BLASTX nr result

ID: Panax21_contig00017312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017312
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274892.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3 [...   273   1e-71
ref|NP_566800.1| protein auxin SIGNALING F-BOX 2 [Arabidopsis th...   257   8e-67
gb|AFB74453.1| transport inhibitor response protein [Prunus pers...   257   8e-67
ref|XP_002892715.1| auxin signaling F-box 3 [Arabidopsis lyrata ...   256   1e-66
ref|XP_002875343.1| auxin signaling F-box 2 [Arabidopsis lyrata ...   255   2e-66

>ref|XP_002274892.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3 [Vitis vinifera]
          Length = 572

 Score =  273 bits (698), Expect = 1e-71
 Identities = 128/149 (85%), Positives = 142/149 (95%)
 Frame = -2

Query: 449 FLTSHRDRNAVSLVCKSWHRVERYSRERVFIGNCYAISPERLIGRFPRIRSLTLKGKPHF 270
           FLTSHRDRN VSLVCKSW +VE++SR RVF+GNCYAISPERLI RFPR+R+LTLKGKPHF
Sbjct: 15  FLTSHRDRNTVSLVCKSWFKVEKWSRRRVFVGNCYAISPERLIARFPRVRALTLKGKPHF 74

Query: 269 ADFNLVPPDWGGFVFPWIEAMAKSGVNLEELKLKRMVVSDDSLELLARSFVNFKSLVLVS 90
           ADFNLVPPDWGGFV+PWIEAMAKS + LEEL+LKRMVVS++ LELLARSFVNFKSLVLVS
Sbjct: 75  ADFNLVPPDWGGFVYPWIEAMAKSNIGLEELRLKRMVVSNEGLELLARSFVNFKSLVLVS 134

Query: 89  CEGFSTDGLAAIASNCRFLRELDLQENEV 3
           CEGF+TDGLAA+A+NCRFLRELDLQENEV
Sbjct: 135 CEGFTTDGLAAVAANCRFLRELDLQENEV 163


>ref|NP_566800.1| protein auxin SIGNALING F-BOX 2 [Arabidopsis thaliana]
           gi|75274428|sp|Q9LW29.1|AFB2_ARATH RecName: Full=Protein
           AUXIN SIGNALING F-BOX 2 gi|9279671|dbj|BAB01228.1|
           transport inhibitor response-like protein [Arabidopsis
           thaliana] gi|17064984|gb|AAL32646.1| transport inhibitor
           response-like protein [Arabidopsis thaliana]
           gi|34098913|gb|AAQ56839.1| At3g26830 [Arabidopsis
           thaliana] gi|332643697|gb|AEE77218.1| protein auxin
           SIGNALING F-BOX 2 [Arabidopsis thaliana]
          Length = 575

 Score =  257 bits (656), Expect = 8e-67
 Identities = 118/149 (79%), Positives = 142/149 (95%)
 Frame = -2

Query: 449 FLTSHRDRNAVSLVCKSWHRVERYSRERVFIGNCYAISPERLIGRFPRIRSLTLKGKPHF 270
           F+TSH+DRNA+SLVCKSW+++ERYSR++VFIGNCYAI+PERL+ RFP ++SLTLKGKPHF
Sbjct: 15  FVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRFPCLKSLTLKGKPHF 74

Query: 269 ADFNLVPPDWGGFVFPWIEAMAKSGVNLEELKLKRMVVSDDSLELLARSFVNFKSLVLVS 90
           ADFNLVP +WGGFV PWIEA+A+S V LEEL+LKRMVV+D+SLELL+RSFVNFKSLVLVS
Sbjct: 75  ADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELLSRSFVNFKSLVLVS 134

Query: 89  CEGFSTDGLAAIASNCRFLRELDLQENEV 3
           CEGF+TDGLA+IA+NCR LR+LDLQENE+
Sbjct: 135 CEGFTTDGLASIAANCRHLRDLDLQENEI 163


>gb|AFB74453.1| transport inhibitor response protein [Prunus persica]
          Length = 572

 Score =  257 bits (656), Expect = 8e-67
 Identities = 120/148 (81%), Positives = 140/148 (94%)
 Frame = -2

