BLASTX nr result

ID: Panax21_contig00014566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014566
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36671.3| unnamed protein product [Vitis vinifera]              198   3e-49
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   198   3e-49
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   198   3e-49
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...   198   4e-49
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...   198   4e-49

>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
          Length = 1405

 Score =  198 bits (504), Expect = 3e-49
 Identities = 101/119 (84%), Positives = 113/119 (94%), Gaps = 1/119 (0%)
 Frame = -3

Query: 387 KKKEREPLD-SEPLPSRQSKRRRLQEESVLTSTDEGVYQPKTKETRAAYEAMLSVIQQQL 211
           +KKEREP + SEP+ SRQSKRRR+QEESVL+ST+EGVYQPKTKETRAAYEAMLSVIQQQL
Sbjct: 76  RKKEREPQNASEPVLSRQSKRRRIQEESVLSSTEEGVYQPKTKETRAAYEAMLSVIQQQL 135

Query: 210 GGQPLNIVSGAADEILVVLKNDTFKNPEKKKEIEKLLNQIPNHMFDQLVAIGRLITDYQ 34
           GGQPLNIVSGAADEIL VLKN+T KNP+KKKEIE+LLN IPNH+FDQLV+IGRLITD+Q
Sbjct: 136 GGQPLNIVSGAADEILAVLKNETVKNPDKKKEIERLLNPIPNHIFDQLVSIGRLITDFQ 194


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
           [Vitis vinifera]
          Length = 2177

 Score =  198 bits (504), Expect = 3e-49
 Identities = 101/119 (84%), Positives = 113/119 (94%), Gaps = 1/119 (0%)
 Frame = -3

Query: 387 KKKEREPLD-SEPLPSRQSKRRRLQEESVLTSTDEGVYQPKTKETRAAYEAMLSVIQQQL 211
           +KKEREP + SEP+ SRQSKRRR+QEESVL+ST+EGVYQPKTKETRAAYEAMLSVIQQQL
Sbjct: 76  RKKEREPQNASEPVLSRQSKRRRIQEESVLSSTEEGVYQPKTKETRAAYEAMLSVIQQQL 135

Query: 210 GGQPLNIVSGAADEILVVLKNDTFKNPEKKKEIEKLLNQIPNHMFDQLVAIGRLITDYQ 34
           GGQPLNIVSGAADEIL VLKN+T KNP+KKKEIE+LLN IPNH+FDQLV+IGRLITD+Q
Sbjct: 136 GGQPLNIVSGAADEILAVLKNETVKNPDKKKEIERLLNPIPNHIFDQLVSIGRLITDFQ 194


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  198 bits (504), Expect = 3e-49
 Identities = 101/119 (84%), Positives = 113/119 (94%), Gaps = 1/119 (0%)
 Frame = -3

Query: 387 KKKEREPLD-SEPLPSRQSKRRRLQEESVLTSTDEGVYQPKTKETRAAYEAMLSVIQQQL 211
           +KKEREP + SEP+ SRQSKRRR+QEESVL+ST+EGVYQPKTKETRAAYEAMLSVIQQQL
Sbjct: 76  RKKEREPQNASEPVLSRQSKRRRIQEESVLSSTEEGVYQPKTKETRAAYEAMLSVIQQQL 135

Query: 210 GGQPLNIVSGAADEILVVLKNDTFKNPEKKKEIEKLLNQIPNHMFDQLVAIGRLITDYQ 34
           GGQPLNIVSGAADEIL VLKN+T KNP+KKKEIE+LLN IPNH+FDQLV+IGRLITD+Q
Sbjct: 136 GGQPLNIVSGAADEILAVLKNETVKNPDKKKEIERLLNPIPNHIFDQLVSIGRLITDFQ 194


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
           200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score =  198 bits (503), Expect = 4e-49
 Identities = 101/118 (85%), Positives = 111/118 (94%)
 Frame = -3

Query: 387 KKKEREPLDSEPLPSRQSKRRRLQEESVLTSTDEGVYQPKTKETRAAYEAMLSVIQQQLG 208
           KKKE +P+ +EP PSRQ KRRRLQEESVLTST+EGVY PKTKETRAAYEAMLSVIQQQLG
Sbjct: 77  KKKELDPI-AEPQPSRQGKRRRLQEESVLTSTEEGVYMPKTKETRAAYEAMLSVIQQQLG 135

Query: 207 GQPLNIVSGAADEILVVLKNDTFKNPEKKKEIEKLLNQIPNHMFDQLVAIGRLITDYQ 34
           GQPL+IVSGAADEIL VLKND+FKNP+KKKEIEKLLN IPN++FDQLV+IGRLITDYQ
Sbjct: 136 GQPLSIVSGAADEILAVLKNDSFKNPDKKKEIEKLLNPIPNNVFDQLVSIGRLITDYQ 193


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Cucumis sativus]
          Length = 2175

 Score =  198 bits (503), Expect = 4e-49
 Identities = 101/118 (85%), Positives = 111/118 (94%)
 Frame = -3

Query: 387 KKKEREPLDSEPLPSRQSKRRRLQEESVLTSTDEGVYQPKTKETRAAYEAMLSVIQQQLG 208
           KKKE +P+ +EP PSRQ KRRRLQEESVLTST+EGVY PKTKETRAAYEAMLSVIQQQLG
Sbjct: 77  KKKELDPI-AEPQPSRQGKRRRLQEESVLTSTEEGVYMPKTKETRAAYEAMLSVIQQQLG 135

Query: 207 GQPLNIVSGAADEILVVLKNDTFKNPEKKKEIEKLLNQIPNHMFDQLVAIGRLITDYQ 34
           GQPL+IVSGAADEIL VLKND+FKNP+KKKEIEKLLN IPN++FDQLV+IGRLITDYQ
Sbjct: 136 GQPLSIVSGAADEILAVLKNDSFKNPDKKKEIEKLLNPIPNNVFDQLVSIGRLITDYQ 193


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