BLASTX nr result

ID: Panax21_contig00017117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017117
         (1396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avel...   478   e-132
ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synt...   476   e-132
gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza k...   470   e-130
emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]   469   e-129
ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, puta...   467   e-129

>gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
          Length = 373

 Score =  478 bits (1229), Expect = e-132
 Identities = 250/373 (67%), Positives = 288/373 (77%), Gaps = 5/373 (1%)
 Frame = +2

Query: 278  MNVSTTSTWIQTNSIYNHNXXXXXXXXXXXXXQNPPS---LLFFPTPIHTQXXXXXXXXI 448
            M+    STW+QT S++N                +P     + F P              +
Sbjct: 1    MSCVNLSTWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISSVSVSAV 60

Query: 449  LTKES--QHLQXXXXXXPTFNFKSYMLQKANSVNDALNAAVILQNPAKIHESMRYSLLAG 622
            LTKE   +  +       TFNFK+YMLQKANSVN AL+AAV L++P KIHE+MRYSLLAG
Sbjct: 61   LTKEDTLREEEESESEARTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAG 120

Query: 623  GKRVRPVLCIAACELVGGHQTTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHK 802
            GKRVRP+LCIAACELVGG ++ AMPAAC+VEMIHTMSL+HDDLPCMDNDDLRRGKPTNHK
Sbjct: 121  GKRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 180

Query: 803  VYGEXXXXXXXXXXXXXXXEHMAIATKGVPSERIVRAIVELAKSIGAEGLVAGQVVDLCS 982
            V+GE               EH+A++T+GVP  RI+RAI ELA+SIGAEGLVAGQVVD+CS
Sbjct: 181  VFGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICS 240

Query: 983  EGISSVGVEHLEFIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDD 1162
            EG+S VG+EHLEFIH+HKTAALLEG+VVLGAILGGGS+EEVEKLR FAR IGLLFQVVDD
Sbjct: 241  EGLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDD 300

Query: 1163 ILDVTKSSQELGKTAGKDLVADKTTYPKLIGIEESREFAEKLNKEARDQLVGFDPEKAIP 1342
            ILDVTKSSQELGKTAGKDLVADK TYPKL+G+E+SREFAEKLNK+A+DQL GFD EKA P
Sbjct: 301  ILDVTKSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAP 360

Query: 1343 LIALANYIAYRDN 1381
            LIALANYIA+R N
Sbjct: 361  LIALANYIAHRQN 373


>ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
            [Vitis vinifera]
          Length = 368

 Score =  476 bits (1225), Expect = e-132
 Identities = 249/372 (66%), Positives = 279/372 (75%), Gaps = 4/372 (1%)
 Frame = +2

Query: 278  MNVSTTSTWIQTNSIYNHNXXXXXXXXXXXXX--QNPPSLLFFPTPIHTQXXXXXXXXIL 451
            MN     TW+ T+ ++NH                +NP     FP              +L
Sbjct: 1    MNTVNLGTWVHTSYVFNHGGRLKSPVLSRMLHPLKNPS----FPMLSQRSGRPMSLVAVL 56

Query: 452  TKESQHL--QXXXXXXPTFNFKSYMLQKANSVNDALNAAVILQNPAKIHESMRYSLLAGG 625
            TKE             P FNF +Y+L KANSVN AL+ AV ++ P K+HESMRYSLLAGG
Sbjct: 57   TKEEMVRGGDTPEEEKPAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGG 116

Query: 626  KRVRPVLCIAACELVGGHQTTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKV 805
            KRVRPVLCIAACELVGG + TAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKV
Sbjct: 117  KRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKV 176

Query: 806  YGEXXXXXXXXXXXXXXXEHMAIATKGVPSERIVRAIVELAKSIGAEGLVAGQVVDLCSE 985
            +GE               EHMA AT GVP   IVRA+ ELAKSIG+EGLVAGQVVD+CSE
Sbjct: 177  FGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSE 236

Query: 986  GISSVGVEHLEFIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDI 1165
            G+  VG+EHLE+IHVHKTAALLEG+VVLGAILGGGS+EE+EKLRKFARCIGLLFQVVDDI
Sbjct: 237  GLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDI 296

Query: 1166 LDVTKSSQELGKTAGKDLVADKTTYPKLIGIEESREFAEKLNKEARDQLVGFDPEKAIPL 1345
            LDVTKSSQELGKTAGKDLVADK TYPKL+GIE+SRE AE+LNK+A+DQL GFDP+KA PL
Sbjct: 297  LDVTKSSQELGKTAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPL 356

Query: 1346 IALANYIAYRDN 1381
            IAL+NYIAYR N
Sbjct: 357  IALSNYIAYRQN 368


>gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza kurrooa]
          Length = 354

 Score =  470 bits (1209), Expect = e-130
 Identities = 234/296 (79%), Positives = 261/296 (88%)
 Frame = +2

Query: 494  PTFNFKSYMLQKANSVNDALNAAVILQNPAKIHESMRYSLLAGGKRVRPVLCIAACELVG 673
            PTF+FKSYML+KANSVN AL+ ++ L  P KIHESMRYSLLAGGKR+RP+LCIAACELVG
Sbjct: 59   PTFDFKSYMLEKANSVNKALDDSIPLTEPLKIHESMRYSLLAGGKRIRPLLCIAACELVG 118

