BLASTX nr result

ID: Panax21_contig00013855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013855
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632341.1| PREDICTED: methylcrotonoyl-CoA carboxylase s...   130   8e-29
ref|XP_002307604.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002524738.1| acetyl-CoA carboxylase, putative [Ricinus co...   118   4e-25
gb|AAA67356.1| 3-methylcrotonyl-CoA carboxylase precursor [Arabi...   112   3e-23
ref|NP_563674.1| methylcrotonoyl-CoA carboxylase subunit alpha [...   112   3e-23

>ref|XP_003632341.1| PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha,
           mitochondrial-like [Vitis vinifera]
           gi|296085234|emb|CBI28729.3| unnamed protein product
           [Vitis vinifera]
          Length = 735

 Score =  130 bits (328), Expect = 8e-29
 Identities = 67/85 (78%), Positives = 72/85 (84%)
 Frame = -2

Query: 514 EIQQKPTFGTASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAMKMEHVVKAQTG 335
           E Q KP+F   SH PGTVVAPMAGLVVKVLVKDG  VE+GQPILVLEAMKMEHVVKA +G
Sbjct: 648 EAQHKPSFEATSHPPGTVVAPMAGLVVKVLVKDGTNVEEGQPILVLEAMKMEHVVKAPSG 707

Query: 334 GFVSGLKVTAGQQVSDGCALFSVKD 260
           G V GL+VTAGQQVSDG  LFSV+D
Sbjct: 708 GHVHGLQVTAGQQVSDGSFLFSVQD 732


>ref|XP_002307604.1| predicted protein [Populus trichocarpa] gi|222857053|gb|EEE94600.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/84 (79%), Positives = 69/84 (82%)
 Frame = -2

Query: 514 EIQQKPTFGTASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAMKMEHVVKAQTG 335
           EIQQK  F TA H PGTVVAPMAGLVVKVLV DG KVE+GQPILVLEAMKMEHVVKA   
Sbjct: 675 EIQQKTNFETALHPPGTVVAPMAGLVVKVLVMDGTKVEEGQPILVLEAMKMEHVVKAPFS 734

Query: 334 GFVSGLKVTAGQQVSDGCALFSVK 263
           G V GL+VTAGQQVSD   LFSVK
Sbjct: 735 GHVHGLQVTAGQQVSDSSPLFSVK 758


>ref|XP_002524738.1| acetyl-CoA carboxylase, putative [Ricinus communis]
           gi|223535922|gb|EEF37581.1| acetyl-CoA carboxylase,
           putative [Ricinus communis]
          Length = 742

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/75 (80%), Positives = 66/75 (88%)
 Frame = -2

Query: 487 TASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAMKMEHVVKAQTGGFVSGLKVT 308
           TASH PGTVVAPMAGLVVKVLV+DG KVE+GQPILVLEAMKMEHVVKA   G+V GL+VT
Sbjct: 666 TASHPPGTVVAPMAGLVVKVLVQDGSKVEEGQPILVLEAMKMEHVVKAPFTGYVRGLQVT 725

Query: 307 AGQQVSDGCALFSVK 263
           AGQQ+SD   LFS+K
Sbjct: 726 AGQQISDNSLLFSIK 740


>gb|AAA67356.1| 3-methylcrotonyl-CoA carboxylase precursor [Arabidopsis thaliana]
          Length = 715

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/83 (67%), Positives = 68/83 (81%)
 Frame = -2

Query: 511 IQQKPTFGTASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAMKMEHVVKAQTGG 332
           +Q + +  T+SH PGT+VAPMAGLVVKVLV++  KV++GQPILVLEAMKMEHVVKA + G
Sbjct: 632 VQHRTSSETSSHPPGTIVAPMAGLVVKVLVENEAKVDQGQPILVLEAMKMEHVVKAPSSG 691

Query: 331 FVSGLKVTAGQQVSDGCALFSVK 263
            +  LKV AGQQVSDG ALF +K
Sbjct: 692 SIQDLKVKAGQQVSDGSALFRIK 714


>ref|NP_563674.1| methylcrotonoyl-CoA carboxylase subunit alpha [Arabidopsis
           thaliana] gi|332189407|gb|AEE27528.1|
           methylcrotonoyl-CoA carboxylase subunit alpha
           [Arabidopsis thaliana]
          Length = 714

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/83 (67%), Positives = 68/83 (81%)
 Frame = -2

Query: 511 IQQKPTFGTASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAMKMEHVVKAQTGG 332
           +Q + +  T+SH PGT+VAPMAGLVVKVLV++  KV++GQPILVLEAMKMEHVVKA + G
Sbjct: 631 VQHRTSSETSSHPPGTIVAPMAGLVVKVLVENEAKVDQGQPILVLEAMKMEHVVKAPSSG 690

Query: 331 FVSGLKVTAGQQVSDGCALFSVK 263
            +  LKV AGQQVSDG ALF +K
Sbjct: 691 SIQDLKVKAGQQVSDGSALFRIK 713