKQHSILSCNGSHKHTRRLCPCA 118
           PR+LNPGACLYT+  +ILSC+GSH+HTRRLCPCA
Sbjct: 240 PRHLNPGACLYTRTQTILSCDGSHQHTRRLCPCA 273


>gb|ABK94599.1| unknown [Populus trichocarpa]
          Length = 268

 Score =  412 bits (1058), Expect = e-113
 Identities = 194/273 (71%), Positives = 222/273 (81%)
 Frame = -1

Query: 936 MLNIRLYSSLIILFQSQILYFSSPISAIRLDVSLQEKQICRTTVQGRYLLSDDNGYVCDA 757
           M    L   L+ILFQ     FSS ISAIR D+  ++ + CR TVQGRYLLSDDNGYVCDA
Sbjct: 1   MTKYHLSLQLLILFQ-----FSSIISAIRKDIGFEQSRSCRNTVQGRYLLSDDNGYVCDA 55

Query: 756 LSLDTKSRCCRGQGEQYSCHGCNLESHCCNSYEFCVSCCLSPARTQKDLALKVKISKPLT 577
           LS+D  SRCC   G ++SC GCNL S CCNSYEFCVSCCL P+RTQ+   LKVKI+KP T
Sbjct: 56  LSVDPPSRCCPENGLRFSCQGCNLVSQCCNSYEFCVSCCLHPSRTQEAQVLKVKIAKPST 115

Query: 576 AGTYSSVFDFCAGRCRHNSESVVHENAYFSDFHHCFALPSNISGITNTHSEVRLGGINVI 397
           A +Y+SVFDFCAGRCRHNSESVVHENAY SDFHHCF+LPSN SG   T  E RLGGINV+
Sbjct: 116 AVSYTSVFDFCAGRCRHNSESVVHENAYRSDFHHCFSLPSNSSGANYTQLEARLGGINVV 175

Query: 396 VGKQGESCDTVCKSNGQLCVPSKLVLLNQCEIMQKYMGCRGACLASIGADQPAEVVDDAP 217
           +GKQGESCD+VCKSNGQ CV +KL++LNQC++MQKYM C+G CLASIG DQPAEVV+DAP
Sbjct: 176 IGKQGESCDSVCKSNGQSCVLNKLLVLNQCDVMQKYMSCKGGCLASIGTDQPAEVVEDAP 235

Query: 216 RYLNPGACLYTKQHSILSCNGSHKHTRRLCPCA 118
           R+LNPGACLYT+  S+LSC+GS  HTRRLCPCA
Sbjct: 236 RHLNPGACLYTRTQSLLSCDGSLWHTRRLCPCA 268


>ref|XP_003537940.1| PREDICTED: uncharacterized protein LOC100782588 [Glycine max]
          Length = 281

 Score =  399 bits (1025), Expect = e-109
 Identities = 184/265 (69%), Positives = 223/265 (84%)
 Frame = -1

Query: 912 SLIILFQSQILYFSSPISAIRLDVSLQEKQICRTTVQGRYLLSDDNGYVCDALSLDTKSR 733
           SL+IL    I +FSS I+AIR DV  Q    C+TTVQGRYLLSDDNGYVC+A S++++SR
Sbjct: 20  SLLILV---IFHFSSTITAIRKDVGFQIIHPCKTTVQGRYLLSDDNGYVCNAASVNSRSR 76

Query: 732 CCRGQGEQYSCHGCNLESHCCNSYEFCVSCCLSPARTQKDLALKVKISKPLTAGTYSSVF 553
           CC  +GE++SCHGCNL S CCNSYE+CVSCCL+PA   K+  LK+K++KP TA TYSSVF
Sbjct: 77  CCPQRGEKFSCHGCNLLSQCCNSYEYCVSCCLNPALISKEQVLKMKVAKPTTARTYSSVF 136

Query: 552 DFCAGRCRHNSESVVHENAYFSDFHHCFALPSNISGITNTHSEVRLGGINVIVGKQGESC 373
           D+CAGRCRH+SESVVHENAY SDFHHCF+L SN SG  +T +E RL GINV+VG+QGESC
Sbjct: 137 DYCAGRCRHSSESVVHENAYISDFHHCFSLSSNSSGKNSTLTEARLSGINVVVGRQGESC 196

Query: 372 DTVCKSNGQLCVPSKLVLLNQCEIMQKYMGCRGACLASIGADQPAEVVDDAPRYLNPGAC 193
           ++VCKS GQ CVP+KLV+LN C+I+QKYM C+G+CLAS+GADQPAEVV DAP +LNPG+C
Sbjct: 197 NSVCKSRGQSCVPNKLVVLNSCDIIQKYMSCKGSCLASVGADQPAEVVYDAPVHLNPGSC 256

Query: 192 LYTKQHSILSCNGSHKHTRRLCPCA 118
           LYT+  SILSC+G H+HTRRLCPCA
Sbjct: 257 LYTETQSILSCDGLHQHTRRLCPCA 281


>ref|XP_002332721.1| predicted protein [Populus trichocarpa] gi|222832884|gb|EEE71361.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  397 bits (1019), Expect = e-108
 Identities = 180/245 (73%), Positives = 207/245 (84%)
 Frame = -1

Query: 852 RLDVSLQEKQICRTTVQGRYLLSDDNGYVCDALSLDTKSRCCRGQGEQYSCHGCNLESHC 673
           R D+  ++ + CR TVQGRYLLSDDNGYVCDALS+D  SRCC   G ++SC GCNL S C
Sbjct: 1   RKDIGFEQSRSCRNTVQGRYLLSDDNGYVCDALSVDPPSRCCPENGLRFSCQGCNLVSQC 60

Query: 672 CNSYEFCVSCCLSPARTQKDLALKVKISKPLTAGTYSSVFDFCAGRCRHNSESVVHENAY 493
           CNSYEFCVSCCL P+RTQ+   LKVKI+KP TA +Y+SVFDFCAGRCRHNSESVVHENAY
Sbjct: 61  CNSYEFCVSCCLHPSRTQEAQVLKVKIAKPSTAVSYTSVFDFCAGRCRHNSESVVHENAY 120

Query: 492 FSDFHHCFALPSNISGITNTHSEVRLGGINVIVGKQGESCDTVCKSNGQLCVPSKLVLLN 313
            SDFHHCF+LPSN SG   T  E RLGGINV++GKQGESCD+VCKSNGQ CV +KL++LN
Sbjct: 121 RSDFHHCFSLPSNSSGANYTQLEARLGGINVVIGKQGESCDSVCKSNGQSCVLNKLLVLN 180

Query: 312 QCEIMQKYMGCRGACLASIGADQPAEVVDDAPRYLNPGACLYTKQHSILSCNGSHKHTRR 133
           QC++MQKYM C+G CLASIG DQPAEVV+DAPR+LNPGACLYT+  S+LSC+GS  HTRR
Sbjct: 181 QCDVMQKYMSCKGGCLASIGTDQPAEVVEDAPRHLNPGACLYTRTQSLLSCDGSLWHTRR 240

Query: 132 LCPCA 118
           LCPCA
Sbjct: 241 LCPCA 245


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