Query: 674  GHQTTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEXXXXXXXXXXXXX 853
            G ++TAMPAACAVEM+HTMSLMHDDLPCMDNDDLRRGKPTNHK++ E             
Sbjct: 119  GEESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKIFSEDVAVLAGDAMLAL 178

Query: 854  XXEHMAIATKGVPSERIVRAIVELAKSIGAEGLVAGQVVDLCSEGISSVGVEHLEFIHVH 1033
              EH+A +TKGVPSERI+R I ELAK IG EGLVAGQVVD+ SEG++ VG+EHLEFIH +
Sbjct: 179  SFEHVATSTKGVPSERIIRVIYELAKCIGCEGLVAGQVVDISSEGMTQVGLEHLEFIHSN 238

Query: 1034 KTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK 1213
            KTAALLEGSVVLGA+LGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 239  KTAALLEGSVVLGALLGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGK 298

Query: 1214 DLVADKTTYPKLIGIEESREFAEKLNKEARDQLVGFDPEKAIPLIALANYIAYRDN 1381
            DLVADKTTYPKLIGIE+SREFAE+LN+EA+DQL+GF   KA PLIALANYIAYRDN
Sbjct: 299  DLVADKTTYPKLIGIEKSREFAERLNREAQDQLLGFHHNKAAPLIALANYIAYRDN 354


>emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
          Length = 308

 Score =  469 bits (1206), Expect = e-129
 Identities = 234/296 (79%), Positives = 258/296 (87%)
 Frame = +2

Query: 494  PTFNFKSYMLQKANSVNDALNAAVILQNPAKIHESMRYSLLAGGKRVRPVLCIAACELVG 673
            P FNF +Y+L KANSVN AL+ AV ++ P K+HESMRYSLLAGGKRVRPVLCIAACELVG
Sbjct: 13   PAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVG 72

Query: 674  GHQTTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEXXXXXXXXXXXXX 853
            G + TAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKV+GE             
Sbjct: 73   GDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAF 132

Query: 854  XXEHMAIATKGVPSERIVRAIVELAKSIGAEGLVAGQVVDLCSEGISSVGVEHLEFIHVH 1033
              EHMA AT GVP   IVRA+ ELAKSIG+EGLVAGQVVD+CSEG+  VG+EHLE+IHVH
Sbjct: 133  AFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVH 192

Query: 1034 KTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK 1213
            KTAALLEG+VVLGAILGGGS+EE+EKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK
Sbjct: 193  KTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK 252

Query: 1214 DLVADKTTYPKLIGIEESREFAEKLNKEARDQLVGFDPEKAIPLIALANYIAYRDN 1381
            DLVADK TYPKL+GIE+SRE AE+LNK+A+DQL GFDP+KA PLIAL+NYIAYR N
Sbjct: 253  DLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYIAYRQN 308


>ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
            gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate
            synthase, putative [Ricinus communis]
          Length = 369

 Score =  467 bits (1202), Expect = e-129
 Identities = 249/373 (66%), Positives = 284/373 (76%), Gaps = 5/373 (1%)
 Frame = +2

Query: 278  MNVSTTSTWIQTNSIYNHNXXXXXXXXXXXXXQNPPSLLFFPTPIH-TQXXXXXXXXILT 454
            M+     +W+ T+SI+N                NP   L  P     ++        I+T
Sbjct: 1    MSSVNLGSWVHTSSIFNQ----ASRSRSKSFSSNPLKGLQIPVLCSKSRKPISFIAAIIT 56

Query: 455  KESQHLQXXXXXX----PTFNFKSYMLQKANSVNDALNAAVILQNPAKIHESMRYSLLAG 622
            KE + LQ          PTF+FKSYMLQKA S+N AL+AAV ++ P KIHESMRYSLLAG
Sbjct: 57   KEEKTLQEEQDNFNSRPPTFDFKSYMLQKAASINQALDAAVPIREPTKIHESMRYSLLAG 116

Query: 623  GKRVRPVLCIAACELVGGHQTTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHK 802
            GKRVRP LC+AACELVGG+++ AMPAACAVEMIHTMSL+HDDLPCMDNDDLRRGKPTNH 
Sbjct: 117  GKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHI 176

Query: 803  VYGEXXXXXXXXXXXXXXXEHMAIATKGVPSERIVRAIVELAKSIGAEGLVAGQVVDLCS 982
            V+GE               EH+AIAT  V   RIVRA+ ELAK+IGAEGLVAGQVVD+CS
Sbjct: 177  VFGEDVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICS 236

Query: 983  EGISSVGVEHLEFIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDD 1162
            EG+S VG+E LEFIHVHKTA LLEG+VVLGAI+GGG+DEEVEKLRK+AR IGLLFQVVDD
Sbjct: 237  EGLSEVGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDD 296

Query: 1163 ILDVTKSSQELGKTAGKDLVADKTTYPKLIGIEESREFAEKLNKEARDQLVGFDPEKAIP 1342
            ILDVTKSSQELGKTAGKDLVADK TYPKL+GI++SREFAEKLNKEA++QL GFDPEKA P
Sbjct: 297  ILDVTKSSQELGKTAGKDLVADKVTYPKLMGIDKSREFAEKLNKEAQEQLAGFDPEKAAP 356

Query: 1343 LIALANYIAYRDN 1381
            LIALANYIAYR N
Sbjct: 357  LIALANYIAYRQN 369