BLASTX nr result

ID: Panax21_contig00015206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015206
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus...   109   2e-22
ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis ...   108   5e-22
ref|XP_002310534.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays] gi|2265...   107   1e-21
ref|XP_002466632.1| hypothetical protein SORBIDRAFT_01g011330 [S...   106   2e-21

>ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus communis]
           gi|223548409|gb|EEF49900.1| 50S ribosomal protein L18,
           putative [Ricinus communis]
          Length = 115

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/66 (80%), Positives = 63/66 (95%)
 Frame = +2

Query: 50  QEKALRPSMESTRDVAAAAKIGKILGERLLLMDIPAVSVFYKRDQRYHGKVKAVIDSLKE 229
           QEKALRPSME+TRDVAAAAKIGKILGERLL+  IPA+SVF KR+Q+YHGKVKAV+DS++E
Sbjct: 50  QEKALRPSMENTRDVAAAAKIGKILGERLLVKGIPAISVFLKREQKYHGKVKAVVDSVRE 109

Query: 230 AGVKLI 247
           +GVKL+
Sbjct: 110 SGVKLL 115


>ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
           gi|296089732|emb|CBI39551.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/66 (81%), Positives = 60/66 (90%)
 Frame = +2

Query: 50  QEKALRPSMESTRDVAAAAKIGKILGERLLLMDIPAVSVFYKRDQRYHGKVKAVIDSLKE 229
           QEK LR +MESTRDVAAAA IGKILGERLLL DIPAV+VF KRDQ+YHGKVKAVIDSL+E
Sbjct: 49  QEKTLRSTMESTRDVAAAAMIGKILGERLLLQDIPAVTVFLKRDQKYHGKVKAVIDSLRE 108

Query: 230 AGVKLI 247
            G+KL+
Sbjct: 109 VGIKLL 114


>ref|XP_002310534.1| predicted protein [Populus trichocarpa] gi|222853437|gb|EEE90984.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/66 (80%), Positives = 61/66 (92%)
 Frame = +2

Query: 50  QEKALRPSMESTRDVAAAAKIGKILGERLLLMDIPAVSVFYKRDQRYHGKVKAVIDSLKE 229
           QEKALR +ME+TRDVAAAAKIGKILGERLLL DIPAV+VF  R+Q+YHGKVKAVIDSL+E
Sbjct: 49  QEKALRSTMENTRDVAAAAKIGKILGERLLLKDIPAVTVFLNRNQKYHGKVKAVIDSLRE 108

Query: 230 AGVKLI 247
            G+K+I
Sbjct: 109 VGIKII 114


>ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays]
           gi|226510381|ref|NP_001150322.1| 50S ribosomal protein
           L18 [Zea mays] gi|195608440|gb|ACG26050.1| 50S ribosomal
           protein L18 [Zea mays] gi|195609138|gb|ACG26399.1| 50S
           ribosomal protein L18 [Zea mays]
           gi|195638354|gb|ACG38645.1| 50S ribosomal protein L18
           [Zea mays] gi|195652601|gb|ACG45768.1| 50S ribosomal
           protein L18 [Zea mays] gi|223943857|gb|ACN26012.1|
           unknown [Zea mays] gi|414588054|tpg|DAA38625.1| TPA: 50S
           ribosomal protein L18 isoform 1 [Zea mays]
           gi|414588055|tpg|DAA38626.1| TPA: 50S ribosomal protein
           L18 isoform 2 [Zea mays]
          Length = 114

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/66 (80%), Positives = 61/66 (92%)
 Frame = +2

Query: 50  QEKALRPSMESTRDVAAAAKIGKILGERLLLMDIPAVSVFYKRDQRYHGKVKAVIDSLKE 229
           QEK LRP+MESTRDVAAAAKIGK+LGERLLL  IPAVS+  KR+Q+YHGKVKAVIDS++E
Sbjct: 49  QEKLLRPNMESTRDVAAAAKIGKLLGERLLLKGIPAVSIHMKREQKYHGKVKAVIDSVRE 108

Query: 230 AGVKLI 247
           AGVKL+
Sbjct: 109 AGVKLL 114


>ref|XP_002466632.1| hypothetical protein SORBIDRAFT_01g011330 [Sorghum bicolor]
           gi|241920486|gb|EER93630.1| hypothetical protein
           SORBIDRAFT_01g011330 [Sorghum bicolor]
          Length = 114

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/66 (81%), Positives = 59/66 (89%)
 Frame = +2

Query: 50  QEKALRPSMESTRDVAAAAKIGKILGERLLLMDIPAVSVFYKRDQRYHGKVKAVIDSLKE 229
           QEK LRPSMESTRDVAAAAKIGK+LGERLL   IPAVSV   RDQ+YHGKVKAVIDSL++
Sbjct: 49  QEKLLRPSMESTRDVAAAAKIGKLLGERLLFKGIPAVSVSISRDQKYHGKVKAVIDSLRD 108

Query: 230 AGVKLI 247
           AGVKL+
Sbjct: 109 AGVKLL 114


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