BLASTX nr result

ID: Panax21_contig00018664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018664
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   158   1e-36
emb|CBI34828.3| unnamed protein product [Vitis vinifera]              157   2e-36
emb|CAD18921.1| RNA-binding protein precursor [Persea americana]      151   1e-34
ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|1...   140   2e-31
ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycin...   133   4e-29

>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score =  158 bits (399), Expect = 1e-36
 Identities = 97/190 (51%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
 Frame = +1

Query: 124 SIPKCCIPTPFRASSPFLSLPSEPITLIH----SSSSWVSHKPKISRSILVPFVAQTSDW 291
           S+P     T  +   P LSLP +P+ L H     SSSWVS K K S + LVPFVAQTSDW
Sbjct: 20  SVPTTLFTT--KTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQTSDW 77

Query: 292 AQQXXXXXXXXXXXVDTIQLGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 471
           AQQ                   EAS                                   
Sbjct: 78  AQQEEEEEKGGLTWDSEGGEEIEASGSEEAWEGEVGEDGEESEGSEDTYSEPPEE----- 132

Query: 472 AKLFVGNLPYDYDSAKLAELFNQAGVVEIAEVIYNRQTDQSRGFGFVTMSTVEEAEKAVE 651
           AKLFVGNLPYD DS KLA+LF++AGVVEIAEVIYNR+TDQSRGFGF+TMSTVEEAEKAVE
Sbjct: 133 AKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVE 192

Query: 652 LFNRYDASGR 681
           +FNRYD +GR
Sbjct: 193 MFNRYDLNGR 202



 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = +1

Query: 475 KLFVGNLPYDYDSAKLAELFNQAGVVEIAEVIYNRQTDQSRGFGFVTMSTVEEAEKAVEL 654
           +++VGNLP+  D A+L ++F++ G V  A V+Y+R T +SRGFGFVTMS+  E   A+  
Sbjct: 228 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 287

Query: 655 FNRYDASGRPL 687
            +     GR +
Sbjct: 288 LDGQSLDGRAI 298


>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  157 bits (397), Expect = 2e-36
 Identities = 95/190 (50%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
 Frame = +1

Query: 124 SIPKCCIPTPFRASSPFLSLPSEPITLIH----SSSSWVSHKPKISRSILVPFVAQTSDW 291
           S+P     T  +   P LSLP +P+ L H     SSSWVS K K S + LVPFVAQTSDW
Sbjct: 8   SVPTTLFTT--KTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQTSDW 65

Query: 292 AQQXXXXXXXXXXXVDTIQLGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 471
           AQQ             +    +E                                     
Sbjct: 66  AQQEEEEEKDGEESEGSEDTYSEPPEE--------------------------------- 92

Query: 472 AKLFVGNLPYDYDSAKLAELFNQAGVVEIAEVIYNRQTDQSRGFGFVTMSTVEEAEKAVE 651
           AKLFVGNLPYD DS KLA+LF++AGVVEIAEVIYNR+TDQSRGFGF+TMSTVEEAEKAVE
Sbjct: 93  AKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVE 152

Query: 652 LFNRYDASGR 681
           +FNRYD +GR
Sbjct: 153 MFNRYDLNGR 162



 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = +1

Query: 475 KLFVGNLPYDYDSAKLAELFNQAGVVEIAEVIYNRQTDQSRGFGFVTMSTVEEAEKAVEL 654
           +++VGNLP+  D A+L ++F++ G V  A V+Y+R T +SRGFGFVTMS+  E   A+  
Sbjct: 188 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 247

Query: 655 FNRYDASGRPL 687
            +     GR +
Sbjct: 248 LDGQSLDGRAI 258


>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
          Length = 300

 Score =  151 bits (382), Expect = 1e-34
 Identities = 96/192 (50%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
 Frame = +1

Query: 127 IPKCCIPTPFRASSPFLSLPSEPITLIH---SSSSWVSHK--PKISRSILVPFVAQTSDW 291
           +P   I    +   PFL +PS+PI LIH   SSSSWVS K  P  S   L   VAQTSDW
Sbjct: 2   VPSSPILFSSKPPCPFLPIPSKPIKLIHLSTSSSSWVSFKKSPSPSSRSLTTLVAQTSDW 61

Query: 292 AQQXXXXXXXXXXXVDTIQLGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 471
           AQQ            D    G E                                     
Sbjct: 62  AQQEEDSNVAEATLSDWEGEG-EGEGEEQTESGAEDGEESGGDGFVEGGEEDSYPLPPEE 120

Query: 472 AKLFVGNLPYDYDSAKLAELFNQAGVVEIAEVIYNRQTDQSRGFGFVTMSTVEEAEKAVE 651
           AKLFVGNLPYD D   LAELF+QAG VE+AEVIYNR+TDQSRGFGFVTMSTVEEAEKAVE
Sbjct: 121 AKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVE 180

