BLASTX nr result

ID: Panax21_contig00018933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018933
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272565.1| PREDICTED: RNA-binding protein pno1-like [Vi...   382   e-104
ref|XP_004148267.1| PREDICTED: RNA-binding protein pno1-like [Cu...   378   e-102
ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Gl...   377   e-102
ref|XP_002299066.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
gb|ACU24003.1| unknown [Glycine max]                                  375   e-102

>ref|XP_002272565.1| PREDICTED: RNA-binding protein pno1-like [Vitis vinifera]
           gi|225455824|ref|XP_002272932.1| PREDICTED: RNA-binding
           protein pno1-like [Vitis vinifera]
          Length = 224

 Score =  382 bits (981), Expect = e-104
 Identities = 192/224 (85%), Positives = 208/224 (92%), Gaps = 2/224 (0%)
 Frame = +1

Query: 127 MQSSEGTTSMEIEKVSSDVKRVS--FASKPNFEPLKAHEISDGQVQFRKVSVPAHRYTPL 300
           MQS+E  TSME+E V S+    S  F SKP FEPLKAHE+S+G+VQFRKVSVP HRYTPL
Sbjct: 1   MQSNEPATSMEVENVLSEPNPTSGTFPSKPKFEPLKAHEMSEGRVQFRKVSVPPHRYTPL 60

Query: 301 KKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRSDTPDISNLQKCADFVHAFMLGFDVID 480
           KKAWMEIYTP+YEQMKIDIRMNLKARKVELKTR+DTPDISNLQKC DFVHAFMLGF V+D
Sbjct: 61  KKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCTDFVHAFMLGFGVVD 120

Query: 481 AVALLRMDELYVESFEIKDVKTLRGQHLSRAIGRLSGKGGKTKFAIENSTKTRIVVADTK 660
           A+ALLR+DELYVESFEIKDVKTLRG+HLSRAIGRLSGKGGKTKFAIEN+T+TRIV+ADTK
Sbjct: 121 AIALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATRTRIVIADTK 180

Query: 661 IHIFGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 792
           IHI GSF+NIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Sbjct: 181 IHILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 224


>ref|XP_004148267.1| PREDICTED: RNA-binding protein pno1-like [Cucumis sativus]
          Length = 224

 Score =  378 bits (971), Expect = e-102
 Identities = 188/224 (83%), Positives = 209/224 (93%), Gaps = 2/224 (0%)
 Frame = +1

Query: 127 MQSSEGTTSMEIEKVSSDVKRV--SFASKPNFEPLKAHEISDGQVQFRKVSVPAHRYTPL 300
           MQS+E +TSM++E +S+  K V  +   KP F+PLK HE++DG+VQFRKVSVP HRY+PL
Sbjct: 1   MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 301 KKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRSDTPDISNLQKCADFVHAFMLGFDVID 480
           KKAWM+IYTP+Y+QMKIDIRMNLKARKVELKTR+DTPDISNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 120

Query: 481 AVALLRMDELYVESFEIKDVKTLRGQHLSRAIGRLSGKGGKTKFAIENSTKTRIVVADTK 660
           A+ALLR+DELYVESFEIKDVKTLRG+HLSRAIGRLSGK GKTKFAIEN+TKTRIV+ADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 661 IHIFGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 792
           IHI GSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 224


>ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  377 bits (968), Expect = e-102
 Identities = 187/222 (84%), Positives = 206/222 (92%)
 Frame = +1

Query: 127 MQSSEGTTSMEIEKVSSDVKRVSFASKPNFEPLKAHEISDGQVQFRKVSVPAHRYTPLKK 306
           M+S++  +SME+E V S+ K +    KP FEPLK HE+SDGQVQFRKV+VP HRYTPLKK
Sbjct: 1   MESNQAASSMEVETVPSEAKLLP--PKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKK 58

