BLASTX nr result

ID: Panax21_contig00015380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015380
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281149.1| PREDICTED: trafficking protein particle comp...   192   2e-47
ref|XP_004144741.1| PREDICTED: trafficking protein particle comp...   192   3e-47
ref|NP_001235954.1| uncharacterized protein LOC100305989 [Glycin...   189   2e-46
ref|XP_002314001.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_003630811.1| Trafficking protein particle complex subunit...   188   3e-46

>ref|XP_002281149.1| PREDICTED: trafficking protein particle complex subunit 4 [Vitis
           vinifera] gi|147807581|emb|CAN66318.1| hypothetical
           protein VITISV_040622 [Vitis vinifera]
           gi|296089818|emb|CBI39637.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/101 (92%), Positives = 95/101 (94%)
 Frame = -2

Query: 305 MPVIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVNGCTGIE 126
           M  IYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSP  GC+GIE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTLGCSGIE 60

Query: 125 LLEADTFDLHCFQSLTGTKFFVISEPGTQHMEGLLKHIYEL 3
           LLEADTFDLHCFQSLTGTKFFV+ EPGTQHMEGLLK IYEL
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKVIYEL 101


>ref|XP_004144741.1| PREDICTED: trafficking protein particle complex subunit 4-like
           [Cucumis sativus] gi|449490796|ref|XP_004158709.1|
           PREDICTED: trafficking protein particle complex subunit
           4-like [Cucumis sativus]
          Length = 141

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/101 (89%), Positives = 96/101 (95%)
 Frame = -2

Query: 305 MPVIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVNGCTGIE 126
           M  IYSLYIINKSGGLIFYKDYGSAGRMDTNDSLR+ASLWHSMHAISQQLSP+ GC+G+E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 125 LLEADTFDLHCFQSLTGTKFFVISEPGTQHMEGLLKHIYEL 3
           LLEADTFDLHCFQSLTGTKFFV+ EPGTQHME LLK+IYEL
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYEL 101


>ref|NP_001235954.1| uncharacterized protein LOC100305989 [Glycine max]
           gi|255627205|gb|ACU13947.1| unknown [Glycine max]
          Length = 141

 Score =  189 bits (480), Expect = 2e-46
 Identities = 89/101 (88%), Positives = 95/101 (94%)
 Frame = -2

Query: 305 MPVIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVNGCTGIE 126
           M  IYSLYIINKSGGLI+YKDYGSAGRMDTNDSLR+ASLWHSMHAISQQLSPV+GC GIE
Sbjct: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVSGCLGIE 60

Query: 125 LLEADTFDLHCFQSLTGTKFFVISEPGTQHMEGLLKHIYEL 3
           LL+ADTFDLHCFQSLTGTKFFV+SEPG QHME LLK +YEL
Sbjct: 61  LLQADTFDLHCFQSLTGTKFFVVSEPGAQHMESLLKFVYEL 101


>ref|XP_002314001.1| predicted protein [Populus trichocarpa] gi|222850409|gb|EEE87956.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  189 bits (480), Expect = 2e-46
 Identities = 91/101 (90%), Positives = 94/101 (93%)
 Frame = -2

Query: 305 MPVIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVNGCTGIE 126
           M  IYSLYIINKSGGLIFYKDYGS+GRMDTNDSLR+ASLWHSMHAISQQLSP  GC GIE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSSGRMDTNDSLRVASLWHSMHAISQQLSPTVGCLGIE 60

Query: 125 LLEADTFDLHCFQSLTGTKFFVISEPGTQHMEGLLKHIYEL 3
           LLEADTFDLHCFQSLTGTKFFV+ EPGTQHMEGLLK IYEL
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKVIYEL 101


>ref|XP_003630811.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|355524833|gb|AET05287.1| Trafficking protein particle
           complex subunit [Medicago truncatula]
          Length = 213

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/109 (81%), Positives = 99/109 (90%)
 Frame = -2

Query: 329 RFNRLINKMPVIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSP 150
           RF + +  M  +YSLYIINKSGGLI+YKDYGS+GRMDTNDSLR+ASLWHSMHAISQQLSP
Sbjct: 65  RFLQRLLVMAAVYSLYIINKSGGLIYYKDYGSSGRMDTNDSLRVASLWHSMHAISQQLSP 124

Query: 149 VNGCTGIELLEADTFDLHCFQSLTGTKFFVISEPGTQHMEGLLKHIYEL 3
           V+GCTGIELL+ADTFDLHCFQSLTGTKFFV+ EPGTQ ME LLK +YEL
Sbjct: 125 VSGCTGIELLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFVYEL 173


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