BLASTX nr result

ID: Panax21_contig00017466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017466
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...   132   2e-29
emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]   132   2e-29
gb|AAL13083.1| putative translation-initiation factor 3 subunit ...   126   2e-27
ref|XP_002531589.1| Eukaryotic translation initiation factor 3 s...   124   6e-27
emb|CBI29961.3| unnamed protein product [Vitis vinifera]              120   1e-25

>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Vitis vinifera]
          Length = 946

 Score =  132 bits (333), Expect = 2e-29
 Identities = 80/151 (52%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
 Frame = +1

Query: 1   MSSSNAKALNSMKQKLKKNNKQYEELINKCRENPESXXXXXXXXXXXXXXXXXXXXXXXP 180
           MSSSNAKALNSMKQKLKKNNKQYE+LINK RE+PES                       P
Sbjct: 141 MSSSNAKALNSMKQKLKKNNKQYEDLINKYREHPESEEEGDEDEEMEEDEDSGSEFEEDP 200

Query: 181 TKIAM-GXXXXXXXXXXXXXXXXXXSGSGWEXXXXXXXXXXXXXXXX-PSQTTWDTVNKK 354
           +KIAM                    +G GWE                 PS+ TWDTVNKK
Sbjct: 201 SKIAMRSDSEEDEEDGEDREDSAAEAGGGWEKKMSKKDKLMDKQFMKDPSEITWDTVNKK 260

Query: 355 FKEIVAARGRKGTGRIELVEQLTFLTKVAKT 447
           FKEIVA RGRKGTGRIE VEQLTFLT+VAKT
Sbjct: 261 FKEIVAVRGRKGTGRIEQVEQLTFLTRVAKT 291


>emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]
          Length = 1047

 Score =  132 bits (333), Expect = 2e-29
 Identities = 80/151 (52%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
 Frame = +1

Query: 1   MSSSNAKALNSMKQKLKKNNKQYEELINKCRENPESXXXXXXXXXXXXXXXXXXXXXXXP 180
           MSSSNAKALNSMKQKLKKNNKQYE+LINK RE+PES                       P
Sbjct: 141 MSSSNAKALNSMKQKLKKNNKQYEDLINKYREHPESEEEGDEDEEMEEDEDSGSEFEEDP 200

Query: 181 TKIAM-GXXXXXXXXXXXXXXXXXXSGSGWEXXXXXXXXXXXXXXXX-PSQTTWDTVNKK 354
           +KIAM                    +G GWE                 PS+ TWDTVNKK
Sbjct: 201 SKIAMRSDSEEDEEDGEDREDSAAEAGGGWEKKMSKKDKLMDKQFMKDPSEITWDTVNKK 260

Query: 355 FKEIVAARGRKGTGRIELVEQLTFLTKVAKT 447
           FKEIVA RGRKGTGRIE VEQLTFLT+VAKT
Sbjct: 261 FKEIVAVRGRKGTGRIEQVEQLTFLTRVAKT 291


>gb|AAL13083.1| putative translation-initiation factor 3 subunit [Prunus avium]
          Length = 934

 Score =  126 bits (316), Expect = 2e-27
 Identities = 79/150 (52%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
 Frame = +1

Query: 1   MSSSNAKALNSMKQKLKKNNKQYEELINKCRENPESXXXXXXXXXXXXXXXXXXXXXXXP 180
           MSSSNAKALNSMKQKLKKNNKQYEELINK RENPE                        P
Sbjct: 139 MSSSNAKALNSMKQKLKKNNKQYEELINKYRENPEQSDEEKEAEEDSEDDGSVSEIED-P 197

Query: 181 TKIAMGXXXXXXXXXXXXXXXXXXSGSGWEXXXXXXXXXXXXXXXX-PSQTTWDTVNKKF 357
           T I M                   +  GWE                 PS+ TWDTVNKKF
Sbjct: 198 TDIVMSNSDDDGDEEEDEKDDQ--TDEGWEKKMSKKDKLMDRQFMKDPSEITWDTVNKKF 255

Query: 358 KEIVAARGRKGTGRIELVEQLTFLTKVAKT 447
           KE+VAARGRKGTGR E VEQLTFLTKVAKT
Sbjct: 256 KEVVAARGRKGTGRFEQVEQLTFLTKVAKT 285


>ref|XP_002531589.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223528785|gb|EEF30792.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 619

 Score =  124 bits (312), Expect = 6e-27
 Identities = 75/149 (50%), Positives = 81/149 (54%)
 Frame = +1

Query: 1   MSSSNAKALNSMKQKLKKNNKQYEELINKCRENPESXXXXXXXXXXXXXXXXXXXXXXXP 180
           MS+SNAKALNSMKQKLKKNNKQYE+LINK RENPES                       P
Sbjct: 139 MSTSNAKALNSMKQKLKKNNKQYEDLINKYRENPESEEEQEGDDESEEEEDSDLEFVEDP 198

Query: 181 TKIAMGXXXXXXXXXXXXXXXXXXSGSGWEXXXXXXXXXXXXXXXXPSQTTWDTVNKKFK 360
           +KI                      G   +                PS+ TWDTVNKKFK
Sbjct: 199 SKIPSDEDEEEDEDRQDNQTEL--EGDWQKMMSKKDKLMDRQFMKDPSEITWDTVNKKFK 256

Query: 361 EIVAARGRKGTGRIELVEQLTFLTKVAKT 447
           E+VAARGRKGTGR E VEQLTFLTKVAKT
Sbjct: 257 EVVAARGRKGTGRFEQVEQLTFLTKVAKT 285


>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  120 bits (301), Expect = 1e-25
 Identities = 75/150 (50%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
 Frame = +1

Query: 1   MSSSNAKALNSMKQKLKKNNKQYEELINKCRENPESXXXXXXXXXXXXXXXXXXXXXXXP 180
           MSSSNAKALNSMKQKLKKNNKQYE+LINK RE+PES                        
Sbjct: 141 MSSSNAKALNSMKQKLKKNNKQYEDLINKYREHPESEEEEDEEDGEDREDSAAE------ 194

Query: 181 TKIAMGXXXXXXXXXXXXXXXXXXSGSGWEXXXXXXXXXXXXXXXX-PSQTTWDTVNKKF 357
                                   +G GWE                 PS+ TWDTVNKKF
Sbjct: 195 ------------------------AGGGWEKKMSKKDKLMDKQFMKDPSEITWDTVNKKF 230

Query: 358 KEIVAARGRKGTGRIELVEQLTFLTKVAKT 447
           KEIVA RGRKGTGRIE VEQLTFLT+VAKT
Sbjct: 231 KEIVAVRGRKGTGRIEQVEQLTFLTRVAKT 260


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