BLASTX nr result

ID: Panax21_contig00013587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013587
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90603.1| 40S ribosomal protein S5 [Solanum tuberosum]            95   5e-18
gb|AAR89617.1| 40S ribosomal protein S5 [Capsicum annuum]              92   3e-17
gb|AFK39266.1| unknown [Lotus japonicus]                               76   2e-12
ref|XP_003533901.1| PREDICTED: 40S ribosomal protein S5-like [Gl...    75   4e-12
gb|ACU20529.1| unknown [Glycine max]                                   75   4e-12

>gb|AFW90603.1| 40S ribosomal protein S5 [Solanum tuberosum]
          Length = 219

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/62 (67%), Positives = 49/62 (79%)
 Frame = +3

Query: 222 AAVEGIEKPSKEPAHSDVMLFNRWSYDEVQVGDLSVEDYITATASKHPTYMPHTAGRYQA 401
           AA    +   +   H+DVMLFNRWSYD V++ D+SVEDYITATA+KHP YMPHTAGRYQA
Sbjct: 14  AAAAATDASKENKIHTDVMLFNRWSYDGVEINDMSVEDYITATANKHPVYMPHTAGRYQA 73

Query: 402 KR 407
           KR
Sbjct: 74  KR 75


>gb|AAR89617.1| 40S ribosomal protein S5 [Capsicum annuum]
          Length = 212

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = +3

Query: 264 HSDVMLFNRWSYDEVQVGDLSVEDYITATASKHPTYMPHTAGRYQAKR 407
           H+DVMLFNRWSYD V + D+SVEDYITATA+KHP YMPHTAGRYQAKR
Sbjct: 21  HTDVMLFNRWSYDGVDINDMSVEDYITATANKHPVYMPHTAGRYQAKR 68


>gb|AFK39266.1| unknown [Lotus japonicus]
          Length = 204

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 32/51 (62%), Positives = 40/51 (78%)
 Frame = +3

Query: 255 EPAHSDVMLFNRWSYDEVQVGDLSVEDYITATASKHPTYMPHTAGRYQAKR 407
           +P+  +V LFNRWSYD+VQV D+S+ DY+   ASKH TY+PHTAGRY  KR
Sbjct: 10  DPSQIEVKLFNRWSYDDVQVTDISLADYVGVVASKHATYVPHTAGRYSVKR 60


>ref|XP_003533901.1| PREDICTED: 40S ribosomal protein S5-like [Glycine max]
          Length = 204

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +3

Query: 237 IEKPSKEPAHSDVMLFNRWSYDEVQVGDLSVEDYITATASKHPTYMPHTAGRYQAKR 407
           IE    +P+  DV LFNRWS+D+V+V D+S+ DYI  + SKH TY+PHTAGRY  KR
Sbjct: 4   IEATVPDPSQIDVKLFNRWSFDDVEVTDMSLADYIGVSPSKHATYVPHTAGRYSVKR 60


>gb|ACU20529.1| unknown [Glycine max]
          Length = 201

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +3

Query: 237 IEKPSKEPAHSDVMLFNRWSYDEVQVGDLSVEDYITATASKHPTYMPHTAGRYQAKR 407
           IE    +P+  DV LFNRWS+D+V+V D+S+ DYI  + SKH TY+PHTAGRY  KR
Sbjct: 4   IEATVPDPSQIDVKLFNRWSFDDVEVTDMSLADYIGVSPSKHATYVPHTAGRYSVKR 60


Top