BLASTX nr result

ID: Panax21_contig00018752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018752
         (1532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus...   450   e-124
ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|2...   446   e-123
ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|2...   442   e-121
ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembran...   436   e-120
emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]   436   e-120

>ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus communis]
            gi|223540902|gb|EEF42460.1| Transmembrane protein 45a,
            putative [Ricinus communis]
          Length = 278

 Score =  450 bits (1157), Expect = e-124
 Identities = 209/268 (77%), Positives = 236/268 (88%)
 Frame = -3

Query: 1011 MGSFAGHVLPGTLFLFVGVWHIWCSMVRYTSNPKSFRVRVWNPVPGFDGRLKYLELYLVA 832
            MGSF GH LPG+LFL VG+WHIWCS+VRY SNPK+FRVRVWNPVPGFDG+LKYLELYLVA
Sbjct: 1    MGSFKGHALPGSLFLLVGMWHIWCSLVRYVSNPKAFRVRVWNPVPGFDGKLKYLELYLVA 60

Query: 831  SGAFIDMCIELLYSTHLKFFVNGVLNPSHMNDFEHGGMLLMFFVYTVVILLSEKTSFLPL 652
             GAFID+CIELLYSTHLKFFV+GVLNPSHMNDFEH GMLLMFF++ VV LLSEKT FLPL
Sbjct: 61   VGAFIDLCIELLYSTHLKFFVDGVLNPSHMNDFEHSGMLLMFFIFGVVSLLSEKTRFLPL 120

Query: 651  PEGALCFIAATAFCAEYLLFYFHSTTHKGLEGHYHXXXXXXVAFCILSTIAGALMPTSFP 472
            PEGALC +AATAFCAEYLLFYFHSTTHKGLEG+YH      +A CILST+AG L+PTSFP
Sbjct: 121  PEGALCLVAATAFCAEYLLFYFHSTTHKGLEGYYHLLLVLLIALCILSTVAGTLLPTSFP 180

Query: 471  ADLSSGIAIALQGLWFYQTAFTLYGPSMPDGCKLKGNMIACNSQDHEVRGQLLANFQLFS 292
             DLSSGIAI LQGLWFYQTAF+LYGP +PDGC+LK + + C S   +VRG+LLANFQLF+
Sbjct: 181  IDLSSGIAITLQGLWFYQTAFSLYGPMVPDGCQLKNDQVTCRSMASQVRGELLANFQLFA 240

Query: 291  IVLGVMVGVVGSYGFAAKRYGHVDIRSL 208
            +VLGV+VGVV SYGFAA +YG  D++SL
Sbjct: 241  LVLGVLVGVVVSYGFAASKYGRSDLQSL 268


>ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|222840894|gb|EEE78441.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  446 bits (1148), Expect = e-123
 Identities = 210/268 (78%), Positives = 229/268 (85%)
 Frame = -3

Query: 1011 MGSFAGHVLPGTLFLFVGVWHIWCSMVRYTSNPKSFRVRVWNPVPGFDGRLKYLELYLVA 832
            MGSF GH LPGTLFL VGVWHIW S+VRY SNPKSFRVRVWNPVPGFDG+L+YLELYLVA
Sbjct: 1    MGSFIGHALPGTLFLLVGVWHIWSSLVRYVSNPKSFRVRVWNPVPGFDGKLEYLELYLVA 60

Query: 831  SGAFIDMCIELLYSTHLKFFVNGVLNPSHMNDFEHGGMLLMFFVYTVVILLSEKTSFLPL 652
             GAFIDMCIE+LYSTHLKFF+NGVLNP HMNDFEHGGMLLMFF++ VV LLSEKT FLPL
Sbjct: 61   GGAFIDMCIEVLYSTHLKFFINGVLNPHHMNDFEHGGMLLMFFIFGVVSLLSEKTRFLPL 120

