BLASTX nr result

ID: Panax21_contig00013071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013071
         (1674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319214.1| predicted protein [Populus trichocarpa] gi|2...   710   0.0  
ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus co...   638   e-180
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...   583   e-164
ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|2...   582   e-163
ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   577   e-162

>ref|XP_002319214.1| predicted protein [Populus trichocarpa] gi|222857590|gb|EEE95137.1|
            predicted protein [Populus trichocarpa]
          Length = 692

 Score =  710 bits (1833), Expect = 0.0
 Identities = 368/559 (65%), Positives = 427/559 (76%), Gaps = 3/559 (0%)
 Frame = -3

Query: 1672 RFRAAKDATDEASETETPSGI-HEPEVGNVA-TEKLDSNVITPGTEFMEMLSSALRYYMH 1499
            RFRAA+DA D+A   ET  GI  E E GN+   +KLDSNVITPGTEFM++LSSAL YY+ 
Sbjct: 118  RFRAARDAADQALSIETDGGIVPESEEGNLEQVKKLDSNVITPGTEFMDLLSSALHYYIR 177

Query: 1498 LKMNEDPGWQGIKVILSDATVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADLIML 1319
            L+M ED GW+GIKVILSDA V GEGEHKIMSYIRLQRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 178  LRMKEDLGWRGIKVILSDANVAGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 237

Query: 1318 ALATHEIHFSILREDIRKVQTNSKRVKKREDPLPFSENVDNVISRQKFQFLNIWVLRDYL 1139
            ALA+HEIHFSILRE  RK+  +S +V K      F+EN++N IS  KFQFLN+W+LR+YL
Sbjct: 238  ALASHEIHFSILRER-RKLNGDSDQVGK------FAENIENHISGMKFQFLNVWILREYL 290

Query: 1138 AQDLRIPDPTVNSDLERLIDDFVFMCLFVGNDFLPHVPSLEISEGAIDLLMFVYKKEFVQ 959
            A DLRIPD T+  DLER+IDDFVFMCLFVGNDFLPH+PSLEISEGAIDLLM VYKKEF Q
Sbjct: 291  AYDLRIPDTTLKVDLERVIDDFVFMCLFVGNDFLPHIPSLEISEGAIDLLMTVYKKEFAQ 350

Query: 958  MGGYLTNSFEVNLDRVEQFVQAVGLHENAIFRKRSEVN-KQMEIRFRRSLTNPWKERATS 782
            MGGYLTNSFE+NL RVE FVQA+G HE+AIFR+R++V+   +EIRF+R       +R  +
Sbjct: 351  MGGYLTNSFEINLIRVEHFVQALGSHESAIFRRRNQVSLNDLEIRFQRI-----SKRQQA 405

Query: 781  FRGXXXXXXXXXXXXXXXNMVDNGSSTIDKVKLGEEGYKERYYTEKFEVKTAADIEKIQR 602
            F                     + S   D +KLG+EG+KERYY EKFE K+  + + I+R
Sbjct: 406  FH-------------------SSKSLFDDGIKLGDEGWKERYYAEKFEAKSEDERDTIRR 446

Query: 601  HAVMIYIEGICWVMHYYYQGVCSWQWFYPYHYAPFASDFYGLNHLEIHFTLGKPFKPFDQ 422
            HAV  Y+EGICWVM YYY+GVCSWQWFYPYHYAPFASDFYG + LEIHFTLG+PFKPFDQ
Sbjct: 447  HAVFKYVEGICWVMRYYYEGVCSWQWFYPYHYAPFASDFYGCDQLEIHFTLGEPFKPFDQ 506

Query: 421  LMGVXXXXXXXXXXXSYRKLMTDPSSAILDFYPSDFELDMNGKRLVWQAICKLPFIDESC 242
            LM V            YRKLM D SS ILDFYP+DFELD NGKR  WQAICKLPFI+ES 
Sbjct: 507  LMAVLPAASAHALPLFYRKLMIDASSPILDFYPTDFELDNNGKRFSWQAICKLPFIEESR 566

Query: 241  LLSEITKVESTLTDEEKLRNSLGLDILFVHITHPLALKIFSFCERNKDNPKLFKAKVKKK 62
            L+SEITKVE TLTDEE+ RN LG D+L VH++HPLA+K+ S  E  KD   L  A  K K
Sbjct: 567  LVSEITKVEHTLTDEERRRNRLGYDVLCVHVSHPLAVKVISLFE-CKDQSALPTANGKLK 625

Query: 61   INPKFSDGMNGFIYITDKP 5
            I+PK S GMNG+IYI++KP
Sbjct: 626  IDPKISGGMNGYIYISEKP 644


>ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 1545

 Score =  638 bits (1645), Expect = e-180
 Identities = 338/585 (57%), Positives = 412/585 (70%), Gaps = 28/585 (4%)
 Frame = -3

