BLASTX nr result

ID: Panax21_contig00018550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018550
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328407.1| predicted protein [Populus trichocarpa] gi|2...   331   5e-89
ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus...   324   5e-87
ref|XP_002319576.1| predicted protein [Populus trichocarpa] gi|2...   324   5e-87
gb|ACN86360.1| GID1-5 [Gossypium hirsutum]                            322   3e-86
gb|ACN86361.1| GID1-6 [Gossypium hirsutum]                            321   4e-86

>ref|XP_002328407.1| predicted protein [Populus trichocarpa] gi|222838122|gb|EEE76487.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  331 bits (848), Expect = 5e-89
 Identities = 158/178 (88%), Positives = 169/178 (94%)
 Frame = +3

Query: 6   VVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVQANANPVDGVFSFDVIIDRGT 185
           VVPLNTW+LISNFKLAYNLLRRPDGTFNRHLAEFLDRKV ANANPVDGVFSFDVIIDRGT
Sbjct: 15  VVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVIIDRGT 74

Query: 186 SLLIRVYRPANADEGMPSIADLEKPLNSDVVPVIIFFHGGSFAHSSANSAIYDTLCRRLV 365
           SLL R+YR A+A E  P+I DLEKP+NS+VVPVIIFFHGGSFAHSS+NSAIYDTLCRRLV
Sbjct: 75  SLLSRIYRRADAQESQPNIVDLEKPVNSEVVPVIIFFHGGSFAHSSSNSAIYDTLCRRLV 134

Query: 366 GLCKAVVISVNYRRAPEYPYPCAYEDGWTALKWVSSRTWLQSQKDSKVHIYLAGDSSG 539
           GLCKAVV+SVNYRRAPE  YPCAY+DGWTALKWV+SRTWLQS+KDSKVHIYLAGDSSG
Sbjct: 135 GLCKAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRTWLQSKKDSKVHIYLAGDSSG 192


>ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus communis]
           gi|223548271|gb|EEF49762.1| Gibberellin receptor GID1,
           putative [Ricinus communis]
          Length = 344

 Score =  324 bits (831), Expect = 5e-87
 Identities = 151/179 (84%), Positives = 169/179 (94%)
 Frame = +3

Query: 3   MVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVQANANPVDGVFSFDVIIDRG 182
           MVVPLNTW+LISNFKLAYNLLRRPDGTFNRHLAEFLDRKV  NANPVDGVFSFDV+IDRG
Sbjct: 14  MVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPPNANPVDGVFSFDVVIDRG 73

Query: 183 TSLLIRVYRPANADEGMPSIADLEKPLNSDVVPVIIFFHGGSFAHSSANSAIYDTLCRRL 362
           TSLL R+YRPA  ++  P+IA+LEKP+ SDVVPVI+FFHGGSFAHSSANSAIYDTLCRRL
Sbjct: 74  TSLLSRIYRPAEGEQLQPNIAELEKPVTSDVVPVILFFHGGSFAHSSANSAIYDTLCRRL 133

Query: 363 VGLCKAVVISVNYRRAPEYPYPCAYEDGWTALKWVSSRTWLQSQKDSKVHIYLAGDSSG 539
           VG+C+AVV+SVNYRRAPE  YPCAY+DGWTALKWV+SRTWL+S+KD+KVH+YLAGDSSG
Sbjct: 134 VGICRAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRTWLESKKDAKVHMYLAGDSSG 192


>ref|XP_002319576.1| predicted protein [Populus trichocarpa] gi|222857952|gb|EEE95499.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  324 bits (831), Expect = 5e-87
 Identities = 157/179 (87%), Positives = 165/179 (92%)
 Frame = +3

Query: 3   MVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVQANANPVDGVFSFDVIIDRG 182
           MVVPLNTW+LISNFKLAYNLLRRPDGTFNRHLAEFLDRKV ANAN VDGVFSFDVIIDRG
Sbjct: 14  MVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANAVDGVFSFDVIIDRG 73

Query: 183 TSLLIRVYRPANADEGMPSIADLEKPLNSDVVPVIIFFHGGSFAHSSANSAIYDTLCRRL 362
           TSLL R+YR A+A    P+I DLEKP N DVVPVIIFFHGGSFAHSSANSAIYDTLCRRL
Sbjct: 74  TSLLSRIYRQADAQVSQPNIVDLEKPNNLDVVPVIIFFHGGSFAHSSANSAIYDTLCRRL 133

Query: 363 VGLCKAVVISVNYRRAPEYPYPCAYEDGWTALKWVSSRTWLQSQKDSKVHIYLAGDSSG 539
           VGLCKAVV+SVNYRRAPE  YPCAY+DGWTALKWV+SR WLQS+KDSKVHIYLAGDSSG
Sbjct: 134 VGLCKAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRAWLQSKKDSKVHIYLAGDSSG 192


>gb|ACN86360.1| GID1-5 [Gossypium hirsutum]
          Length = 344

 Score =  322 bits (824), Expect = 3e-86
 Identities = 155/179 (86%), Positives = 166/179 (92%)
 Frame = +3

Query: 3   MVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVQANANPVDGVFSFDVIIDRG 182
           MVVPLNTW+LISNFKLAYNLLRRPDGTFNRHLAEFLDRKV ANANPVDGVFSFDV+IDRG
Sbjct: 14  MVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVLIDRG 73

Query: 183 TSLLIRVYRPANADEGMPSIADLEKPLNSDVVPVIIFFHGGSFAHSSANSAIYDTLCRRL 362
           TSLL R+YRP  A+E   +IA+LEKP+ + VVPVIIFFHGGSFAHSSANSAIYDTLCRRL
Sbjct: 74  TSLLSRIYRPTTAEEPRLNIAELEKPVMAAVVPVIIFFHGGSFAHSSANSAIYDTLCRRL 133

Query: 363 VGLCKAVVISVNYRRAPEYPYPCAYEDGWTALKWVSSRTWLQSQKDSKVHIYLAGDSSG 539
           V LCKAVV+SVNYRRAPE  YPCAY+DGWTALKWV+SR WLQSQKDSKVHIYLAGDSSG
Sbjct: 134 VSLCKAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRPWLQSQKDSKVHIYLAGDSSG 192


>gb|ACN86361.1| GID1-6 [Gossypium hirsutum]
          Length = 344

 Score =  321 bits (823), Expect = 4e-86
 Identities = 153/179 (85%), Positives = 166/179 (92%)
 Frame = +3

Query: 3   MVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVQANANPVDGVFSFDVIIDRG 182
           M V L+TW+LISNFKLAYNLLRRPDGTFNRHLAEFLDRKV ANANPVDGVFSFDV+IDRG
Sbjct: 14  MAVSLSTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVLIDRG 73

Query: 183 TSLLIRVYRPANADEGMPSIADLEKPLNSDVVPVIIFFHGGSFAHSSANSAIYDTLCRRL 362
           TSLL R+YRPA A+E  P+IA+LEKP+ ++VVPVIIFFHGGSFAHSSANSA YDTLCRRL
Sbjct: 74  TSLLSRIYRPATAEEPQPNIAELEKPVTAEVVPVIIFFHGGSFAHSSANSATYDTLCRRL 133

Query: 363 VGLCKAVVISVNYRRAPEYPYPCAYEDGWTALKWVSSRTWLQSQKDSKVHIYLAGDSSG 539
           V LCKAVV+SVNYRRAPE  YPCAY+DGWTALKWV+SR WLQSQKDSKVHIYLAGDSSG
Sbjct: 134 VSLCKAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRPWLQSQKDSKVHIYLAGDSSG 192


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