BLASTX nr result

ID: Panax21_contig00013454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013454
         (1397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15459.3| unnamed protein product [Vitis vinifera]              447   e-123
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   446   e-123
ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117
ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron sp...   421   e-115
ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron sp...   410   e-112

>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  447 bits (1151), Expect = e-123
 Identities = 242/374 (64%), Positives = 272/374 (72%), Gaps = 2/374 (0%)
 Frame = -1

Query: 1397 QNTNNLLMAEEIKKLTGGVLLLRNKYYIVIYRGKDFVPKSVAVALAERQEVAKEIQDXXX 1218
            QNTNN LMAEEIK LTGGVLLLRNKYYIVIYRGKDF+P SVA A                
Sbjct: 465  QNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAA---------------- 508

Query: 1217 XXXXXXXEAASVNGXXXXXXXXXXXXXXXEAASVNGLAESQEPSKQIPDVEDKVRTGAAE 1038
                                                L+E +E +K I  VE+KVRTG AE
Sbjct: 509  ------------------------------------LSEREELTKHIQVVEEKVRTGGAE 532

Query: 1037 TAPLGEQG--QALAGTLAEFYEAQAQWGREISAEEQEKMIEELSRSKTNRVVKRLEHKLF 864
              P GE G  Q LAGTLAEFYEAQA+WGREISAEE EKMIEE SR+K+ RVVKR+EHKL 
Sbjct: 533  AIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLA 592

Query: 863  IAQAKNAKAEKELVKIRESWLPVGPPDDQETITDEERVMFRRVGLRMKPYLPLGIRGVFD 684
            +AQAK  +AE+ L KI  S +P GP DDQETITDEER MFRR+GLRMK YL LG+RGVFD
Sbjct: 593  LAQAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFD 652

Query: 683  GVIENMHLHWKHRELVKLISKQKDLAFVEETTRLLEYESGGILVDIVRVPKGYAVIYYRG 504
            GVIENMHLHWKHRELVKLISKQK LAFVE+T RLLEYESGGILV I RVPKGYA+IYYRG
Sbjct: 653  GVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRG 712

Query: 503  KNYRRPISLRPRNLPTKARALKRWRALQRYEALSQHISELEKAVEQMKSQNDDSKDAEDD 324
            KNYRRP+SLRPRNL TKA+ALKR  A+QR+EALSQHISELE+ +EQMK +  DSKDAED 
Sbjct: 713  KNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGDSKDAEDK 772

Query: 323  KTRNSDEHSQYDHI 282
             + +++ H Q+D +
Sbjct: 773  DSWSTEGHGQFDQV 786


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  446 bits (1146), Expect = e-123
 Identities = 241/374 (64%), Positives = 271/374 (72%), Gaps = 2/374 (0%)
 Frame = -1

Query: 1397 QNTNNLLMAEEIKKLTGGVLLLRNKYYIVIYRGKDFVPKSVAVALAERQEVAKEIQDXXX 1218
            QNTNN LMAEEIK LTGGVLLLRNKYYIVIYRGKDF+P SVA A                
Sbjct: 465  QNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAA---------------- 508

Query: 1217 XXXXXXXEAASVNGXXXXXXXXXXXXXXXEAASVNGLAESQEPSKQIPDVEDKVRTGAAE 1038
                                                L+E +E +K I  VE+KVRTG AE
Sbjct: 509  ------------------------------------LSEREELTKHIQVVEEKVRTGGAE 532

Query: 1037 TAPLGEQG--QALAGTLAEFYEAQAQWGREISAEEQEKMIEELSRSKTNRVVKRLEHKLF 864
              P GE G  Q LAGTLAEFYEAQA+WGREISAEE EKMIEE SR+K+ RVVKR+EHKL 
Sbjct: 533  AIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLA 592

Query: 863  IAQAKNAKAEKELVKIRESWLPVGPPDDQETITDEERVMFRRVGLRMKPYLPLGIRGVFD 684
            +AQAK  + E+ L KI  S +P GP DDQETITDEER MFRR+GLRMK YL LG+RGVFD
Sbjct: 593  LAQAKKLRPERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFD 652

Query: 683  GVIENMHLHWKHRELVKLISKQKDLAFVEETTRLLEYESGGILVDIVRVPKGYAVIYYRG 504
            GVIENMHLHWKHRELVKLISKQK LAFVE+T RLLEYESGGILV I RVPKGYA+IYYRG
Sbjct: 653  GVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRG 712