Query: 652 LFNRYDASGRPL 687
           +FNRYD +GR L
Sbjct: 181 MFNRYDINGRLL 192



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 31/71 (43%), Positives = 48/71 (67%)
 Frame = +1

Query: 475 KLFVGNLPYDYDSAKLAELFNQAGVVEIAEVIYNRQTDQSRGFGFVTMSTVEEAEKAVEL 654
           +++VGNLP+  D A+L ++F++ G V  A V+Y+R+T +SRGFGFVTMST  E + A+  
Sbjct: 216 RMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAA 275

Query: 655 FNRYDASGRPL 687
            +     GR +
Sbjct: 276 LDGQSLDGRAI 286


>ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|118486956|gb|ABK95311.1|
           unknown [Populus trichocarpa]
           gi|222845826|gb|EEE83373.1| predicted protein [Populus
           trichocarpa]
          Length = 276

 Score =  140 bits (354), Expect = 2e-31
 Identities = 84/175 (48%), Positives = 104/175 (59%), Gaps = 3/175 (1%)
 Frame = +1

Query: 166 SPFLSLPSEPITLIHSSS--SWVSHKPK-ISRSILVPFVAQTSDWAQQXXXXXXXXXXXV 336
           SPF+S+ S+PI ++ S+S  SWVS K    S    +P VAQTSDWAQQ            
Sbjct: 23  SPFISITSKPIKVVFSTSFPSWVSLKTSNFSTFNTIPLVAQTSDWAQQDEE--------- 73

Query: 337 DTIQLGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLFVGNLPYDYDSA 516
           DT+ LG E+                                    AKL+VGNLPYD +S 
Sbjct: 74  DTVTLGEES---------------------FGDGSEETFPEPPEEAKLYVGNLPYDVNSE 112

Query: 517 KLAELFNQAGVVEIAEVIYNRQTDQSRGFGFVTMSTVEEAEKAVELFNRYDASGR 681
            LA+LF+QAG VE+AE+IYNR+TDQSRGFGFVTMSTV+EAEKA+E F+RYD +GR
Sbjct: 113 NLAQLFDQAGTVEVAEIIYNRETDQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGR 167



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 29/71 (40%), Positives = 46/71 (64%)
 Frame = +1

Query: 475 KLFVGNLPYDYDSAKLAELFNQAGVVEIAEVIYNRQTDQSRGFGFVTMSTVEEAEKAVEL 654
           +++VGNLP+  D A+L ++F++ G V  A V+ +R+T +SRGFGFVTMS+  E   A+  
Sbjct: 192 RIYVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRGFGFVTMSSETELNDAIAA 251

Query: 655 FNRYDASGRPL 687
            +     GR +
Sbjct: 252 LDGQSLDGRAI 262


>ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
           gi|255644452|gb|ACU22730.1| unknown [Glycine max]
          Length = 290

 Score =  133 bits (334), Expect = 4e-29
 Identities = 94/205 (45%), Positives = 107/205 (52%), Gaps = 3/205 (1%)
 Frame = +1

Query: 82  MSSATTPLIKNLHLSIPKCCIPTPFRASSPFLSLPSEPITLIHS---SSSWVSHKPKISR 252
           MS  +  + ++  LS P     T  + S    + PS+P+TL  S   SS  +S      R
Sbjct: 1   MSITSLTMAESCLLSSPSSLFHTKTKPS--LFTPPSKPLTLQFSCLNSSVSLSLAAPTHR 58

Query: 253 SILVPFVAQTSDWAQQXXXXXXXXXXXVDTIQLGAEASXXXXXXXXXXXXXXXXXXXXXX 432
           S LV FVAQTSDWAQQ           +   + G E+                       
Sbjct: 59  SPLVTFVAQTSDWAQQEEEQS------LAETEAGLES-----------------WEPNGE 95

Query: 433 XXXXXXXXXXXXXAKLFVGNLPYDYDSAKLAELFNQAGVVEIAEVIYNRQTDQSRGFGFV 612
                        AKLFVGNLPYD DS KLA LF QAG VEIAEVIYNR+TDQSRGFGFV
Sbjct: 96  DAGDESFVEPPEEAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFV 155

Query: 613 TMSTVEEAEKAVELFNRYDASGRPL 687
           TMSTVEEAE AVE FNRYD  GR L
Sbjct: 156 TMSTVEEAESAVEKFNRYDIDGRLL 180



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 30/70 (42%), Positives = 46/70 (65%)
 Frame = +1

Query: 478 LFVGNLPYDYDSAKLAELFNQAGVVEIAEVIYNRQTDQSRGFGFVTMSTVEEAEKAVELF 657
           ++VGNLP+D D+ +L ++F++ G V  A V+Y+R++ +SRGFGFVTMS   E   AV   
Sbjct: 207 IYVGNLPWDVDNTRLKQIFSKHGNVVNARVVYDRESGRSRGFGFVTMSDETEMNDAVAAL 266

Query: 658 NRYDASGRPL 687
           +     GR +
Sbjct: 267 DGESLDGRAI 276


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