BLASTX nr result

ID: Panax21_contig00013998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013998
         (2258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-47
gb|AFK37781.1| unknown [Lotus japonicus]                              183   2e-43
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...   166   3e-38
gb|AFK40065.1| unknown [Medicago truncatula]                          165   4e-38
ref|XP_003612151.1| F-box [Medicago truncatula] gi|355513486|gb|...   165   4e-38

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  196 bits (499), Expect = 2e-47
 Identities = 136/392 (34%), Positives = 203/392 (51%), Gaps = 3/392 (0%)
 Frame = +1

Query: 871  LPIHILYDIISRLPLETIFSCKCVCRVFLNIIKDPFFAKIHLTKAPSTSAALIVQEDQLP 1050
            LPI  L DI+SRLP +TIFSC CVC+ + ++I  P FAK+H T+AP   A+LI++  +  
Sbjct: 35   LPIQNLVDILSRLPFKTIFSCMCVCKKWKDLILAPDFAKLHHTRAP---ASLILRSHR-H 90

Query: 1051 FGNFHPYMLDLDDTPARSSCSSDHHPCHQHFLSWQIHGLTQRNVNCCFFKGNATLISSCN 1230
                 P  L L D  A   CS D                 + + +  F  GN  ++++CN
Sbjct: 91   GRRRRPRSLCLLDLEASDICSPD--------------AAVKLSPDFGFPTGNFEIVNTCN 136

Query: 1231 GLLCLYSPASGEPLYCICNPISGECMALPPPISSTSGYTYLNHSGFGFCPKTNKYKVIRF 1410
            GL+C+    S   +  I NP+ G+ + LP        Y +   S FG  PKT++YKVI+F
Sbjct: 137  GLICIRHFHSPNDI-SILNPLVGDYITLPLTKKKHKSYVF---SWFGHSPKTDEYKVIQF 192

Query: 1411 MSFTSSDPFTVSTLRTVALVHTVGTKSWRNI--GNAPCPETGGSFDSLLCNSLHWITNSR 1584
            +   S         +  A +HT+G  +W +I  G    P      ++ +   LHWI N  
Sbjct: 193  VQQPS---------KLEAEIHTLGKGTWTSIHGGALSPPIDMRCHNAFVGGCLHWIVNDP 243

Query: 1585 TTSDLISSFDLETEKFRSVPVPAHFGPEYVSKISWISVGVLGERLCVC-YTLGDAQFEVC 1761
            + S+ I   +   E F+ V  P H GP    +   + +GVLG  L    Y LGD+ F++ 
Sbjct: 244  SKSEFIYCLEFGRELFQPVAAPPHLGPNDKDRTGDMMLGVLGGCLYFFDYPLGDS-FDIW 302

Query: 1762 VMKEYGVRESWIKEFVIDIKFYCGVQVEDLQQPIKFSNNGELLLISRFNFLVSYSPQKGT 1941
            VMK+YGV+ESW KEF++       +   DL +PI   +NGE+L+  +   +VSY+P+  +
Sbjct: 303  VMKQYGVQESWTKEFILKNPSTDIIWYWDLYRPISLLSNGEILMSHKSKAMVSYNPEDRS 362

Query: 1942 FRDIKKLGDWKAEAIAHVPSLISLKTAVKGKN 2037
            FR +K  G    EA  +VPS +S +  VKG+N
Sbjct: 363  FRFLKIYGIQNFEANPYVPSFLSPREIVKGEN 394


>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score =  183 bits (464), Expect = 2e-43
 Identities = 142/447 (31%), Positives = 208/447 (46%), Gaps = 40/447 (8%)
 Frame = +1

Query: 826  EDETTEMVSGLPVLELPIHILYDIISRLPLETIFSCKCVCRVFLNIIKDPFFAKIHLTKA 1005
            +DE      G  + +LP HI  DI+ RLP+++I  CKCVCR    +I DP FAK+H    
Sbjct: 18   DDEPESQQLGASLADLPTHITTDILLRLPVKSILICKCVCRSLKAMISDPHFAKLHFQH- 76

