BLASTX nr result

ID: Panax21_contig00017302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017302
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514251.1| conserved hypothetical protein [Ricinus comm...   170   3e-40
sp|Q53HY2.1|NINJA_TOBAC RecName: Full=Ninja-family protein mc410...   166   6e-39
emb|CBI28024.3| unnamed protein product [Vitis vinifera]              150   4e-34
ref|XP_002283979.1| PREDICTED: ninja-family protein mc410-like [...   150   4e-34
ref|XP_002325016.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33

>ref|XP_002514251.1| conserved hypothetical protein [Ricinus communis]
           gi|223546707|gb|EEF48205.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 509

 Score =  170 bits (431), Expect = 3e-40
 Identities = 88/125 (70%), Positives = 99/125 (79%), Gaps = 2/125 (1%)
 Frame = -2

Query: 832 DDVKQSGIIVRANTSEQPRA-EGCSSEFQAIRPGIAGDVKFGGCGSVPNLPWVSTSGSGP 656
           DD K+SG+ +R+  +  P A E  S +F AI+PGIA DVKFGGCGS PNLPWVST+GSGP
Sbjct: 386 DDAKRSGMNLRSKDASGPSAAEDSSFDFSAIKPGIASDVKFGGCGSYPNLPWVSTTGSGP 445

Query: 655 KGRTISGVTYRFSATQIRIVCACHGSHMSPEEFVQHASEEQQTNQEIASGLA-FPSTNSA 479
            GRTISGVTYR+SA QIRIVCACHGSHMSPEEFV+HA+EE   N E  S LA FPS N A
Sbjct: 446 NGRTISGVTYRYSANQIRIVCACHGSHMSPEEFVRHANEE-NVNSENGSNLASFPSNNPA 504

Query: 478 ASAQS 464
           ASAQS
Sbjct: 505 ASAQS 509


>sp|Q53HY2.1|NINJA_TOBAC RecName: Full=Ninja-family protein mc410
           gi|62867586|emb|CAI84658.1| hypothetical protein
           [Nicotiana tabacum]
          Length = 510

 Score =  166 bits (420), Expect = 6e-39
 Identities = 85/125 (68%), Positives = 102/125 (81%), Gaps = 2/125 (1%)
 Frame = -2

Query: 832 DDVKQSGIIVRA-NTSEQPRAEGCSSEFQAIRPGIAGDVKFGGCGSVPNLPWVSTSGSGP 656
           ++VK S I  RA +  +QPRAE   SEF  IRPG+A D+KFGG GS PNLPWVST+G GP
Sbjct: 387 ENVKGSNISFRAKDPPDQPRAEAVPSEFSTIRPGLAADLKFGGSGSYPNLPWVSTTGPGP 446

Query: 655 KGRTISGVTYRFSATQIRIVCACHGSHMSPEEFVQHASEEQQTNQEIASGL-AFPSTNSA 479
            GRTISGVTYR+S+TQIRIVCACHGSHMSP++FV+HAS E QT+QE  +G+ +FPS+N A
Sbjct: 447 NGRTISGVTYRYSSTQIRIVCACHGSHMSPDDFVRHASVE-QTSQEPGTGVSSFPSSNPA 505

Query: 478 ASAQS 464
           ASAQS
Sbjct: 506 ASAQS 510


>emb|CBI28024.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  150 bits (378), Expect = 4e-34
 Identities = 83/125 (66%), Positives = 94/125 (75%), Gaps = 2/125 (1%)
 Frame = -2

Query: 832 DDVKQSGIIVRANT-SEQPRAEGCSSEFQAIRPGIAGDVKFGGCGSVPNLPWVSTSGSGP 656
           DDVK + +I R+   ++Q   E  S E  AIRPGIA D+KFGG GS PNLPWVST+GS  
Sbjct: 87  DDVKGNNVIFRSKDGTDQAITEVFSYESSAIRPGIAADMKFGGSGSHPNLPWVSTTGSN- 145

Query: 655 KGRTISGVTYRFSATQIRIVCACHGSHMSPEEFVQHASEEQQTNQEIASGLA-FPSTNSA 479
            G+TISGVTYR+S  QIRIVCACHGSHMSPEEFVQHASEE   N E  +GLA FPS+N A
Sbjct: 146 -GKTISGVTYRYSRDQIRIVCACHGSHMSPEEFVQHASEE-HANPETGTGLAPFPSSNPA 203

Query: 478 ASAQS 464
            SAQS
Sbjct: 204 TSAQS 208


>ref|XP_002283979.1| PREDICTED: ninja-family protein mc410-like [Vitis vinifera]
          Length = 510

 Score =  150 bits (378), Expect = 4e-34
 Identities = 83/125 (66%), Positives = 94/125 (75%), Gaps = 2/125 (1%)
 Frame = -2

Query: 832 DDVKQSGIIVRANT-SEQPRAEGCSSEFQAIRPGIAGDVKFGGCGSVPNLPWVSTSGSGP 656
           DDVK + +I R+   ++Q   E  S E  AIRPGIA D+KFGG GS PNLPWVST+GS  
Sbjct: 389 DDVKGNNVIFRSKDGTDQAITEVFSYESSAIRPGIAADMKFGGSGSHPNLPWVSTTGSN- 447

Query: 655 KGRTISGVTYRFSATQIRIVCACHGSHMSPEEFVQHASEEQQTNQEIASGLA-FPSTNSA 479
            G+TISGVTYR+S  QIRIVCACHGSHMSPEEFVQHASEE   N E  +GLA FPS+N A
Sbjct: 448 -GKTISGVTYRYSRDQIRIVCACHGSHMSPEEFVQHASEE-HANPETGTGLAPFPSSNPA 505

Query: 478 ASAQS 464
            SAQS
Sbjct: 506 TSAQS 510


>ref|XP_002325016.1| predicted protein [Populus trichocarpa] gi|222866450|gb|EEF03581.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  147 bits (372), Expect = 2e-33
 Identities = 78/126 (61%), Positives = 90/126 (71%), Gaps = 3/126 (2%)
 Frame = -2

Query: 832 DDVKQSGIIVRANTS--EQPRAEGCSSEFQAIRPGIAGDVKFGGCGSVPNLPWVSTSGSG 659
           DD K S +  R   +  E+  AE    +F AI+PGI   VKFGGCGS PNLPWVST+  G
Sbjct: 388 DDAKGSTMNFRPKDAPPERSTAETICFDFSAIKPGIGPAVKFGGCGSYPNLPWVSTTAPG 447

Query: 658 PKGRTISGVTYRFSATQIRIVCACHGSHMSPEEFVQHASEEQQTNQEIASGLA-FPSTNS 482
           P GRTISGVTY++SA QIRIVCACHG HMSPEEFV+HASEE   N +  +GLA FP+ N 
Sbjct: 448 PNGRTISGVTYKYSANQIRIVCACHGYHMSPEEFVRHASEE-NANPDAGNGLATFPNANP 506

Query: 481 AASAQS 464
           AAS QS
Sbjct: 507 AASTQS 512


Top