Query: 446 LTSHRDRNAVSLVCKSWHRVERYSRERVFIGNCYAISPERLIGRFPRIRSLTLKGKPHFA 267
           +TSH+DRNAVSLVCKSW+R+ER+SRERVFIGNCYAISPER+I RFP ++SLTLKGKPHFA
Sbjct: 16  VTSHKDRNAVSLVCKSWYRIERFSRERVFIGNCYAISPERVIERFPGLKSLTLKGKPHFA 75

Query: 266 DFNLVPPDWGGFVFPWIEAMAKSGVNLEELKLKRMVVSDDSLELLARSFVNFKSLVLVSC 87
           DFNLVP DWGGF+ PW+EA+  S V LEEL+LKRMVVSD+SLELL+RSF+NFKSLVLVSC
Sbjct: 76  DFNLVPHDWGGFLQPWVEALVDSRVGLEELRLKRMVVSDESLELLSRSFLNFKSLVLVSC 135

Query: 86  EGFSTDGLAAIASNCRFLRELDLQENEV 3
           EGF+TDGLAAIA+NCRFL+ELDLQEN++
Sbjct: 136 EGFTTDGLAAIAANCRFLKELDLQENDI 163


>ref|XP_002892715.1| auxin signaling F-box 3 [Arabidopsis lyrata subsp. lyrata]
           gi|297338557|gb|EFH68974.1| auxin signaling F-box 3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 577

 Score =  256 bits (654), Expect = 1e-66
 Identities = 118/149 (79%), Positives = 140/149 (93%)
 Frame = -2

Query: 449 FLTSHRDRNAVSLVCKSWHRVERYSRERVFIGNCYAISPERLIGRFPRIRSLTLKGKPHF 270
           F+ SH+DRN++SLVCKSWH++ER+SR+ VFIGNCYAI+PERLIGRFP ++SLTLKGKPHF
Sbjct: 15  FVASHKDRNSISLVCKSWHKIERFSRKNVFIGNCYAINPERLIGRFPCLKSLTLKGKPHF 74

Query: 269 ADFNLVPPDWGGFVFPWIEAMAKSGVNLEELKLKRMVVSDDSLELLARSFVNFKSLVLVS 90
           ADFNLVP +WGGFV PWIEA+A+S V LEEL+LKRMVV+D+SLELL+RSF NFKSLVLVS
Sbjct: 75  ADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELLSRSFANFKSLVLVS 134

Query: 89  CEGFSTDGLAAIASNCRFLRELDLQENEV 3
           CEGF+TDGLA+IA+NCR LRELDLQENE+
Sbjct: 135 CEGFTTDGLASIAANCRQLRELDLQENEI 163


>ref|XP_002875343.1| auxin signaling F-box 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297321181|gb|EFH51602.1| auxin signaling F-box 2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 575

 Score =  255 bits (652), Expect = 2e-66
 Identities = 117/149 (78%), Positives = 142/149 (95%)
 Frame = -2

Query: 449 FLTSHRDRNAVSLVCKSWHRVERYSRERVFIGNCYAISPERLIGRFPRIRSLTLKGKPHF 270
           F+TSH+DRNA+SLVCKSW+++ER+SR++VFIGNCYAI+PERL+ RFP ++SLTLKGKPHF
Sbjct: 15  FVTSHKDRNAISLVCKSWYKIERFSRQKVFIGNCYAINPERLLRRFPCLKSLTLKGKPHF 74

Query: 269 ADFNLVPPDWGGFVFPWIEAMAKSGVNLEELKLKRMVVSDDSLELLARSFVNFKSLVLVS 90
           ADFNLVP +WGGFV PWIEA+A+S V LEEL+LKRMVV+D+SLELL+RSFVNFKSLVLVS
Sbjct: 75  ADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELLSRSFVNFKSLVLVS 134

Query: 89  CEGFSTDGLAAIASNCRFLRELDLQENEV 3
           CEGF+TDGLA+IA+NCR LR+LDLQENE+
Sbjct: 135 CEGFTTDGLASIAANCRHLRDLDLQENEI 163