BLASTX nr result
ID: Panax21_contig00013181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00013181
(1365 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-li... 644 0.0
ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Rici... 626 e-177
ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) syntha... 616 e-174
ref|XP_002865017.1| nitrogen regulation family protein [Arabidop... 579 e-163
ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis tha... 578 e-162
>ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-like [Vitis vinifera]
Length = 424
Score = 644 bits (1660), Expect = 0.0
Identities = 314/408 (76%), Positives = 358/408 (87%), Gaps = 8/408 (1%)
Frame = -3
Query: 1354 SVSPINDSPFFMAQTVTQTVTLS--------ENLDDGDHLCSVNPQFLPENYEKQQNSSL 1199
S+ ++ S + MA ++++T+TL+ NLDD H+CS E E Q+ S
Sbjct: 14 SLKHLSRSIYTMASSISETLTLTLPAGSPQDSNLDD--HICS-------EQQEHQECQSS 64
Query: 1198 GSPIPNGCLSGESRIERAWAHWKKLGEPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPML 1019
+ P+ CL+GESRIERAWAHWKKLG+PKLIVAPMVDNSELPFR+LCRKYGA+AAYTPML
Sbjct: 65 SADWPSRCLTGESRIERAWAHWKKLGQPKLIVAPMVDNSELPFRMLCRKYGAQAAYTPML 124
Query: 1018 HSRIFTENEKYRSLEFTTCKEDRPLFVQFCANDPDTLLEAAQRVVPYCDYVDINLGCPQR 839
HSRIF+ENEKYRS EFTTCKEDRPLFVQFCANDPDTLLEAAQRV PYCDYVDINLGCPQR
Sbjct: 125 HSRIFSENEKYRSQEFTTCKEDRPLFVQFCANDPDTLLEAAQRVEPYCDYVDINLGCPQR 184
Query: 838 IARRGNYGAFLMNNLPLVKSLVEKLALNLNVPVSCKIRVFPDLQDTLNYAKMLEDAGCSL 659
IARRGNYGAFLM+NLPLVKSLVEKLALNL+VPVSCKIRVFP+LQDT+NYA+MLEDAGCSL
Sbjct: 185 IARRGNYGAFLMDNLPLVKSLVEKLALNLHVPVSCKIRVFPNLQDTINYARMLEDAGCSL 244
Query: 658 LAVHGRTRDEKDGKRIRANWNAIRAVKNAVRIPVLANGNVRHMDDVQICLKETGADGVLS 479
LAVHGRTRDEKDGK+ RA+WNAI+AVKNAV IPVLANG++RHMDDVQ CL+ETGADGVLS
Sbjct: 245 LAVHGRTRDEKDGKKFRADWNAIKAVKNAVSIPVLANGDIRHMDDVQRCLEETGADGVLS 304
Query: 478 AESLLENPALFAGFRTAEWVLSGEDSNEEGALDQADLLVEYLKLCEKYPVAWRMIRAHVH 299
AESLLENPALFAGF+TAEW L GE+ N++G LDQA+LLVEYLKLCEKYPV WRMIR+HVH
Sbjct: 305 AESLLENPALFAGFQTAEWALGGEEGNKDGELDQANLLVEYLKLCEKYPVPWRMIRSHVH 364
Query: 298 KMLGEWFRIHPHIREDFNAQSKLTFEFLYDMVSRLRDLGVKKPLYVKD 155
K+LGEWFRI P +R+D N+QSKLTFEFLY+MV +LR+LGV+ PLY KD
Sbjct: 365 KLLGEWFRIQPQVRDDLNSQSKLTFEFLYNMVDQLRELGVRIPLYTKD 412
>ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
gi|223526922|gb|EEF29128.1| tRNA-dihydrouridine synthase,
putative [Ricinus communis]
Length = 426
Score = 626 bits (1615), Expect = e-177
Identities = 302/396 (76%), Positives = 349/396 (88%), Gaps = 6/396 (1%)
Frame = -3
Query: 1321 MAQTVTQTVTLSENLDDGDHLCSVNPQ------FLPENYEKQQNSSLGSPIPNGCLSGES 1160
MA ++T+TV + ++ DD + LCS Q LP+ +S LGS P+ L+GES
Sbjct: 20 MASSLTRTVAIDQDNDDDEVLCSSAHQEHTSFSTLPDTVS---SSCLGSATPSCYLNGES 76
Query: 1159 RIERAWAHWKKLGEPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRS 980
R++RAWAHW K+G+PKL+VAPMVDNSELPFR+LCRKYGA+AAYTPMLHSRIFTENEKYR+
Sbjct: 77 RVDRAWAHWNKIGKPKLLVAPMVDNSELPFRMLCRKYGADAAYTPMLHSRIFTENEKYRT 136
Query: 979 LEFTTCKEDRPLFVQFCANDPDTLLEAAQRVVPYCDYVDINLGCPQRIARRGNYGAFLMN 800
EFTTC EDRPLFVQFCANDPD LLEAA++V PYCDYVDINLGCPQRIARRGNYGAFLM+
Sbjct: 137 QEFTTCNEDRPLFVQFCANDPDILLEAARKVEPYCDYVDINLGCPQRIARRGNYGAFLMD 196
Query: 799 NLPLVKSLVEKLALNLNVPVSCKIRVFPDLQDTLNYAKMLEDAGCSLLAVHGRTRDEKDG 620