Query: 307 AWMEIYTPVYEQMKIDIRMNLKARKVELKTRSDTPDISNLQKCADFVHAFMLGFDVIDAV 486
           AWM+IYTP+YEQMKID+RMNLKAR+VELKTR DTPDISNLQKCADFVHAFMLGFDVIDA+
Sbjct: 59  AWMDIYTPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAI 118

Query: 487 ALLRMDELYVESFEIKDVKTLRGQHLSRAIGRLSGKGGKTKFAIENSTKTRIVVADTKIH 666
           ALLR+DELY+ESFEIKDVKTLRG HLSRAIGRLSGKGGKTKFAIEN++KTRIV+ADTKIH
Sbjct: 119 ALLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIH 178

Query: 667 IFGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 792
           I GSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Sbjct: 179 ILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 220


>ref|XP_002299066.1| predicted protein [Populus trichocarpa] gi|222846324|gb|EEE83871.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  376 bits (965), Expect = e-102
 Identities = 189/223 (84%), Positives = 205/223 (91%), Gaps = 1/223 (0%)
 Frame = +1

Query: 127 MQSSEGTTSMEIEKVSSDVKRV-SFASKPNFEPLKAHEISDGQVQFRKVSVPAHRYTPLK 303
           MQSS+    ME+E    + K   +  +KP FEPLKAHE+SDG+VQFRKVSVP+HRY+PLK
Sbjct: 1   MQSSKAPAPMEVEIAPREQKSEGTLPAKPKFEPLKAHEMSDGRVQFRKVSVPSHRYSPLK 60

Query: 304 KAWMEIYTPVYEQMKIDIRMNLKARKVELKTRSDTPDISNLQKCADFVHAFMLGFDVIDA 483
           KAWMEIYTPVYEQMKIDIRMNLKARKVELKTRSDTPD+SNLQKCADFVHAFMLGFDVIDA
Sbjct: 61  KAWMEIYTPVYEQMKIDIRMNLKARKVELKTRSDTPDVSNLQKCADFVHAFMLGFDVIDA 120

Query: 484 VALLRMDELYVESFEIKDVKTLRGQHLSRAIGRLSGKGGKTKFAIENSTKTRIVVADTKI 663
           +ALLR+DELYVESFEIKDVKTLRG+HLSRAIGRLSGKGGKTKFAIEN+TKTRIV+ADTKI
Sbjct: 121 IALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADTKI 180

Query: 664 HIFGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 792
           HI GSF NIK+ARDSLCSLILGSPAGKVYSKLR VTARLAERF
Sbjct: 181 HILGSFQNIKVARDSLCSLILGSPAGKVYSKLRQVTARLAERF 223


>gb|ACU24003.1| unknown [Glycine max]
          Length = 220

 Score =  375 bits (964), Expect = e-102
 Identities = 187/222 (84%), Positives = 205/222 (92%)
 Frame = +1

Query: 127 MQSSEGTTSMEIEKVSSDVKRVSFASKPNFEPLKAHEISDGQVQFRKVSVPAHRYTPLKK 306
           M S++  +SME+E V S+ K +    KP FEPLK HE+SDGQVQFRKV+VP HRYTPLKK
Sbjct: 1   MGSNQAASSMEVETVPSEAKLLP--PKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKK 58

Query: 307 AWMEIYTPVYEQMKIDIRMNLKARKVELKTRSDTPDISNLQKCADFVHAFMLGFDVIDAV 486
           AWM+IYTP+YEQMKID+RMNLKAR+VELKTR DTPDISNLQKCADFVHAFMLGFDVIDA+
Sbjct: 59  AWMDIYTPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAI 118

Query: 487 ALLRMDELYVESFEIKDVKTLRGQHLSRAIGRLSGKGGKTKFAIENSTKTRIVVADTKIH 666
           ALLR+DELY+ESFEIKDVKTLRG HLSRAIGRLSGKGGKTKFAIEN++KTRIV+ADTKIH
Sbjct: 119 ALLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIH 178

Query: 667 IFGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 792
           I GSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Sbjct: 179 ILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 220


Top