BLASTX nr result

ID: Panax21_contig00017219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017219
         (1320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511464.1| mannose-1-phosphate guanyltransferase, putat...   292   1e-76
ref|XP_002322146.1| predicted protein [Populus trichocarpa] gi|2...   289   1e-75
ref|XP_002888999.1| ADP-glucose pyrophosphorylase family protein...   288   2e-75
gb|ABR14736.1| GDP-mannose pyrophosphorylase, partial [Gossypium...   287   5e-75
gb|AAD55285.1|AC008263_16 Similar to gb|AF135422 GDP-mannose pyr...   286   6e-75

>ref|XP_002511464.1| mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
           gi|223550579|gb|EEF52066.1| mannose-1-phosphate
           guanyltransferase, putative [Ricinus communis]
          Length = 415

 Score =  292 bits (747), Expect = 1e-76
 Identities = 144/182 (79%), Positives = 153/182 (84%)
 Frame = -2

Query: 548 IMVGGTTKGTRFRPLSLNIAKPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEERQFA 369
           IMVGG TKGTRFRPLSLN+AKPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEER+FA
Sbjct: 12  IMVGGPTKGTRFRPLSLNVAKPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEEREFA 71

Query: 368 LYVSSISNELKVPVRYLREDKPHGSAGGLYNFRDQLMEDNPXXXXXXXXXXXXXXXXXXX 189
           LYVSSISNELK+PVRYLREDKPHGSAGGLYNFRD +MED+P                   
Sbjct: 72  LYVSSISNELKIPVRYLREDKPHGSAGGLYNFRDLIMEDSP--------------SHIFL 117

Query: 188 XXXXXCCSFPLPEMLDAHRKYGGIGTILVIKVSPESANQFGELVADPTTNELLHYTEKPE 9
                CCSFPLPEMLDAHR+YGG+GTILVIKVS ESA+QFGEL+ADP T ELLHYTEKPE
Sbjct: 118 LNCDVCCSFPLPEMLDAHRRYGGMGTILVIKVSAESASQFGELIADPVTKELLHYTEKPE 177

Query: 8   TF 3
           TF
Sbjct: 178 TF 179


>ref|XP_002322146.1| predicted protein [Populus trichocarpa] gi|222869142|gb|EEF06273.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  289 bits (740), Expect = 1e-75
 Identities = 145/182 (79%), Positives = 152/182 (83%)
 Frame = -2

Query: 548 IMVGGTTKGTRFRPLSLNIAKPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEERQFA 369
           IMVGG TKGTRFRPLSLNI KPLFPLAGQPMVHHPISACK+IPNLAQIYLVGFYEER+FA
Sbjct: 12  IMVGGPTKGTRFRPLSLNIPKPLFPLAGQPMVHHPISACKKIPNLAQIYLVGFYEEREFA 71

Query: 368 LYVSSISNELKVPVRYLREDKPHGSAGGLYNFRDQLMEDNPXXXXXXXXXXXXXXXXXXX 189
           LYVSSISNELKVPVRYLREDKPHGSAGGLYNFRD +MED+P                   
Sbjct: 72  LYVSSISNELKVPVRYLREDKPHGSAGGLYNFRDLIMEDSP--------------SHIFL 117

Query: 188 XXXXXCCSFPLPEMLDAHRKYGGIGTILVIKVSPESANQFGELVADPTTNELLHYTEKPE 9
                CCSFPLPEML+AHR YGG+GTILVIKVS ESA+QFGELVADP TNELLHYTEKPE
Sbjct: 118 LNCDVCCSFPLPEMLEAHRTYGGMGTILVIKVSAESASQFGELVADPDTNELLHYTEKPE 177

Query: 8   TF 3
           TF
Sbjct: 178 TF 179


>ref|XP_002888999.1| ADP-glucose pyrophosphorylase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334840|gb|EFH65258.1| ADP-glucose
           pyrophosphorylase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 415

 Score =  288 bits (737), Expect = 2e-75
 Identities = 143/182 (78%), Positives = 153/182 (84%)
 Frame = -2

Query: 548 IMVGGTTKGTRFRPLSLNIAKPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEERQFA 369
           IMVGG TKGTRFRPLSLNI KPLFP+AGQPMVHHPISACKRIPNLAQIYLVGFYEER+FA
Sbjct: 13  IMVGGPTKGTRFRPLSLNIPKPLFPIAGQPMVHHPISACKRIPNLAQIYLVGFYEEREFA 72

