BLASTX nr result

ID: Panax21_contig00018676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018676
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   372   e-101
emb|CBI19627.3| unnamed protein product [Vitis vinifera]              363   3e-98
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   363   3e-98
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]   361   1e-97
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...   355   9e-96

>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  372 bits (956), Expect = e-101
 Identities = 185/278 (66%), Positives = 224/278 (80%)
 Frame = +1

Query: 1   HLEIFNCLLKPPSTFDGFRSLKSLDLQHITMDQDVFEYLISGCALLERLTLMNFDGFSHL 180
           HLE+FNCLL+PP TF GFRSLKSLDLQHIT+ Q+VFE LI  C LLERLTLMNFDGF+HL
Sbjct: 149 HLELFNCLLQPPLTFKGFRSLKSLDLQHITLTQNVFENLIFSCPLLERLTLMNFDGFTHL 208

Query: 181 NIHAPNLLFFDIGGVFEDVNFDSTSNLAIVSIGLYVNTEYDETLPLVSTGNMIKFFAPLP 360
           NI+APNL FFDIGGV++DV F++T  L +VSIGLYVN + D  +   S+  +++FFA LP
Sbjct: 209 NINAPNLQFFDIGGVYDDVTFENTFQLTLVSIGLYVNVQNDRNVGHGSSSKLLRFFANLP 268

Query: 361 RIRRLEVQSLFLKYLAAGNVPKRLPTPSIELNYVSLRINFKDRAESLAALCILRSSPNLQ 540
            IRRLEVQS FLKYL+ GNVP RLP P  +LNY+S+RINF D  E+ AALC+LRSSPN+Q
Sbjct: 269 HIRRLEVQSYFLKYLSIGNVPSRLPKPCFDLNYLSIRINFNDLEENSAALCLLRSSPNVQ 328

Query: 541 ELEILTRLEEHAAVRTDARSWEEYYNNCSFSQLQLVKIAGISNVKWELNFINFLLANSPR 720
           ELE+L R EE  ++ T    WE+ + N  F QL+LV+I GIS ++ EL+F+NFLL+NSP 
Sbjct: 329 ELEMLARPEEQTSLGTITNFWEDDHWNNLFGQLRLVRIVGISGIRCELDFMNFLLSNSPV 388

Query: 721 LEKMTVKPASTDGAWELMKELLRFRRASVLAEIIYLDP 834
           LE+MTVKPAS+DG WEL+KELLRFRRAS  AEIIYLDP
Sbjct: 389 LERMTVKPASSDGGWELIKELLRFRRASARAEIIYLDP 426


>emb|CBI19627.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  363 bits (932), Expect = 3e-98
 Identities = 187/278 (67%), Positives = 219/278 (78%)
 Frame = +1

Query: 1   HLEIFNCLLKPPSTFDGFRSLKSLDLQHITMDQDVFEYLISGCALLERLTLMNFDGFSHL 180
           HLE+FN LLKPP TF GF SLKSLDLQHI M QD FE LIS C LLE+ TLMNFDGF+HL
Sbjct: 69  HLELFNSLLKPPPTFKGFMSLKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGFTHL 128

Query: 181 NIHAPNLLFFDIGGVFEDVNFDSTSNLAIVSIGLYVNTEYDETLPLVSTGNMIKFFAPLP 360
           NIHAPNL FFD GGVF DVNF +T  LA VSIGLYV+   D+ L   ++ N++KFFA LP
Sbjct: 129 NIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFAHLP 188

Query: 361 RIRRLEVQSLFLKYLAAGNVPKRLPTPSIELNYVSLRINFKDRAESLAALCILRSSPNLQ 540
           RI+RLE+QS FLKYLAAGNVP +LP P I+L ++S+RINF    E+L ALC+LRSSPNLQ
Sbjct: 189 RIQRLEIQSYFLKYLAAGNVPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQ 248

Query: 541 ELEILTRLEEHAAVRTDARSWEEYYNNCSFSQLQLVKIAGISNVKWELNFINFLLANSPR 720
           ELE+L R EE   + T    W++ + N SF+ L++VK+ GIS V  +L+FINFLLA SP 
Sbjct: 249 ELEMLARPEEQTLLETSTTLWKKEHWNYSFAHLRVVKLTGISGVGPQLDFINFLLAYSPV 308

Query: 721 LEKMTVKPASTDGAWELMKELLRFRRASVLAEIIYLDP 834
           LEKMTVKPAS DGAWEL+K+LLRFRRASV AEIIYLDP
Sbjct: 309 LEKMTVKPASGDGAWELIKDLLRFRRASVRAEIIYLDP 346


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score =  363 bits (932), Expect = 3e-98
 Identities = 187/278 (67%), Positives = 219/278 (78%)
 Frame = +1

Query: 1   HLEIFNCLLKPPSTFDGFRSLKSLDLQHITMDQDVFEYLISGCALLERLTLMNFDGFSHL 180
           HLE+FN LLKPP TF GF SLKSLDLQHI M QD FE LIS C LLE+ TLMNFDGF+HL
Sbjct: 139 HLELFNSLLKPPPTFKGFMSLKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGFTHL 198

Query: 181 NIHAPNLLFFDIGGVFEDVNFDSTSNLAIVSIGLYVNTEYDETLPLVSTGNMIKFFAPLP 360
           NIHAPNL FFD GGVF DVNF +T  LA VSIGLYV+   D+ L   ++ N++KFFA LP
Sbjct: 199 NIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFAHLP 258

