BLASTX nr result

ID: Panax21_contig00017300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017300
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]             112   2e-23
gb|AAP59878.1| Ac-like transposase THELMA13 [Silene latifolia]        112   3e-23
gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]            112   4e-23
gb|AAD48963.1|AF147263_5 contains similarity to transposases [Ar...   111   7e-23
gb|AAF78383.1|AC069551_16 T10O22.20 [Arabidopsis thaliana]            110   9e-23

>gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]
          Length = 745

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
 Frame = -2

Query: 472 KLRAYCKTCTKSYAIGDGGSSHGTRNLHAHEKSC---PGLVNQNVTQMHLDHEGNMLKRK 302
           K    CK C ++Y +      +GT  ++ H +SC   PG   +             + RK
Sbjct: 160 KTEVTCKYCEQTYHLNL--RRNGTNTMNRHMRSCEKTPGSTPR-------------ISRK 204

Query: 301 ISQLIYRDKMAEAIMMHNYPFLIVEHEGL*IVHNYLNLDVKSYTRNTAKADCIKIYKLEK 122
           +  +++R+ +A A++ HN P+  VE+E +     Y+N  ++ ++RNTA +D  KIY+ EK
Sbjct: 205 VDMMVFREMIAVALVQHNLPYSFVEYERIREAFTYVNPSIEFWSRNTAASDVYKIYEREK 264

Query: 121 VKLKRAFENIRGRICLTSDLWSSGTSEGYICLTAHFIDHD 2
           +KLK     I GRICLT+DLW + T E YICLTAH++D D
Sbjct: 265 IKLKEKLAIIPGRICLTTDLWRALTVESYICLTAHYVDVD 304


>gb|AAP59878.1| Ac-like transposase THELMA13 [Silene latifolia]
          Length = 682

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
 Frame = -2

Query: 466 RAYCKTCTKSYAIGDGG-----SSHGTRNLHAHEKSCPGLVNQNVTQMHLDHEGNMLKRK 302
           RA CK C       DGG     S +GT N   H ++CP      V   HL  +G+ +K K
Sbjct: 78  RAICKYC-------DGGPTLAYSGNGTSNFKRHTETCPKRPLLGVA--HLTSDGSFIK-K 127

Query: 301 ISQLIYRDKMAEAIMMHNYPFLIVEHEGL*IVHNYLNLDVKSYTRNTAKADCIKIYKLEK 122
           +  L+Y++++A A++ H +PF   E++G   +H  LN   K  +RNT +  C+KI+K EK
Sbjct: 128 MDPLVYKERVALAVIRHAFPFSYAEYDGNRWLHEGLNESYKPISRNTLRNYCMKIHKREK 187

Query: 121 VKLKRAFENIRGRICLTSDLWSSGTSEGYICLTAHFIDHD 2
             LK +  N+ G+ICLT+D+W++    GYI LTAH+ID +
Sbjct: 188 QILKESLSNLPGKICLTTDMWTAFVGMGYISLTAHYIDSE 227


>gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]
          Length = 633

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
 Frame = -2

Query: 472 KLRAYCKTCTKSYAIGDGGSSHGTRNLHAHEKSC---PGLVNQNVTQMHLDHEGNMLKRK 302
           K    CK C ++Y +      +GT  ++ H +SC   PG   +             + RK
Sbjct: 70  KTEVTCKYCEQTYHLNL--RRNGTNTMNRHMRSCEKTPGSTPR-------------ISRK 114

Query: 301 ISQLIYRDKMAEAIMMHNYPFLIVEHEGL*IVHNYLNLDVKSYTRNTAKADCIKIYKLEK 122
           +  +++R+ +A A++ HN P+  VE+E +     Y N  ++ ++RNTA +D  KIY+ EK
Sbjct: 115 VDMMVFREMIAVALVQHNLPYSFVEYERIREAFTYANPSIEFWSRNTAASDVYKIYEREK 174

Query: 121 VKLKRAFENIRGRICLTSDLWSSGTSEGYICLTAHFIDHD 2
           +KLK     I GRICLT+DLW + T E YICLTAH++D D
Sbjct: 175 IKLKEKLAIIPGRICLTTDLWRALTVESYICLTAHYVDVD 214


>gb|AAD48963.1|AF147263_5 contains similarity to transposases [Arabidopsis thaliana]
           gi|7267311|emb|CAB81093.1| AT4g05510 [Arabidopsis
           thaliana]
          Length = 604

 Score =  111 bits (277), Expect = 7e-23
 Identities = 63/152 (41%), Positives = 84/152 (55%)
 Frame = -2

Query: 463 AYCKTCTKSYAIGDGGSSHGTRNLHAHEKSCPGLVNQNVTQMHLDHEGNMLKRKISQLIY 284
           AYCK C K Y I     + GT NL  H + C   ++       +DH+           + 
Sbjct: 55  AYCKKCLKPYPILP---TTGTSNLIRHHRKCSMGLDVGRKTTKIDHK-----------VV 100

Query: 283 RDKMAEAIMMHNYPFLIVEHEGL*IVHNYLNLDVKSYTRNTAKADCIKIYKLEKVKLKRA 104
           R+K +  I+ H+ PFL VE+E L    +Y+N D K YTRNTA AD +K ++ EK  LK  
Sbjct: 101 REKFSRVIIRHDLPFLCVEYEELRDFISYMNPDYKCYTRNTAAADVVKTWEKEKQILKSE 160

Query: 103 FENIRGRICLTSDLWSSGTSEGYICLTAHFID 8
            E I  RICLTSD W+S   +GYI LTAH++D
Sbjct: 161 LERIPSRICLTSDCWTSLGGDGYIVLTAHYVD 192


>gb|AAF78383.1|AC069551_16 T10O22.20 [Arabidopsis thaliana]
          Length = 876

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
 Frame = -2

Query: 472 KLRAYCKTCTKSYAIGDGGSSHGTRNLHAHEKSC---PGLVNQNVTQMHLDHEGNMLKRK 302
           K    CK C ++Y +      +GT  ++ H +SC   PG   +             + RK
Sbjct: 244 KTEVTCKYCEQTYHLNL--RRNGTNTMNRHMRSCEKTPGSTPR-------------ISRK 288

Query: 301 ISQLIYRDKMAEAIMMHNYPFLIVEHEGL*IVHNYLNLDVKSYTRNTAKADCIKIYKLEK 122
           +  +++R+ +A A++ HN P+  VE+E +     Y N  ++ ++RNTA +D  KIY+ EK
Sbjct: 289 VDMMVFREMIAVALVQHNLPYSFVEYERIREAFTYANPYIEFWSRNTAASDVYKIYEREK 348

Query: 121 VKLKRAFENIRGRICLTSDLWSSGTSEGYICLTAHFIDHD 2
           +KLK     I GRICLT+DLW + T E YICLTAH++D D
Sbjct: 349 IKLKEKLAIIPGRICLTTDLWRALTVESYICLTAHYVDVD 388


Top