BLASTX nr result

ID: Panax21_contig00016278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016278
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630244.1| hypothetical protein MTR_8g093410 [Medicago ...    60   2e-08
ref|XP_003599949.1| GRF zinc finger containing protein [Medicago...    59   2e-08
ref|XP_003612076.1| GRF zinc finger containing protein [Medicago...    57   1e-07
ref|XP_003593148.1| GRF zinc finger containing protein [Medicago...    57   1e-07
ref|XP_003620005.1| GRF zinc finger containing protein [Medicago...    57   2e-07

>ref|XP_003630244.1| hypothetical protein MTR_8g093410 [Medicago truncatula]
           gi|355524266|gb|AET04720.1| hypothetical protein
           MTR_8g093410 [Medicago truncatula]
          Length = 109

 Score = 59.7 bits (143), Expect(2) = 2e-08
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = -3

Query: 192 PGRRFLSCPNYGKRNACQFFAWYDPPMCDRSRQIIPGLLRKINGMEQEMEKMRAIGKLIL 13
           PGRRF  C  Y +R  C FF W+DP + DR +++I GLL+K + ++ + EK+  +  +IL
Sbjct: 35  PGRRFHGCGKYWQRRKCSFFRWFDPEVPDRQKKVIKGLLKKNDALKNK-EKLLVLTIVIL 93

Query: 12  IMLL 1
            MLL
Sbjct: 94  GMLL 97



 Score = 23.9 bits (50), Expect(2) = 2e-08
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 242 CDCERRPQLKTAWTDSNQEEGFY 174
           C C     L TAWTD N    F+
Sbjct: 18  CYCGVESPLVTAWTDENPGRRFH 40


>ref|XP_003599949.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355488997|gb|AES70200.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 114

 Score = 59.3 bits (142), Expect(2) = 2e-08
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = -3

Query: 192 PGRRFLSCPNYGKRNACQFFAWYDPPMCDRSRQIIPGLLRKINGMEQEMEKMRAIGKLIL 13
           PGRRF  C  Y +R  C FF W+DP + DR +++I GLL+K + ++ + EK+  +  +IL
Sbjct: 40  PGRRFHGCGKYWQRRKCSFFRWFDPEVPDRQKKVIRGLLKKNDALKNK-EKLLVLTIVIL 98

Query: 12  IMLL 1
            MLL
Sbjct: 99  GMLL 102



 Score = 23.9 bits (50), Expect(2) = 2e-08
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 242 CDCERRPQLKTAWTDSNQEEGFY 174
           C C     L TAWTD N    F+
Sbjct: 23  CYCGVESPLVTAWTDENPGRRFH 45


>ref|XP_003612076.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355513411|gb|AES95034.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 57.0 bits (136), Expect(2) = 1e-07
 Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
 Frame = -3

Query: 192 PGRRFLSCPNYGKRNACQFFAWYDPPMCDRSRQIIPGLLRKINGMEQEMEKMR----AIG 25
           PGRRF  C  Y +R  C FF W+DP + +R +++I GLL+K + M+++ +K+      +G
Sbjct: 40  PGRRFHGCGKYFQRRKCSFFRWFDPEVPERQKKLIRGLLKKNDAMKKKEKKLEFTIVVLG 99

Query: 24  KLILIML 4
            L+ + L
Sbjct: 100 MLLFLSL 106



 Score = 23.9 bits (50), Expect(2) = 1e-07
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 242 CDCERRPQLKTAWTDSNQEEGFY 174
           C C     L TAWTD N    F+
Sbjct: 23  CYCGVESPLVTAWTDENPGRRFH 45


>ref|XP_003593148.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355482196|gb|AES63399.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 56.6 bits (135), Expect(2) = 1e-07
 Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
 Frame = -3

Query: 192 PGRRFLSCPNYGKRNACQFFAWYDPPMCDRSRQIIPGLLRKINGMEQEMEKMR----AIG 25
           PGRRF  C  Y +R  C FF W+DP + +R +++I GLL+K + M+++ +K+      +G
Sbjct: 40  PGRRFHGCGKYFQRRKCSFFRWFDPEVPERRKKLIRGLLKKNDAMKKKEKKLEFTIVVLG 99

Query: 24  KLILIML 4
            L+ + L
Sbjct: 100 MLLFLSL 106



 Score = 23.9 bits (50), Expect(2) = 1e-07
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 242 CDCERRPQLKTAWTDSNQEEGFY 174
           C C     L TAWTD N    F+
Sbjct: 23  CYCGVESPLVTAWTDENPGRRFH 45


>ref|XP_003620005.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355495020|gb|AES76223.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 115

 Score = 56.6 bits (135), Expect(2) = 2e-07
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = -3

Query: 192 PGRRFLSCPNYGKRNACQFFAWYDPPMCDRSRQIIPGLLRKINGMEQEMEKMRAIGKLIL 13
           PGRRF  C  Y +R  C FF W+DP +  R ++II GLL+K + ++ + E+M     +IL
Sbjct: 41  PGRRFHGCGKYWQRRKCSFFRWFDPEVPQRQKKIIRGLLKKNDALKNK-ERMLVFTIVIL 99

Query: 12  IMLL 1
            MLL
Sbjct: 100 GMLL 103



 Score = 23.1 bits (48), Expect(2) = 2e-07
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 242 CDCERRPQLKTAWTDSNQEEGFY 174
           C C     L TAWTD N    F+
Sbjct: 24  CYCGVDSPLVTAWTDENPGRRFH 46


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