Query: 1006 PSTSAALIVQEDQLPFGNFHPYMLDL-------DDTPARSSCSSD---HHPCHQHF---- 1143
             S S  +I  +D+   G    Y+L+        DD  ++  C  +      C+ HF    
Sbjct: 77   -SQSGFMIRAKDKKLSGIV--YLLERETEKFENDDDDSQFCCCENSIMRPECNCHFILEH 133

Query: 1144 ----------LSW----------QIHGLTQRNVNCCFFKGNATLISSCNGLLCLYSPASG 1263
                      L W          +  G      N     G   +++SCNGL+CL      
Sbjct: 134  KVKLPFRGAKLVWGNRDESKKRGRPTGRENHYFNFEGEDGKFAVVNSCNGLICLCDRE-- 191

Query: 1264 EPLYCICNPISGECMALPPP--ISSTSGYTYLN-HSGFGFCPKTNKYKVIRFMSFTSSDP 1434
               + +CNPI+GE + LP    I  T+ ++    ++GFGF PK N+YKV+R +       
Sbjct: 192  RDYFVVCNPITGEFIRLPQTSRIGKTNKFSIQEIYAGFGFQPKNNEYKVVRILRGLQFYH 251

Query: 1435 FTVSTLRTVALVHTVGTKSWRNIGNAPCPETGGSFDSLLCNSLHWITNSRTTSDLISSFD 1614
              ++     A VHT+GT +WRN+           F + +  +LHWI +   T  ++  FD
Sbjct: 252  GIMA-----AEVHTLGTSTWRNVEVNSMYFYHLRFPTCVSGALHWIGSYHGTLSILC-FD 305

Query: 1615 LETEKFRSVPVPAHFGPEYVSKISWISVGVLGERLCVCYTLGDAQ-FEVCVMKEYGVRES 1791
             E+E+FRS P P      Y S    I++G L   L +C +      F + +MKEYG +ES
Sbjct: 306  FESERFRSFPTPPCL---YQSCTESITMGELRGSLYICDSFSKGTPFVMWIMKEYGFKES 362

Query: 1792 WIKEFVIDIKFYCGVQVEDLQQPIK-FSNNGELLLISRFNFLVSYSPQKGTFRDIKKLGD 1968
            W K F  D           L  P+K F N   +L+   +NF + Y P K  F+  K  G 
Sbjct: 363  WTKIFSFDTMSSYRWPFGGLYWPVKHFKNGSAILMYHSYNFFIYYEPGKDGFKIFKVRGT 422

Query: 1969 W-KAEAIAHVPSLISLKTAVKGKNLKV 2046
              + + I H+PS ISLK  VKG N++V
Sbjct: 423  QSRFDVIPHIPSFISLKDVVKGDNIEV 449


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
            predicted protein [Populus trichocarpa]
          Length = 410

 Score =  166 bits (419), Expect = 3e-38
 Identities = 121/398 (30%), Positives = 191/398 (47%), Gaps = 12/398 (3%)
 Frame = +1

Query: 871  LPIHILYDIISRLPLETIFSCKCVCRVFLNIIKDPFFAKIHLTKAPS----TSAALIVQE 1038
            LP  I  DI+ +LPL++   C+CVCR + N++ D +F+++   +A S     S    V  
Sbjct: 28   LPDDITADILLQLPLKSKIQCRCVCRTWRNLLSDSYFSEVQRERAQSMLVLRSPPSCVSR 87

Query: 1039 DQLPFGNFHPYMLDLDDTPARSSCSSDHHPCHQHFLSWQIHGLTQRNVNCCFFKGNATLI 1218
                      Y++DL+    R++    +               T+ N+  C    +  L+
Sbjct: 88   KAAALAPNDFYVVDLESGSVRNNVMKLN---------------TKNNLPTC----HVELV 128

Query: 1219 SSCNGLLCLYSPASGEPLYCICNPISGECMALPPPISSTS--GYTYLNH-SGFGFCPKTN 1389
             SCNGLLCL+   S +  Y +CNP++GE +  P         G T L+   GFGF PK+N
Sbjct: 129  GSCNGLLCLFDKNSKKVFY-LCNPVTGEHVRTPANCKKEKQRGKTILDAVLGFGFSPKSN 187

