BLASTX nr result

ID: Panax21_contig00017317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017317
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19333.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g...    96   2e-18
ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus ...    93   3e-17
ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g...    92   3e-17
ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g...    91   1e-16

>emb|CBI19333.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +2

Query: 2   GGCLKQILEISDAKITITDPKPGAAETAIIISGTPEQTHAAQSLIQAFVISESVAP 169
           GGCL+QI +ISDAKITIT+PKPGA+ET IIISGTPEQTHAAQSLIQAFV+SE+ +P
Sbjct: 617 GGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETESP 672


>ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 701

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +2

Query: 2   GGCLKQILEISDAKITITDPKPGAAETAIIISGTPEQTHAAQSLIQAFVISESVAP 169
           GGCL+QI +ISDAKITIT+PKPGA+ET IIISGTPEQTHAAQSLIQAFV+SE+ +P
Sbjct: 646 GGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETESP 701


>ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 679

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = +2

Query: 2   GGCLKQILEISDAKITITDPKPGAAETAIIISGTPEQTHAAQSLIQAFVISE 157
           G CLKQI +ISDAKIT+T+PKPGAAET IIISGTPEQTHAAQSLIQAFV+SE
Sbjct: 624 GACLKQIRQISDAKITVTEPKPGAAETVIIISGTPEQTHAAQSLIQAFVMSE 675


>ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 678

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/52 (88%), Positives = 48/52 (92%)
 Frame = +2

Query: 2   GGCLKQILEISDAKITITDPKPGAAETAIIISGTPEQTHAAQSLIQAFVISE 157
           G CLKQIL+ISDA ITITDPKPGA ET IIISGTPEQTHAAQSLIQAFV+SE
Sbjct: 623 GECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSE 674


>ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 676

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/52 (86%), Positives = 47/52 (90%)
 Frame = +2

Query: 2   GGCLKQILEISDAKITITDPKPGAAETAIIISGTPEQTHAAQSLIQAFVISE 157
           G CLKQIL+ISDA ITITDPKPG  ET IIISGTPEQTHAAQSLIQAFV+SE
Sbjct: 621 GECLKQILQISDANITITDPKPGTVETKIIISGTPEQTHAAQSLIQAFVMSE 672


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