BLASTX nr result

ID: Panax21_contig00015194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015194
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   444   e-122
emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]   444   e-122
ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putativ...   433   e-119
ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   419   e-115
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111

>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
           vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
           product [Vitis vinifera]
          Length = 489

 Score =  444 bits (1141), Expect = e-122
 Identities = 215/260 (82%), Positives = 242/260 (93%)
 Frame = -2

Query: 782 SFSDLGLADWAVRTCKELGMKNPTLVQQNCTPKILAGNDVLGIAQTGSGKTAAFALPVLH 603
           +F+DLGLA+WAV+ CKELGM+ PT VQ +C P+ILAG+DVLG+AQTGSGKTAAFALP+LH
Sbjct: 52  TFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILH 111

Query: 602 RLAEDPYGVFALVVTPTRELAYQLGEQFRALGSCLNLRCSVVVGGMNSLNQAHELMQRPH 423
           RLAEDP+GVFALVVTPTRELAYQL EQFRALGSCL+LRC+VVVGGM+ +NQA  LMQRPH
Sbjct: 112 RLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPH 171

Query: 422 VVIATPGRIKALIDGNPDIASVFSKTKFLVLDEADRVLEPSFEEELRVVFQCLPKNRQTL 243
           VVIATPGR+K L++ NPDI +VF++TKFLVLDEADRVL+  FEEELRVVFQCLPKNRQTL
Sbjct: 172 VVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 231

Query: 242 LFSATMTSDLEALLELSQNKVYFYEAYEGLETVESLKQQYIFIPKNVKDVYLLHILSKME 63
           LFSATMTSDL+ LLELS NK YFYEAYEG +TVESLKQQYIF+PKNVKDVYLLHILSKME
Sbjct: 232 LFSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKME 291

Query: 62  DMGIRSAIVFVSTCRSCHLL 3
           +MGIRSAI+FVSTCRSCHLL
Sbjct: 292 EMGIRSAIIFVSTCRSCHLL 311


>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score =  444 bits (1141), Expect = e-122
 Identities = 215/260 (82%), Positives = 242/260 (93%)
 Frame = -2

Query: 782 SFSDLGLADWAVRTCKELGMKNPTLVQQNCTPKILAGNDVLGIAQTGSGKTAAFALPVLH 603
           +F+DLGLA+WAV+ CKELGM+ PT VQ +C P+ILAG+DVLG+AQTGSGKTAAFALP+LH
Sbjct: 155 TFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILH 214

Query: 602 RLAEDPYGVFALVVTPTRELAYQLGEQFRALGSCLNLRCSVVVGGMNSLNQAHELMQRPH 423
           RLAEDP+GVFALVVTPTRELAYQL EQFRALGSCL+LRC+VVVGGM+ +NQA  LMQRPH
Sbjct: 215 RLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPH 274

Query: 422 VVIATPGRIKALIDGNPDIASVFSKTKFLVLDEADRVLEPSFEEELRVVFQCLPKNRQTL 243
           VVIATPGR+K L++ NPDI +VF++TKFLVLDEADRVL+  FEEELRVVFQCLPKNRQTL
Sbjct: 275 VVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL 334

Query: 242 LFSATMTSDLEALLELSQNKVYFYEAYEGLETVESLKQQYIFIPKNVKDVYLLHILSKME 63
           LFSATMTSDL+ LLELS NK YFYEAYEG +TVESLKQQYIF+PKNVKDVYLLHILSKME
Sbjct: 335 LFSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKME 394

Query: 62  DMGIRSAIVFVSTCRSCHLL 3
           +MGIRSAI+FVSTCRSCHLL
Sbjct: 395 EMGIRSAIIFVSTCRSCHLL 414


>ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 502

 Score =  433 bits (1114), Expect = e-119
 Identities = 210/259 (81%), Positives = 237/259 (91%)
 Frame = -2

Query: 779 FSDLGLADWAVRTCKELGMKNPTLVQQNCTPKILAGNDVLGIAQTGSGKTAAFALPVLHR 600
           FS+LGLA+WAVRTCKELGMK PT VQ +C PKIL G DVLG+AQTGSGKTA FALP+LHR
Sbjct: 65  FSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKILEGKDVLGLAQTGSGKTATFALPILHR 124

Query: 599 LAEDPYGVFALVVTPTRELAYQLGEQFRALGSCLNLRCSVVVGGMNSLNQAHELMQRPHV 420
           LAEDPYG+FALV+TPTRELAYQL EQFRALGSCLNLRC+VVVGGM+ L QA  LM RPHV
Sbjct: 125 LAEDPYGIFALVITPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDKLTQAKTLMARPHV 184

