BLASTX nr result

ID: Panax21_contig00013546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013546
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   144   1e-32
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              144   1e-32
gb|AFW73577.1| hypothetical protein ZEAMMB73_198499 [Zea mays]        142   2e-32
sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombinati...   142   4e-32
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...   138   5e-31

>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 934

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/83 (86%), Positives = 76/83 (91%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3   WNPANDKQAATRVWRDEQKKRVYIYQLLSTGTIEEKVYQRQMSKEGL*KVIQKEQTDS-K 179
           WNPANDKQAA RVWRD QKKRVYIY+ LSTGTIEEKV+QRQMSKEGL KVIQ+EQ DS K
Sbjct: 635 WNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDSLK 694

Query: 180 NQGNFLSTEDLRDLFTFHENVRS 248
            QGNFLSTEDLRDLF+FHENVRS
Sbjct: 695 TQGNFLSTEDLRDLFSFHENVRS 717


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/83 (86%), Positives = 76/83 (91%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3    WNPANDKQAATRVWRDEQKKRVYIYQLLSTGTIEEKVYQRQMSKEGL*KVIQKEQTDS-K 179
            WNPANDKQAA RVWRD QKKRVYIY+ LSTGTIEEKV+QRQMSKEGL KVIQ+EQ DS K
Sbjct: 813  WNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDSLK 872

Query: 180  NQGNFLSTEDLRDLFTFHENVRS 248
             QGNFLSTEDLRDLF+FHENVRS
Sbjct: 873  TQGNFLSTEDLRDLFSFHENVRS 895


>gb|AFW73577.1| hypothetical protein ZEAMMB73_198499 [Zea mays]
          Length = 392

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/82 (85%), Positives = 74/82 (90%)
 Frame = +3

Query: 3   WNPANDKQAATRVWRDEQKKRVYIYQLLSTGTIEEKVYQRQMSKEGL*KVIQKEQTDSKN 182
           WNPANDKQAA RVWRD QKKRVYIY+ LSTGTIEEKVYQRQMSKEGL KVIQ+EQ D+K 
Sbjct: 106 WNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQADNKM 165

Query: 183 QGNFLSTEDLRDLFTFHENVRS 248
           QGN LSTEDLRDLF FHE+VRS
Sbjct: 166 QGNSLSTEDLRDLFIFHEHVRS 187


>sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
           Short=OsRad54 gi|144369229|dbj|BAF56217.1| OsRad54
           [Oryza sativa Japonica Group]
          Length = 980

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/82 (84%), Positives = 73/82 (89%)
 Frame = +3

Query: 3   WNPANDKQAATRVWRDEQKKRVYIYQLLSTGTIEEKVYQRQMSKEGL*KVIQKEQTDSKN 182
           WNPANDKQAA RVWRD QKKRVYIY+ LSTGTIEEKVYQRQMSKEGL KVIQ+EQ D K 
Sbjct: 688 WNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQADGKM 747

Query: 183 QGNFLSTEDLRDLFTFHENVRS 248
           QG+ LSTEDLRDLFTFHE +RS
Sbjct: 748 QGSSLSTEDLRDLFTFHEQIRS 769


>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
           max]
          Length = 894

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/83 (83%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3   WNPANDKQAATRVWRDEQKKRVYIYQLLSTGTIEEKVYQRQMSKEGL*KVIQKEQTDS-K 179
           WNPANDKQAA RVWRD QKKRVYIY+ LS GTIEEKVYQRQMSKEGL KVIQ+EQTDS  
Sbjct: 625 WNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQQEQTDSLV 684

Query: 180 NQGNFLSTEDLRDLFTFHENVRS 248
            QGN LSTE+LRDLFTFHEN++S
Sbjct: 685 AQGNLLSTENLRDLFTFHENIKS 707


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