NLPLVKSLVEKLALNLNVPVSCKIR+FP L DT++YA+MLE+AGCSLLAVHGRTRDEKDG
Sbjct: 197 NLPLVKSLVEKLALNLNVPVSCKIRLFPKLDDTISYARMLEEAGCSLLAVHGRTRDEKDG 256
Query: 619 KRIRANWNAIRAVKNAVRIPVLANGNVRHMDDVQICLKETGADGVLSAESLLENPALFAG 440
K+ RA+W AI+AV+NAV+IP+LANGNVRHMDDV+ CL+ETGADGVLSAESLLENPALFAG
Sbjct: 257 KKFRADWKAIKAVRNAVKIPLLANGNVRHMDDVRNCLEETGADGVLSAESLLENPALFAG 316
Query: 439 FRTAEWVLSGEDSNEEGALDQADLLVEYLKLCEKYPVAWRMIRAHVHKMLGEWFRIHPHI 260
FRTAEWV+ E+S +G LDQADLLVEYLKLCE+YPV WRMIRAHVHKMLG+WFRIHPH+
Sbjct: 317 FRTAEWVVGDEESTRDGKLDQADLLVEYLKLCEEYPVPWRMIRAHVHKMLGDWFRIHPHV 376
Query: 259 REDFNAQSKLTFEFLYDMVSRLRDLGVKKPLYVKDL 152
RE+ NAQS+LTFEFLY++V +LR LGV+ PLYVKDL
Sbjct: 377 REELNAQSRLTFEFLYNVVDQLRALGVRIPLYVKDL 412
>ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
[Cucumis sativus] gi|449484028|ref|XP_004156763.1|
PREDICTED: tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like [Cucumis sativus]
Length = 426
Score = 616 bits (1588), Expect = e-174
Identities = 305/399 (76%), Positives = 343/399 (85%), Gaps = 10/399 (2%)
Frame = -3
Query: 1321 MAQTVTQTVT---LSENLDDGDHLCSVN---PQF----LPENYEKQQNSSLGSPIPNGCL 1172
MA ++ QT+ ++LDD LCS + PQ L + LGSP G L
Sbjct: 22 MASSLIQTLKPDLAPQDLDD--LLCSPSHKQPQHESSSLTNSTSNDSTPLLGSP--TGYL 77
Query: 1171 SGESRIERAWAHWKKLGEPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENE 992
S ESRIERAWAHW KLG PKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENE
Sbjct: 78 SRESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENE 137
Query: 991 KYRSLEFTTCKEDRPLFVQFCANDPDTLLEAAQRVVPYCDYVDINLGCPQRIARRGNYGA 812
KYR++EFTTC+EDRPLFVQFCANDPD LLEAA+RV PYCDYVD+NLGCPQRIARRGNYGA
Sbjct: 138 KYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGA 197
Query: 811 FLMNNLPLVKSLVEKLALNLNVPVSCKIRVFPDLQDTLNYAKMLEDAGCSLLAVHGRTRD 632
FLM+NLPLVK++VEKLA NL VPVSCKIR+FP+LQDT+NYA+MLEDAGCSLLAVHGRTRD
Sbjct: 198 FLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRD 257
Query: 631 EKDGKRIRANWNAIRAVKNAVRIPVLANGNVRHMDDVQICLKETGADGVLSAESLLENPA 452
EKDGK+ RANW+AI AVKNAVRIPVLANGN+RHM+DV CL+ETG +GVLSAE+LLENPA
Sbjct: 258 EKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNDCLQETGVEGVLSAETLLENPA 317
Query: 451 LFAGFRTAEWVLSGEDSNEEGALDQADLLVEYLKLCEKYPVAWRMIRAHVHKMLGEWFRI 272
LFAGFRTAEW+ E++ +G LDQADLLV+YLKLCEKYPV WRMIR+HVHK+LG+WF+I
Sbjct: 318 LFAGFRTAEWIEGHEENTRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKI 377
Query: 271 HPHIREDFNAQSKLTFEFLYDMVSRLRDLGVKKPLYVKD 155
HPHIREDFNAQSKLTFEFLY+MV RLR+L VK PLY+KD
Sbjct: 378 HPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKD 416
>ref|XP_002865017.1| nitrogen regulation family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310852|gb|EFH41276.1| nitrogen regulation family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 423
Score = 579 bits (1493), Expect = e-163
Identities = 288/393 (73%), Positives = 327/393 (83%), Gaps = 9/393 (2%)
Frame = -3
Query: 1309 VTQTVTLSENLDD--------GDHLCSVNPQFLPENYEKQQNSSLGSPIPNGCLSGESRI 1154
++QT +++N D D LCS E +SLGSP + LS ++R+
Sbjct: 18 ISQTRAMTQNPDPKPDPSKVIDDLLCSEQRDGQIEETVDAVAASLGSP--SRVLSIDTRV 75
Query: 1153 ERAWAHWKKLGEPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRSLE 974