Query: 419 VIATPGRIKALIDGNPDIASVFSKTKFLVLDEADRVLEPSFEEELRVVFQCLPKNRQTLL 240
           VIATPGR+K L++ NPDI SVFSKTKFLVLDEADRVL+  FE+ELRVVFQCLPKNRQTLL
Sbjct: 185 VIATPGRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLDVGFEDELRVVFQCLPKNRQTLL 244

Query: 239 FSATMTSDLEALLELSQNKVYFYEAYEGLETVESLKQQYIFIPKNVKDVYLLHILSKMED 60
           FSATMTS+LE+LLE+S NK YFYEAYEG +TV++LKQQY+ +PKNVKDVYL++ILSKMED
Sbjct: 245 FSATMTSNLESLLEVSANKAYFYEAYEGFKTVDTLKQQYVLVPKNVKDVYLVYILSKMED 304

Query: 59  MGIRSAIVFVSTCRSCHLL 3
           MGIRSAI+FVSTCR+C+LL
Sbjct: 305 MGIRSAIIFVSTCRTCYLL 323


>ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus] gi|449475871|ref|XP_004154575.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus]
          Length = 491

 Score =  419 bits (1078), Expect = e-115
 Identities = 203/260 (78%), Positives = 232/260 (89%)
 Frame = -2

Query: 782 SFSDLGLADWAVRTCKELGMKNPTLVQQNCTPKILAGNDVLGIAQTGSGKTAAFALPVLH 603
           +F+DLGL++W ++TCKEL MK PT VQ +C PKILAG DVLGIAQTGSGKTAAFALP+L 
Sbjct: 57  TFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 116

Query: 602 RLAEDPYGVFALVVTPTRELAYQLGEQFRALGSCLNLRCSVVVGGMNSLNQAHELMQRPH 423
           RL+E P+GVFALVVTPTRELAYQL EQFRALGSCLNLRCSVVVGGM+ LNQ   L++RPH
Sbjct: 117 RLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPH 176

Query: 422 VVIATPGRIKALIDGNPDIASVFSKTKFLVLDEADRVLEPSFEEELRVVFQCLPKNRQTL 243
           +VIATPGRIK L++ NPDI  VFSKTKFLVLDEADRVL+  FEEEL+V+FQCLP+NRQTL
Sbjct: 177 IVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTL 236

Query: 242 LFSATMTSDLEALLELSQNKVYFYEAYEGLETVESLKQQYIFIPKNVKDVYLLHILSKME 63
           LFSATMT DLE L +LS NK YFYEAYEG +TV+ LKQQY+FIPK+VKD+YLLH+LSKME
Sbjct: 237 LFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKME 296

Query: 62  DMGIRSAIVFVSTCRSCHLL 3
           DMGIRSAI+FV TC+SCHLL
Sbjct: 297 DMGIRSAIIFVQTCKSCHLL 316


>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  407 bits (1046), Expect = e-111
 Identities = 198/259 (76%), Positives = 234/259 (90%)
 Frame = -2

Query: 779 FSDLGLADWAVRTCKELGMKNPTLVQQNCTPKILAGNDVLGIAQTGSGKTAAFALPVLHR 600
           FSDLGL++WA++TCKELGMKNPT VQ +C PKIL+G DVLG+AQTGSGKTAAFALP+LHR
Sbjct: 64  FSDLGLSEWALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAAFALPILHR 123

Query: 599 LAEDPYGVFALVVTPTRELAYQLGEQFRALGSCLNLRCSVVVGGMNSLNQAHELMQRPHV 420
           LAEDP+GVFALV+TPTRELAYQL EQFRA GSCL+LRC+VVVGGM+ L QA  LM RPHV
Sbjct: 124 LAEDPFGVFALVITPTRELAYQLAEQFRAFGSCLHLRCAVVVGGMDLLTQAKTLMGRPHV 183

Query: 419 VIATPGRIKALIDGNPDIASVFSKTKFLVLDEADRVLEPSFEEELRVVFQCLPKNRQTLL 240
           VIATPGRIK L++ NPDI+ VFS+TKFLVLDEADR+++  F+EELRVVF+CLPK+RQTLL
Sbjct: 184 VIATPGRIKVLLE-NPDISPVFSRTKFLVLDEADRLIDVGFQEELRVVFKCLPKSRQTLL 242

Query: 239 FSATMTSDLEALLELSQNKVYFYEAYEGLETVESLKQQYIFIPKNVKDVYLLHILSKMED 60
           FSATMTS+L+ LLELS+NK YFYE YEG +TV++L QQYI +PKNVK+VYL++ILSKME+
Sbjct: 243 FSATMTSELQTLLELSENKAYFYEEYEGFKTVDTLNQQYIQMPKNVKEVYLVYILSKMEE 302

Query: 59  MGIRSAIVFVSTCRSCHLL 3
           MGIRSAI+FVS C +C LL
Sbjct: 303 MGIRSAIIFVSACSTCRLL 321


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