Query: 368 LYVSSISNELKVPVRYLREDKPHGSAGGLYNFRDQLMEDNPXXXXXXXXXXXXXXXXXXX 189
           LYVS+ISNELKVPVRYLREDKPHGSAGGLY+FR+ +MED+P                   
Sbjct: 73  LYVSAISNELKVPVRYLREDKPHGSAGGLYHFRNLIMEDSP--------------SHIFL 118

Query: 188 XXXXXCCSFPLPEMLDAHRKYGGIGTILVIKVSPESANQFGELVADPTTNELLHYTEKPE 9
                CCSFPLPEML+AHR YGGIGT+LVIKVSPESA+QFGELVADP TNELLHYTEKPE
Sbjct: 119 LNCDVCCSFPLPEMLEAHRGYGGIGTLLVIKVSPESASQFGELVADPATNELLHYTEKPE 178

Query: 8   TF 3
           TF
Sbjct: 179 TF 180


>gb|ABR14736.1| GDP-mannose pyrophosphorylase, partial [Gossypium hirsutum]
          Length = 291

 Score =  287 bits (734), Expect = 5e-75
 Identities = 142/182 (78%), Positives = 152/182 (83%)
 Frame = -2

Query: 548 IMVGGTTKGTRFRPLSLNIAKPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEERQFA 369
           IMVGG TKGTRFRPLSLNI KPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEER+FA
Sbjct: 12  IMVGGPTKGTRFRPLSLNIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEEREFA 71

Query: 368 LYVSSISNELKVPVRYLREDKPHGSAGGLYNFRDQLMEDNPXXXXXXXXXXXXXXXXXXX 189
           +YVSSIS EL+VPVRYLREDKPHGSAGGLYNFRD +MEDNP                   
Sbjct: 72  MYVSSISTELRVPVRYLREDKPHGSAGGLYNFRDLIMEDNP--------------SHIFL 117

Query: 188 XXXXXCCSFPLPEMLDAHRKYGGIGTILVIKVSPESANQFGELVADPTTNELLHYTEKPE 9
                CCSFPLPEML+AH++YGG+GTILVIKVS ESA++FGELVADP TNELLHYTEKPE
Sbjct: 118 LNCDVCCSFPLPEMLEAHKRYGGMGTILVIKVSAESASEFGELVADPITNELLHYTEKPE 177

Query: 8   TF 3
           TF
Sbjct: 178 TF 179


>gb|AAD55285.1|AC008263_16 Similar to gb|AF135422 GDP-mannose pyrophosphorylase A (GMPPA) from
           Homo sapiens. ESTs gb|AA712990, gb|N65247, gb|N38149,
           gb|T04179, gb|Z38092, gb|T76473, gb|N96403, gb|AA394551
           and gb|AA728527 come from this gene [Arabidopsis
           thaliana]
          Length = 411

 Score =  286 bits (733), Expect = 6e-75
 Identities = 142/182 (78%), Positives = 153/182 (84%)
 Frame = -2

Query: 548 IMVGGTTKGTRFRPLSLNIAKPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEERQFA 369
           IMVGG TKGTRFRPLSLNI KPLFP+AGQPMVHHPISACKRIPNLAQIYLVGFYEER+FA
Sbjct: 9   IMVGGPTKGTRFRPLSLNIPKPLFPIAGQPMVHHPISACKRIPNLAQIYLVGFYEEREFA 68

Query: 368 LYVSSISNELKVPVRYLREDKPHGSAGGLYNFRDQLMEDNPXXXXXXXXXXXXXXXXXXX 189
           LYVS+ISNELKVPVRYLREDKPHGSAGGLY+FR+ +MED+P                   
Sbjct: 69  LYVSAISNELKVPVRYLREDKPHGSAGGLYHFRNLIMEDSP--------------SHIFL 114

Query: 188 XXXXXCCSFPLPEMLDAHRKYGGIGTILVIKVSPESANQFGELVADPTTNELLHYTEKPE 9
                CCSFPLP+ML+AHR YGGIGT+LVIKVSPESA+QFGELVADP TNELLHYTEKPE
Sbjct: 115 LNCDVCCSFPLPKMLEAHRGYGGIGTLLVIKVSPESASQFGELVADPVTNELLHYTEKPE 174

Query: 8   TF 3
           TF
Sbjct: 175 TF 176


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