ERAWAHWKKLG PK IVAPMVDNSELPFRLLC+KYGA+AAYTPMLHSRIFTE EKYR+ E
Sbjct: 76 ERAWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQE 135
Query: 973 FTTCKEDRPLFVQFCANDPDTLLEAAQRVVPYCDYVDINLGCPQRIARRGNYGAFLMNNL 794
FTTCKEDRPLFVQFCANDPDTLLEAA+RV PYCDYVDINLGCPQRIARRGNYGAFLM+NL
Sbjct: 136 FTTCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNL 195
Query: 793 PLVKSLVEKLALNLNVPVSCKIRVFPDLQDTLNYAKMLEDAGCSLLAVHGRTRDEKDGKR 614
PLVKSLVEKLA NLNVPVSCKIR+FP+LQDTL YAKMLEDAGCSLLAVHGRTRDEKDGK+
Sbjct: 196 PLVKSLVEKLAQNLNVPVSCKIRIFPNLQDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKK 255
Query: 613 IRANWNAIRAVKNAVRIPVLANGNVRHMDDVQICLKETGADGVLSAESLLENPALFAGFR 434
+RA+W+AI+ VKNA+RIPVL NGNVR ++DV C+KETG +GVLSAE+LLENPA FAGFR
Sbjct: 256 LRADWSAIKEVKNALRIPVLGNGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFR 315
Query: 433 TAEWVLSGEDSN-EEGALDQADLLVEYLKLCEKYPVAWRMIRAHVHKMLGEWFRIHPHIR 257
TAEWV E+ +G LDQ DL+VEYLKLCEK+PV WRMIR+HVHKMLGEWFRIHP +R
Sbjct: 316 TAEWVSENEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFRIHPQVR 375
Query: 256 EDFNAQSKLTFEFLYDMVSRLRDLGVKKPLYVK 158
E NAQ+ LTFEFLY +V +LR+LG + PLY K
Sbjct: 376 EQLNAQNILTFEFLYGLVDQLRELGGRVPLYKK 408
>ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
gi|10177609|dbj|BAB10956.1| unnamed protein product
[Arabidopsis thaliana] gi|15146316|gb|AAK83641.1|
AT5g67220/K21H1_18 [Arabidopsis thaliana]
gi|20908082|gb|AAM26724.1| AT5g67220/K21H1_18
[Arabidopsis thaliana] gi|332010932|gb|AED98315.1|
tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
Length = 423
Score = 578 bits (1489), Expect = e-162
Identities = 287/393 (73%), Positives = 326/393 (82%), Gaps = 9/393 (2%)
Frame = -3
Query: 1309 VTQTVTLSENLDD--------GDHLCSVNPQFLPENYEKQQNSSLGSPIPNGCLSGESRI 1154
++QT +++N D D LCS E +SLGSP + LS ++R+
Sbjct: 18 ISQTRAMTQNPDPKPDPSQVLDDILCSEQRDGQIEETVDTAPASLGSP--SRVLSIDTRV 75
Query: 1153 ERAWAHWKKLGEPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRSLE 974
ERAWAHWKKLG PK IVAPMVDNSELPFRLLC+KYGA+AAYTPMLHSRIFTE EKYR+ E
Sbjct: 76 ERAWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQE 135
Query: 973 FTTCKEDRPLFVQFCANDPDTLLEAAQRVVPYCDYVDINLGCPQRIARRGNYGAFLMNNL 794
FTTCKEDRPLFVQFCANDPDTLLEAA+RV PYCDYVDINLGCPQRIARRGNYGAFLM+NL
Sbjct: 136 FTTCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNL 195
Query: 793 PLVKSLVEKLALNLNVPVSCKIRVFPDLQDTLNYAKMLEDAGCSLLAVHGRTRDEKDGKR 614
PLVKSLVEKLA NLNVPVSCKIR+FP+L+DTL YAKMLEDAGCSLLAVHGRTRDEKDGK+
Sbjct: 196 PLVKSLVEKLAQNLNVPVSCKIRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKK 255
Query: 613 IRANWNAIRAVKNAVRIPVLANGNVRHMDDVQICLKETGADGVLSAESLLENPALFAGFR 434
RA+W+AI+ VKNA+RIPVLANGNVR ++DV C+KETG +GVLSAE+LLENPA FAGFR
Sbjct: 256 FRADWSAIKEVKNAMRIPVLANGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFR 315
Query: 433 TAEWVLSGEDSN-EEGALDQADLLVEYLKLCEKYPVAWRMIRAHVHKMLGEWFRIHPHIR 257
TAEW E+ +G LDQ DL+VEYLKLCEK+PV WRMIR+HVHKMLGEWFRIHP +R
Sbjct: 316 TAEWAKDNEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFRIHPQVR 375
Query: 256 EDFNAQSKLTFEFLYDMVSRLRDLGVKKPLYVK 158
E NAQ+ LTFEFLY +V +LR+LG + PLY K
Sbjct: 376 EQLNAQNILTFEFLYGLVDQLRELGGRVPLYKK 408