Query: 361 RIRRLEVQSLFLKYLAAGNVPKRLPTPSIELNYVSLRINFKDRAESLAALCILRSSPNLQ 540
           RI+RLE+QS FLKYLAAGNVP +LP P I+L ++S+RINF    E+L ALC+LRSSPNLQ
Sbjct: 259 RIQRLEIQSYFLKYLAAGNVPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQ 318

Query: 541 ELEILTRLEEHAAVRTDARSWEEYYNNCSFSQLQLVKIAGISNVKWELNFINFLLANSPR 720
           ELE+L R EE   + T    W++ + N SF+ L++VK+ GIS V  +L+FINFLLA SP 
Sbjct: 319 ELEMLARPEEQTLLETSTTLWKKEHWNYSFAHLRVVKLTGISGVGPQLDFINFLLAYSPV 378

Query: 721 LEKMTVKPASTDGAWELMKELLRFRRASVLAEIIYLDP 834
           LEKMTVKPAS DGAWEL+K+LLRFRRASV AEIIYLDP
Sbjct: 379 LEKMTVKPASGDGAWELIKDLLRFRRASVRAEIIYLDP 416


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score =  361 bits (927), Expect = 1e-97
 Identities = 186/278 (66%), Positives = 218/278 (78%)
 Frame = +1

Query: 1   HLEIFNCLLKPPSTFDGFRSLKSLDLQHITMDQDVFEYLISGCALLERLTLMNFDGFSHL 180
           HLE+FN LLKPP TF GF SLKSLDLQHI M QD FE LIS C LLE+ TLMNFDGF+HL
Sbjct: 139 HLELFNSLLKPPPTFKGFXSLKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGFTHL 198

Query: 181 NIHAPNLLFFDIGGVFEDVNFDSTSNLAIVSIGLYVNTEYDETLPLVSTGNMIKFFAPLP 360
           NIHAPNL FFD GGVF DVNF +T  LA VSIGLYV+   D+ L   ++ N++KFFA LP
Sbjct: 199 NIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFAHLP 258

Query: 361 RIRRLEVQSLFLKYLAAGNVPKRLPTPSIELNYVSLRINFKDRAESLAALCILRSSPNLQ 540
           RI+RLE+QS FLKYLAAGNVP +LP P I+L ++S+RINF    E+L ALC+LRSSPNLQ
Sbjct: 259 RIQRLEIQSYFLKYLAAGNVPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQ 318

Query: 541 ELEILTRLEEHAAVRTDARSWEEYYNNCSFSQLQLVKIAGISNVKWELNFINFLLANSPR 720
           ELE+L R EE   + T    W++ + N  F+ L++VK+ GIS V  +L+FINFLLA SP 
Sbjct: 319 ELEMLARPEEQTLLETSTTLWKKEHWNYXFAHLRVVKLTGISGVGPQLDFINFLLAYSPV 378

Query: 721 LEKMTVKPASTDGAWELMKELLRFRRASVLAEIIYLDP 834
           LEKMTVKPAS DGAWEL+K+LLRFRRASV AEIIYLDP
Sbjct: 379 LEKMTVKPASGDGAWELIKDLLRFRRASVRAEIIYLDP 416


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  355 bits (911), Expect = 9e-96
 Identities = 175/278 (62%), Positives = 216/278 (77%)
 Frame = +1

Query: 1   HLEIFNCLLKPPSTFDGFRSLKSLDLQHITMDQDVFEYLISGCALLERLTLMNFDGFSHL 180
           HLE+FNCLLKPP  F GFR+LKSLDLQH+T+ Q+VFE LIS CALLERLTLMNFDGF+HL
Sbjct: 139 HLELFNCLLKPPPAFKGFRNLKSLDLQHVTLAQEVFENLISSCALLERLTLMNFDGFTHL 198

Query: 181 NIHAPNLLFFDIGGVFEDVNFDSTSNLAIVSIGLYVNTEYDETLPLVSTGNMIKFFAPLP 360
            I+APNL FFDIGG+F+DV+F +TS L +VSIGLY N + D  +   S+  +++FF  LP
Sbjct: 199 KINAPNLQFFDIGGIFDDVSFHNTSLLTLVSIGLYANVKNDRHVSRGSSSKLLRFFVNLP 258

Query: 361 RIRRLEVQSLFLKYLAAGNVPKRLPTPSIELNYVSLRINFKDRAESLAALCILRSSPNLQ 540
            +RRLE+QS F+KYLA   VP RLP P ++LNY+S+RINF D  E+ AALCIL+S PNLQ
Sbjct: 259 HLRRLEIQSYFIKYLAISKVPSRLPKPCMDLNYISIRINFNDFEENSAALCILKSCPNLQ 318

Query: 541 ELEILTRLEEHAAVRTDARSWEEYYNNCSFSQLQLVKIAGISNVKWELNFINFLLANSPR 720
           E+E+L R EE A V      W +    C F QL+LVKI GIS ++ EL+ I FLL+NSP 
Sbjct: 319 EIEMLGRPEEQADVEPQTGFWGDDQWKCLFGQLRLVKIVGISGIRSELDCIKFLLSNSPV 378

Query: 721 LEKMTVKPASTDGAWELMKELLRFRRASVLAEIIYLDP 834
           LE+MTVKPAS +G WEL+KELLRFRRAS+ AE+IYL+P
Sbjct: 379 LEQMTVKPASIEGGWELVKELLRFRRASIQAEVIYLEP 416


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