BLASTX nr result

ID: Panax21_contig00014701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014701
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   161   4e-38
ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putativ...   161   4e-38
ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   148   4e-34
ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   145   4e-33

>ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Vitis
           vinifera]
          Length = 595

 Score =  161 bits (408), Expect = 4e-38
 Identities = 82/115 (71%), Positives = 96/115 (83%)
 Frame = -1

Query: 456 VKHHSLSTKGFIPEQNVNLDDIKFKDKSRQKQRNENLQLKKAATQQEEPKPKKRKTLATT 277
           VKHHSLST+GF P +++N ++IK+KDKSR+KQR +NLQ KKA  Q +EPKP+K      T
Sbjct: 482 VKHHSLSTEGFTPVEDINFEEIKYKDKSREKQRKKNLQAKKAV-QDQEPKPQKPNKTPHT 540

Query: 276 AMTVMRKKTAKQRRAAQTVEDEDELAREYCLLKKLKKGAIDENEFAILTGTEELL 112
           A TVMRKKTAKQRR AQT+EDED+LAREY LLKKLKKG IDE+EFA LTGTEELL
Sbjct: 541 APTVMRKKTAKQRRTAQTIEDEDDLAREYRLLKKLKKGTIDESEFAKLTGTEELL 595


>ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539916|gb|EEF41494.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 592

 Score =  161 bits (408), Expect = 4e-38
 Identities = 84/115 (73%), Positives = 96/115 (83%)
 Frame = -1

Query: 456 VKHHSLSTKGFIPEQNVNLDDIKFKDKSRQKQRNENLQLKKAATQQEEPKPKKRKTLATT 277
           VKHHSLST GF P +++ L+DIKFKDKSR+KQR +NLQ KK   QQ+EPKP+K     + 
Sbjct: 479 VKHHSLSTVGFTPAEDIKLEDIKFKDKSREKQRKKNLQAKKEK-QQQEPKPQKPNKNPSA 537

Query: 276 AMTVMRKKTAKQRRAAQTVEDEDELAREYCLLKKLKKGAIDENEFAILTGTEELL 112
           A TVMRKKTAKQRRAAQTVEDEDEL+REY LLKKLKKG IDE+EFA LTGTE+LL
Sbjct: 538 APTVMRKKTAKQRRAAQTVEDEDELSREYRLLKKLKKGTIDESEFAKLTGTEDLL 592


>ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|222852002|gb|EEE89549.1|
           predicted protein [Populus trichocarpa]
          Length = 592

 Score =  155 bits (392), Expect = 3e-36
 Identities = 82/115 (71%), Positives = 93/115 (80%)
 Frame = -1

Query: 456 VKHHSLSTKGFIPEQNVNLDDIKFKDKSRQKQRNENLQLKKAATQQEEPKPKKRKTLATT 277
           VKHHSLSTK F P  ++NL++IK+KDKSRQKQR +NLQ KK A QQE  KP+K     + 
Sbjct: 479 VKHHSLSTKDFTPVDDLNLEEIKYKDKSRQKQRRKNLQAKKEARQQES-KPQKVSKTPSA 537

Query: 276 AMTVMRKKTAKQRRAAQTVEDEDELAREYCLLKKLKKGAIDENEFAILTGTEELL 112
           A T MRKKTAKQRRAAQTVEDE+ELAREY LLKKLKKG IDE+EF  LTGT+ELL
Sbjct: 538 AATAMRKKTAKQRRAAQTVEDEEELAREYRLLKKLKKGTIDESEFEKLTGTDELL 592


>ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
           sativus] gi|449515784|ref|XP_004164928.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
           sativus]
          Length = 587

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/115 (65%), Positives = 93/115 (80%)
 Frame = -1

Query: 456 VKHHSLSTKGFIPEQNVNLDDIKFKDKSRQKQRNENLQLKKAATQQEEPKPKKRKTLATT 277
           VKHHSLST GF+P +++N +++K+KDKSR+KQR +NLQ KK A Q++ PKP+ +KT    
Sbjct: 475 VKHHSLSTDGFVPVEDINFEEVKYKDKSREKQRKKNLQAKKEA-QKKLPKPEPKKT-PNV 532

Query: 276 AMTVMRKKTAKQRRAAQTVEDEDELAREYCLLKKLKKGAIDENEFAILTGTEELL 112
           A  ++RKKTA+QRRA QT EDEDELA EY LLKKLKKG IDE E+A LTGTEELL
Sbjct: 533 AAPILRKKTARQRRATQTAEDEDELAHEYRLLKKLKKGTIDETEYAKLTGTEELL 587


>ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine
           max]
          Length = 589

 Score =  145 bits (365), Expect = 4e-33
 Identities = 77/115 (66%), Positives = 92/115 (80%)
 Frame = -1

Query: 456 VKHHSLSTKGFIPEQNVNLDDIKFKDKSRQKQRNENLQLKKAATQQEEPKPKKRKTLATT 277
           VKHHSLS  GF P +++NL DIK++DKSR+KQR +NLQ KK A +++EPKP+K K     
Sbjct: 477 VKHHSLSIDGFEPVEDINLGDIKYRDKSREKQRKKNLQAKKEA-KEKEPKPQKPKK-TPN 534

Query: 276 AMTVMRKKTAKQRRAAQTVEDEDELAREYCLLKKLKKGAIDENEFAILTGTEELL 112
           A T MRKKTA+QRRA QT+EDE+EL  EY LLKKLKKG IDENE+A LTGTEELL
Sbjct: 535 APTDMRKKTARQRRAQQTMEDEEELMHEYRLLKKLKKGTIDENEYAKLTGTEELL 589


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