Query: 651  PEGALCFIAATAFCAEYLLFYFHSTTHKGLEGHYHXXXXXXVAFCILSTIAGALMPTSFP 472
            PEGALC +AA AF AEYLLFYFHSTTHKGLEGHYH      +  C+LS  AGAL+ TSFP
Sbjct: 121  PEGALCLVAAAAFSAEYLLFYFHSTTHKGLEGHYHLLLVLLIGLCVLSVAAGALLRTSFP 180

Query: 471  ADLSSGIAIALQGLWFYQTAFTLYGPSMPDGCKLKGNMIACNSQDHEVRGQLLANFQLFS 292
             DLSSGIAI LQGLWFYQTAFTLYGP MP+GC+LKG+ I C S D  VRG+LLANFQLFS
Sbjct: 181  VDLSSGIAITLQGLWFYQTAFTLYGPMMPNGCQLKGDQIVCRSSDSLVRGELLANFQLFS 240

Query: 291  IVLGVMVGVVGSYGFAAKRYGHVDIRSL 208
            +V GV+V V  SYGFAA RYGH D++SL
Sbjct: 241  LVFGVLVTVAASYGFAASRYGHSDLKSL 268


>ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|222833901|gb|EEE72378.1|
            predicted protein [Populus trichocarpa]
          Length = 265

 Score =  442 bits (1137), Expect = e-121
 Identities = 205/265 (77%), Positives = 225/265 (84%)
 Frame = -3

Query: 1011 MGSFAGHVLPGTLFLFVGVWHIWCSMVRYTSNPKSFRVRVWNPVPGFDGRLKYLELYLVA 832
            MGSF GH LPGTLFL VGVWHIW S+VRY SNPKSFRVRVWNPVPGFDG+LKYLELYLVA
Sbjct: 1    MGSFKGHALPGTLFLLVGVWHIWSSLVRYLSNPKSFRVRVWNPVPGFDGKLKYLELYLVA 60

Query: 831  SGAFIDMCIELLYSTHLKFFVNGVLNPSHMNDFEHGGMLLMFFVYTVVILLSEKTSFLPL 652
             GAFIDMCIELLYSTHLKFFVNGVLNP HMNDFEHGGMLLMFF++  V LLSEKTSFLPL
Sbjct: 61   GGAFIDMCIELLYSTHLKFFVNGVLNPHHMNDFEHGGMLLMFFIFGAVGLLSEKTSFLPL 120

Query: 651  PEGALCFIAATAFCAEYLLFYFHSTTHKGLEGHYHXXXXXXVAFCILSTIAGALMPTSFP 472
            PEG LC +AA AF AEYLLFYFHSTTHKGLEGHYH      +  C+LS + GAL+PT+FP
Sbjct: 121  PEGVLCLVAAAAFSAEYLLFYFHSTTHKGLEGHYHLLLVLLIGLCVLSIVTGALLPTNFP 180

Query: 471  ADLSSGIAIALQGLWFYQTAFTLYGPSMPDGCKLKGNMIACNSQDHEVRGQLLANFQLFS 292
             DLSSGIA+ LQGLWFYQTAF LYGP MPDGC+LKGN I C S + ++RG+LLA FQLFS
Sbjct: 181  VDLSSGIAMTLQGLWFYQTAFCLYGPMMPDGCQLKGNQIMCRSSESQIRGELLATFQLFS 240

Query: 291  IVLGVMVGVVGSYGFAAKRYGHVDI 217
            +V GV+V V  +YGFAA RYGH D+
Sbjct: 241  MVFGVLVAVAAAYGFAASRYGHSDL 265


>ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 45B-like [Vitis
            vinifera]
          Length = 278

 Score =  436 bits (1121), Expect = e-120
 Identities = 205/268 (76%), Positives = 231/268 (86%)
 Frame = -3