Query: 1390 KYKVIRFMSFTSSDPFTVSTLRTVALVHTVGTKSWRNIGNAPCPETGGSFDSLLCNSLHW 1569
             Y V+R      + P  +S LR+   +   G   W++IG  P P+    F   L  +LHW
Sbjct: 188  HYMVLRITRKKLTYP--ISILRSEGEICIFGDNEWKSIGEIPFPDCKKFFGVSLNGALHW 245

Query: 1570 ITN--SRTTSDLISSFDLETEKFRSVPVPAHFGPEYVSKISWISVGVLGERLCVCYTLGD 1743
            I N      +DLI + D++++K R +  P  F  +       +++GVL + L +C ++  
Sbjct: 246  ILNLDDYEDADLICALDIDSKKIRPMSPPNGFRRDTTE----MTLGVLRDCLFICDSMTL 301

Query: 1744 AQFEVCVMKEYGVRESWIKEFVIDIKFYCGVQVEDLQQPIKFSNNGELLLISRFNFLVSY 1923
               ++ VMKEYGV++SW KE VI              QPI  S +GE+L+ S  N  V Y
Sbjct: 302  YNLDIWVMKEYGVKDSWTKEIVIAKTSLPSNLQNSFLQPIMVSKDGEVLISSDSNVFVWY 361

Query: 1924 SPQKGTFRDI---KKLGDWKAEAIAHVPSLISLKTAVK 2028
             P   +F  +    ++G ++ EA+  V S  SL   +K
Sbjct: 362  DPGSKSFTKVTLPSRVG-YEFEAVCSVASFDSLSAIMK 398


>gb|AFK40065.1| unknown [Medicago truncatula]
          Length = 479

 Score =  165 bits (418), Expect = 4e-38
 Identities = 134/434 (30%), Positives = 200/434 (46%), Gaps = 38/434 (8%)
 Frame = +1

Query: 868  ELPIHILYDIISRLPLETIFSCKCVCRVFLNIIKDPFFAKIHLTKAP------------S 1011
            +LP H+   I+ RLP +++  CKCVC+V+  II +  FAK H  ++P             
Sbjct: 29   KLPSHLTAHILLRLPFKSVLICKCVCKVWKTIISESQFAKSHFERSPISLMIRTRHRVSR 88

Query: 1012 TSAALIVQEDQLPFG-NFHPYMLDLDDTPARS---SCSSDHHPCHQHFLSWQI------- 1158
            T   L  + D+   G N H  +  +   P RS        ++   + F + ++       
Sbjct: 89   TLYLLECEPDKFEIGSNNHVKLAPIFKLPLRSFRDKRDQINNESKRPFRAARLVSGKNDE 148

Query: 1159 ---HGLTQRNVNCCFFKGNATLISSCNGLLCLYSPASGEPLYCICNPISGECMALPPPIS 1329
                G     + C        +++SCNGLLCL  P+ G P+  ICNP++GE + LP   +
Sbjct: 149  NSDRGRQSLYIACNRDIDKFDIVNSCNGLLCLSDPSFGNPI-VICNPVTGEFIRLPESTT 207

Query: 1330 STSGYTYLNHSGFGFCPKTNKYKV----IRFMSFTSSDPFTVSTLRTVALVHTVGTKSWR 1497
            + +       +GFGF PKTN+YKV    IR +   +   F     R +  ++T+GT SWR
Sbjct: 208  NRTRVRMQGQAGFGFQPKTNEYKVISVWIRHVKHANQWVFE----RVILEINTLGTTSWR 263

Query: 1498 NIGNAP-CPETGGSFDSLLCNSLHWITNSRTTSDLISSFDLETEKFRSVPVPAH-FGPEY 1671
            N+   P    +   + + +  +LHWI        ++  F  E E+ +S P P H FG   
Sbjct: 264  NVEVDPQISFSSLKYPTCVNGALHWIRFEGQQRSIL-VFCFENERLQSFPSPPHVFGNHN 322

Query: 1672 VSKISWISVGVLGERLCVCYTLGDAQFEVCVMKEYGVRESWIKEFVIDIKFYCGVQVE-- 1845
            V     IS+G L   L +C     +   + VM EYG+ ESW K + ID  F    +V   
Sbjct: 323  VFCCRPISMGELKGFLYICDPTFISNVSMWVMNEYGIGESWTKIYNIDTSFNPLDRVPRG 382