Query: 503  KNYRRPISLRPRNLPTKARALKRWRALQRYEALSQHISELEKAVEQMKSQNDDSKDAEDD 324
            KNYRRP+SLRPRNL TKA+ALKR  A+QR+EALSQHISELE+ +EQMK +  DSKDAED 
Sbjct: 713  KNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGDSKDAEDK 772

Query: 323  KTRNSDEHSQYDHI 282
             + +++ H Q+D +
Sbjct: 773  DSWSTEGHGQFDQV 786


>ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|222858586|gb|EEE96133.1|
            predicted protein [Populus trichocarpa]
          Length = 806

 Score =  426 bits (1094), Expect = e-117
 Identities = 229/373 (61%), Positives = 273/373 (73%), Gaps = 1/373 (0%)
 Frame = -1

Query: 1397 QNTNNLLMAEEIKKLTGGVLLLRNKYYIVIYRGKDFVPKSVAVALAERQEVAKEIQDXXX 1218
            QNTNN LMA+E+K LTGGVLLLRNKYYIVI+RGKDF+P+SVA A                
Sbjct: 453  QNTNNKLMADELKMLTGGVLLLRNKYYIVIFRGKDFLPQSVAAA---------------- 496

Query: 1217 XXXXXXXEAASVNGXXXXXXXXXXXXXXXEAASVNGLAESQEPSKQIPDVEDKVRTGAAE 1038
                                                LAE QE +KQI DVE++VR+ + E
Sbjct: 497  ------------------------------------LAERQEVTKQIQDVEERVRSNSVE 520

Query: 1037 TAPLGE-QGQALAGTLAEFYEAQAQWGREISAEEQEKMIEELSRSKTNRVVKRLEHKLFI 861
             AP GE +G+ALAGTLAEFYEAQA+WGR+IS EE+EKMIEE S++KT R+VKR EHKL I
Sbjct: 521  AAPSGEDEGKALAGTLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAI 580

Query: 860  AQAKNAKAEKELVKIRESWLPVGPPDDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDG 681
            AQAK  +AE  L KI  + +P GP  DQETI++EERVMFRRVGLRMK YLPLGIRGVFDG
Sbjct: 581  AQAKKLRAESLLSKIETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDG 640

Query: 680  VIENMHLHWKHRELVKLISKQKDLAFVEETTRLLEYESGGILVDIVRVPKGYAVIYYRGK 501
            VIENMHLHWKHRELVKLISKQK LAFVE+T +LLEYESGG+LV I RVPKG+A+IYYRGK
Sbjct: 641  VIENMHLHWKHRELVKLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKGFALIYYRGK 700

Query: 500  NYRRPISLRPRNLPTKARALKRWRALQRYEALSQHISELEKAVEQMKSQNDDSKDAEDDK 321
            NYRRPIS+RPRNL TKA+ALKR  A+QR+EALSQHI ELEK +E+M  +   SK+ E++ 
Sbjct: 701  NYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIFELEKNIEEMVKEMGLSKEEENEN 760

Query: 320  TRNSDEHSQYDHI 282
              +S+EH+  +++
Sbjct: 761  NWSSEEHAPLNNV 773


>ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
            gi|449477054|ref|XP_004154915.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 560

 Score =  421 bits (1083), Expect = e-115
 Identities = 228/365 (62%), Positives = 262/365 (71%)
 Frame = -1

Query: 1397 QNTNNLLMAEEIKKLTGGVLLLRNKYYIVIYRGKDFVPKSVAVALAERQEVAKEIQDXXX 1218
            QNTNN LMAEEI  LTGGVLLLRNKY+IVIYRGKDF+P SVAVA                
Sbjct: 194  QNTNNKLMAEEIGNLTGGVLLLRNKYFIVIYRGKDFLPPSVAVA---------------- 237

Query: 1217 XXXXXXXEAASVNGXXXXXXXXXXXXXXXEAASVNGLAESQEPSKQIPDVEDKVRTGAAE 1038
                                                L E QE +KQI DVE+KVR    E
Sbjct: 238  ------------------------------------LTERQELTKQIQDVEEKVRNKVVE 261

