BLASTX nr result

ID: Panax21_contig00013162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013162
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation prot...    86   3e-15
emb|CBI37983.3| unnamed protein product [Vitis vinifera]               86   3e-15
gb|ABB29959.1| ubiquitin fusion-degradation protein-like [Solanu...    82   4e-14
emb|CAN70718.1| hypothetical protein VITISV_024234 [Vitis vinifera]    79   5e-13
gb|ACF06576.1| ubiquitin fusion degradation protein [Elaeis guin...    76   3e-12

>ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
           vinifera]
          Length = 319

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 58/128 (45%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
 Frame = -1

Query: 521 KPVASVPSSKAPAEGQEATAEAEPKFNPFTGAGRRLDGKPLKYE---XXXXXXXXXXXXS 351
           KPVA VP  KA AE QEA  E EPKFNPF G GRRLDGKP KYE               +
Sbjct: 192 KPVAPVPLGKAAAEVQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKQPVN 251

Query: 350 NGKXXXXXXXXXXXXXXXXXGKLVFGSNVNRT---ISXXXXXXXXXXXXXXXEPKFQAFS 180
            G                  GKLVFGSNVNR+                    EPKFQ FS
Sbjct: 252 RGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPKKEEPKFQPFS 311

Query: 179 GKRYLLKG 156
           GK+Y LKG
Sbjct: 312 GKKYSLKG 319


>emb|CBI37983.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 58/128 (45%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
 Frame = -1

Query: 521 KPVASVPSSKAPAEGQEATAEAEPKFNPFTGAGRRLDGKPLKYE---XXXXXXXXXXXXS 351
           KPVA VP  KA AE QEA  E EPKFNPF G GRRLDGKP KYE               +
Sbjct: 182 KPVAPVPLGKAAAEVQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKQPVN 241

Query: 350 NGKXXXXXXXXXXXXXXXXXGKLVFGSNVNRT---ISXXXXXXXXXXXXXXXEPKFQAFS 180
            G                  GKLVFGSNVNR+                    EPKFQ FS
Sbjct: 242 RGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPKKEEPKFQPFS 301

Query: 179 GKRYLLKG 156
           GK+Y LKG
Sbjct: 302 GKKYSLKG 309


>gb|ABB29959.1| ubiquitin fusion-degradation protein-like [Solanum tuberosum]
          Length = 315

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 57/124 (45%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
 Frame = -1

Query: 515 VASVPSSKAPAEGQEATAEAEPKFNPFTGAGRRLDGKPLKYEXXXXXXXXXXXXSN---- 348
           VA    SKAPAE +EA AE EPKFNPFTG  RRLDGKPLK E             +    
Sbjct: 193 VAPSRPSKAPAEVEEAAAEVEPKFNPFTGGARRLDGKPLKQEPPPSSSGSXDKQVDVTNG 252

Query: 347 GKXXXXXXXXXXXXXXXXXGKLVFGSNVNRTISXXXXXXXXXXXXXXXEPKFQAFSGKRY 168
           GK                 GKLVFGSN NR                  EPKFQAFSGK+Y
Sbjct: 253 GKKFADAASSSQNSSRQSQGKLVFGSNANRA-PEKQKEPVKEEPPKKEEPKFQAFSGKKY 311

Query: 167 LLKG 156
            L+G
Sbjct: 312 SLRG 315


>emb|CAN70718.1| hypothetical protein VITISV_024234 [Vitis vinifera]
          Length = 497

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 54/124 (43%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
 Frame = -1

Query: 521 KPVASVPSSKAPAEGQEATAEAEPKFNPFTGAGRRLDGKPLKYE---XXXXXXXXXXXXS 351
           KPVA VP  KA AE QEA  E EPKFNPF G GRRLDGKP KYE               +
Sbjct: 279 KPVAPVPLGKAAAEVQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKRPVN 338

Query: 350 NGKXXXXXXXXXXXXXXXXXGKLVFGSNVNRT---ISXXXXXXXXXXXXXXXEPKFQAFS 180
            G                  GKLVFGSNVNR+                    EPKFQ FS
Sbjct: 339 RGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPKKEEPKFQPFS 398

Query: 179 GKRY 168
           GK +
Sbjct: 399 GKNF 402


>gb|ACF06576.1| ubiquitin fusion degradation protein [Elaeis guineensis]
          Length = 320

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 54/128 (42%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
 Frame = -1

Query: 521 KPVASVPSSKAPA--EGQEATAEAEPKFNPFTGAGRRLDGKPLKYE---XXXXXXXXXXX 357
           +P  S+P+SKAP   E  +A AE EPKF PFTG GRRLDGKPLK++              
Sbjct: 194 RPQPSIPTSKAPVPVEDAQAEAEVEPKFTPFTGIGRRLDGKPLKHQAPTVSSSAKGQQSE 253

Query: 356 XSNGKXXXXXXXXXXXXXXXXXGKLVFGSNVNR-TISXXXXXXXXXXXXXXXEPKFQAFS 180
            +NG                  GKLVFGSN NR +                 EPKFQAF+
Sbjct: 254 TTNG-VKKTASTSESSSSRQTKGKLVFGSNANRASKEAQVLKQTKEEPAKKEEPKFQAFT 312

Query: 179 GKRYLLKG 156
           GK+Y LKG
Sbjct: 313 GKKYSLKG 320


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