Query: 1846 -DLQQPIK-FSNNGELLLISRFNFLVSYSPQKGTFRDIKKLGDW--KAEAIAHVPSLISL 2013
              L  PIK F     +L     N    Y P+K  F+  +  G      E I H+PSLISL
Sbjct: 383  YGLSWPIKHFEEGAAILSYHSSNCFTYYEPEKYGFKVFRIHGSRINYFEVIPHIPSLISL 442

Query: 2014 KTAVKGKNLKVEKI 2055
            K  +KG N++V  I
Sbjct: 443  KDVLKGVNIEVLNI 456


>ref|XP_003612151.1| F-box [Medicago truncatula] gi|355513486|gb|AES95109.1| F-box
            [Medicago truncatula]
          Length = 480

 Score =  165 bits (418), Expect = 4e-38
 Identities = 134/434 (30%), Positives = 200/434 (46%), Gaps = 38/434 (8%)
 Frame = +1

Query: 868  ELPIHILYDIISRLPLETIFSCKCVCRVFLNIIKDPFFAKIHLTKAP------------S 1011
            +LP H+   I+ RLP +++  CKCVC+V+  II +  FAK H  ++P             
Sbjct: 29   KLPSHLTAHILLRLPFKSVLICKCVCKVWKTIISESQFAKSHFERSPISLMIRTRHRVSR 88

Query: 1012 TSAALIVQEDQLPFG-NFHPYMLDLDDTPARS---SCSSDHHPCHQHFLSWQI------- 1158
            T   L  + D+   G N H  +  +   P RS        ++   + F + ++       
Sbjct: 89   TLYLLECEPDKFEIGSNNHVKLAPIFKLPLRSFRDKRDQINNESKRPFRAARLVSGKNDE 148

Query: 1159 ---HGLTQRNVNCCFFKGNATLISSCNGLLCLYSPASGEPLYCICNPISGECMALPPPIS 1329
                G     + C        +++SCNGLLCL  P+ G P+  ICNP++GE + LP   +
Sbjct: 149  NSDRGRQSLYIACNRDIDKFDIVNSCNGLLCLSDPSFGNPI-VICNPVTGEFIRLPESTT 207

Query: 1330 STSGYTYLNHSGFGFCPKTNKYKV----IRFMSFTSSDPFTVSTLRTVALVHTVGTKSWR 1497
            + +       +GFGF PKTN+YKV    IR +   +   F     R +  ++T+GT SWR
Sbjct: 208  NRTRVRMQGQAGFGFQPKTNEYKVISVWIRHVKHANQWVFE----RVILEINTLGTTSWR 263

Query: 1498 NIGNAP-CPETGGSFDSLLCNSLHWITNSRTTSDLISSFDLETEKFRSVPVPAH-FGPEY 1671
            N+   P    +   + + +  +LHWI        ++  F  E E+ +S P P H FG   
Sbjct: 264  NVEVDPQISFSSLKYPTCVNGALHWIRFEGQQRSIL-VFCFENERLQSFPSPPHVFGNHN 322

Query: 1672 VSKISWISVGVLGERLCVCYTLGDAQFEVCVMKEYGVRESWIKEFVIDIKFYCGVQVE-- 1845
            V     IS+G L   L +C     +   + VM EYG+ ESW K + ID  F    +V   
Sbjct: 323  VFCCRPISMGELKGFLYICDPTFISNVSMWVMNEYGIGESWTKIYNIDTSFNPLDRVPRG 382

Query: 1846 -DLQQPIK-FSNNGELLLISRFNFLVSYSPQKGTFRDIKKLGDW--KAEAIAHVPSLISL 2013
              L  PIK F     +L     N    Y P+K  F+  +  G      E I H+PSLISL
Sbjct: 383  YGLSWPIKHFEEGAAILSYHSSNCFTYYEPEKYGFKVFRIHGSRINYFEVIPHIPSLISL 442

Query: 2014 KTAVKGKNLKVEKI 2055
            K  +KG N++V  I
Sbjct: 443  KDVLKGVNIEVLNI 456


Top