Query: 1037 TAPLGEQGQALAGTLAEFYEAQAQWGREISAEEQEKMIEELSRSKTNRVVKRLEHKLFIA 858
               L   GQA AGTLAEFYEAQ++WGREI+AEE+EKM+EE SR+KT R+V+R+EHKL +A
Sbjct: 262  ATSLSINGQAPAGTLAEFYEAQSRWGREITAEEREKMVEESSRAKTARLVRRIEHKLGVA 321

Query: 857  QAKNAKAEKELVKIRESWLPVGPPDDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDGV 678
            QAK  +AEK L KI  S +   P DDQETITDEERVMFRRVGLRM  YLP+GIRGVFDGV
Sbjct: 322  QAKKLRAEKLLSKIEASMILSSPDDDQETITDEERVMFRRVGLRMTAYLPMGIRGVFDGV 381

Query: 677  IENMHLHWKHRELVKLISKQKDLAFVEETTRLLEYESGGILVDIVRVPKGYAVIYYRGKN 498
            +ENMHLHWKHRELVKLISKQK LAFVEET RLLEYESGGILV I RVPKGYA++YYRGKN
Sbjct: 382  VENMHLHWKHRELVKLISKQKTLAFVEETARLLEYESGGILVSIDRVPKGYALVYYRGKN 441

Query: 497  YRRPISLRPRNLPTKARALKRWRALQRYEALSQHISELEKAVEQMKSQNDDSKDAEDDKT 318
            YRRPI+LRPRNL TKA+ALKR  A+QR+EALSQHISELE+ +EQMK +   ++D++D+  
Sbjct: 442  YRRPIALRPRNLLTKAKALKRSVAMQRHEALSQHISELEQNIEQMKKEIGVTEDSDDENK 501

Query: 317  RNSDE 303
             +S +
Sbjct: 502  LSSQD 506


>ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 791

 Score =  410 bits (1055), Expect = e-112
 Identities = 220/373 (58%), Positives = 262/373 (70%), Gaps = 3/373 (0%)
 Frame = -1

Query: 1397 QNTNNLLMAEEIKKLTGGVLLLRNKYYIVIYRGKDFVPKSVAVALAERQEVAKEIQDXXX 1218
            QNTNN LMAEE+K LTGG LLLRNKY+IVIYRGKDFVP SVA                  
Sbjct: 431  QNTNNELMAEELKMLTGGTLLLRNKYFIVIYRGKDFVPTSVAAV---------------- 474

Query: 1217 XXXXXXXEAASVNGXXXXXXXXXXXXXXXEAASVNGLAESQEPSKQIPDVEDKVRTGAAE 1038
                                                LAE +E +KQ+ DVEDKVR  A +
Sbjct: 475  ------------------------------------LAEREELTKQVQDVEDKVRCRAVD 498

Query: 1037 TAPLGE-QGQALAGTLAEFYEAQAQWGREISAEEQEKMIEELSRSKTNRVVKRLEHKLFI 861
              P G+ +  A AGTLAEFYEAQA+WGREIS +E+EKM+EE +++KT ++V+++EHK+FI
Sbjct: 499  AIPSGQGEATAQAGTLAEFYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFI 558

Query: 860  AQAKNAKAEKELVKIRESWLPVGPPDDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDG 681
            AQ K  +AEK L KI  S +P GP  DQETITDEERVMFR+VGLRMKPYLPLGIRGVFDG
Sbjct: 559  AQTKKLRAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDG 618

Query: 680  VIENMHLHWKHRELVKLISKQKDLAFVEETTRLLEYESGGILVDIVRVPKGYAVIYYRGK 501
            V+ENMHLHWKHRELVKL++KQK LAFVE+T RLLEYESGGILV I +V K +A+IYYRGK
Sbjct: 619  VVENMHLHWKHRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGK 678

Query: 500  NYRRPISLRPRNLPTKARALKRWRALQRYEALSQHISELEKAVEQMKSQ--NDDSKDAED 327
            NY+RPI+LRPRNL TK +ALKR  A+QR+EALSQHI+ELEK +EQMK +       D ED
Sbjct: 679  NYKRPITLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKELGMTQDSDVED 738

Query: 326  DKTRNSDEHSQYD 288
              +   D+H+Q D
Sbjct: 739  GGSIEEDDHNQID 751


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