Query: 1011 MGSFAGHVLPGTLFLFVGVWHIWCSMVRYTSNPKSFRVRVWNPVPGFDGRLKYLELYLVA 832
            MGSF GHVLPGTLFL VG+WHIW ++VR+  NPK F+VRVWNPV GFDGRL+YLELY+VA
Sbjct: 1    MGSFMGHVLPGTLFLAVGLWHIWSAVVRFVMNPKGFQVRVWNPVSGFDGRLRYLELYVVA 60

Query: 831  SGAFIDMCIELLYSTHLKFFVNGVLNPSHMNDFEHGGMLLMFFVYTVVILLSEKTSFLPL 652
             GAFIDMCIELLYSTHL+FFVNGVLNPSHMNDFEH GMLLMFF++ VV LLS++T  +PL
Sbjct: 61   IGAFIDMCIELLYSTHLQFFVNGVLNPSHMNDFEHSGMLLMFFIFGVVALLSQQTGLVPL 120

Query: 651  PEGALCFIAATAFCAEYLLFYFHSTTHKGLEGHYHXXXXXXVAFCILSTIAGALMPTSFP 472
            PEGALC IAATAF AEY LFYFHSTTHKGLEG+YH      +  CILSTI GALMPTSFP
Sbjct: 121  PEGALCLIAATAFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFP 180

Query: 471  ADLSSGIAIALQGLWFYQTAFTLYGPSMPDGCKLKGNMIACNSQDHEVRGQLLANFQLFS 292
             DL  GIAIALQGLWFYQTAFTLYGP MP+GC+LK NMI+C+S +++VRG+LLANFQLF 
Sbjct: 181  VDLCCGIAIALQGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFI 240

Query: 291  IVLGVMVGVVGSYGFAAKRYGHVDIRSL 208
            I  GV+V VVGSYGFAA R+GH D+RSL
Sbjct: 241  IAFGVLVAVVGSYGFAASRFGHPDLRSL 268


>emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]
          Length = 301

 Score =  436 bits (1121), Expect = e-120
 Identities = 205/268 (76%), Positives = 231/268 (86%)
 Frame = -3

Query: 1011 MGSFAGHVLPGTLFLFVGVWHIWCSMVRYTSNPKSFRVRVWNPVPGFDGRLKYLELYLVA 832
            MGSF GHVLPGTLFL VG+WHIW ++VR+  NPK F+VRVWNPV GFDGRL+YLELY+VA
Sbjct: 1    MGSFMGHVLPGTLFLAVGLWHIWSAVVRFVMNPKGFQVRVWNPVSGFDGRLRYLELYVVA 60

Query: 831  SGAFIDMCIELLYSTHLKFFVNGVLNPSHMNDFEHGGMLLMFFVYTVVILLSEKTSFLPL 652
             GAFIDMCIELLYSTHL+FFVNGVLNPSHMNDFEH GMLLMFF++ VV LLS++T  +PL
Sbjct: 61   IGAFIDMCIELLYSTHLQFFVNGVLNPSHMNDFEHSGMLLMFFIFGVVALLSQQTGLVPL 120

Query: 651  PEGALCFIAATAFCAEYLLFYFHSTTHKGLEGHYHXXXXXXVAFCILSTIAGALMPTSFP 472
            PEGALC IAATAF AEY LFYFHSTTHKGLEG+YH      +  CILSTI GALMPTSFP
Sbjct: 121  PEGALCLIAATAFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFP 180

Query: 471  ADLSSGIAIALQGLWFYQTAFTLYGPSMPDGCKLKGNMIACNSQDHEVRGQLLANFQLFS 292
             DL  GIAIALQGLWFYQTAFTLYGP MP+GC+LK NMI+C+S +++VRG+LLANFQLF 
Sbjct: 181  VDLCCGIAIALQGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFI 240

Query: 291  IVLGVMVGVVGSYGFAAKRYGHVDIRSL 208
            I  GV+V VVGSYGFAA R+GH D+RSL
Sbjct: 241  IAFGVLVAVVGSYGFAASRFGHPDLRSL 268


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