Query: 1672 RFRAAKDATDEAS--------ETETPSGIHEPEVGNVATEKLDSNVITPGTEFMEMLSSA 1517
            RFRAAK+A  EA         E E  + + EP V       LDSNVITPGTEFM++LSSA
Sbjct: 118  RFRAAKEAEKEALKMKQFIELEGENSTSLKEPAV-------LDSNVITPGTEFMDLLSSA 170

Query: 1516 LRYYMHLKMNEDPGWQGIKVILSDATVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLD 1337
            LRYY+ L++N D GW+GIKVILSD+ VPGEGEHKIMSYIRLQR+LPG++PNTRHCLYGLD
Sbjct: 171  LRYYIRLRVNRDSGWRGIKVILSDSNVPGEGEHKIMSYIRLQRDLPGYDPNTRHCLYGLD 230

Query: 1336 ADLIMLALATHEIHFSILREDIRKVQTNSKRVKKRE---DPLPFSEN----------VDN 1196
            ADLIMLALATHE+HF+ILRE +   + +SKR KK +   +P   + +          ++ 
Sbjct: 231  ADLIMLALATHEVHFTILRE-VCAQKHSSKRGKKHKFVWNPQKKANSKKKKWMPVKTLEE 289

Query: 1195 VISRQKFQFLNIWVLRDYLAQDLRIPDPTVNSDLERLIDDFVFMCLFVGNDFLPHVPSLE 1016
             +SR  F+FL IW LR++L  D+RIP+  + +DLERLIDDF+FMCLFVGNDFLPH+P+LE
Sbjct: 290  YVSRLNFKFLYIWALREHLEYDMRIPNLALQTDLERLIDDFIFMCLFVGNDFLPHIPTLE 349

Query: 1015 ISEGAIDLLMFVYKKEFVQMGGYLTNSFEVNLDRVEQFVQAVGLHENAIFRKRSEVNKQM 836
            IS+GAIDLLM VY+KEF +MGGYLTNSFE++L RVE F+QAVGLH++AIFR+  +  K+ 
Sbjct: 350  ISQGAIDLLMKVYRKEFRRMGGYLTNSFELDLTRVEHFIQAVGLHDDAIFRQHIQKLKEK 409

Query: 835  EIRFRRSLTNPWKER-------ATSFRGXXXXXXXXXXXXXXXNMVDNGSSTIDKVKLGE 677
              R     +    E+       A S  G                 + + S+ ID     E
Sbjct: 410  SARKEERSSKRKLEKLLQNDPHAESISGGSSLLMEKAGGMNFDEPIHHLSAGIDTGDKEE 469

Query: 676  EGYKERYYTEKFEVKTAADIEKIQRHAVMIYIEGICWVMHYYYQGVCSWQWFYPYHYAPF 497
            + +KERYY +KF+ KT  + E I+R  V+ Y+EG+CWVM YYY+GVCSWQWFYPYHYAPF
Sbjct: 470  DDWKERYYAKKFKAKTKDEQESIRRDVVIKYMEGLCWVMRYYYEGVCSWQWFYPYHYAPF 529

Query: 496  ASDFYGLNHLEIHFTLGKPFKPFDQLMGVXXXXXXXXXXXSYRKLMTDPSSAILDFYPSD 317
            ASDFYGL+ L+I FTLG PFKP DQLMGV            YRKLMTD SS ILDFYPSD
Sbjct: 530  ASDFYGLDDLKIQFTLGVPFKPMDQLMGVLPAASAHALPMLYRKLMTDESSPILDFYPSD 589

Query: 316  FELDMNGKRLVWQAICKLPFIDESCLLSEITKVESTLTDEEKLRNSLGLDILFVHITHPL 137
            FELDMNGKR  WQAICKLPFIDES LLSEITKVE TLTD+E+ RNSLG + LFVHI+HPL
Sbjct: 590  FELDMNGKRRKWQAICKLPFIDESRLLSEITKVEHTLTDDERRRNSLGSNFLFVHISHPL 649

Query: 136  ALKIFSFCERNKDNPKLFKAKVKKKINPKFSDGMNGFIYITDKPV 2
            A  I  F ++N+D        V  KI+P+ S GMNGF+YI+D  V
Sbjct: 650  ADMIIYFFKQNRD------PNVLLKIDPELSGGMNGFVYISDNAV 688


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 964

 Score =  583 bits (1502), Expect = e-164
 Identities = 302/580 (52%), Positives = 389/580 (67%), Gaps = 25/580 (4%)
 Frame = -3

Query: 1672 RFRAAKDATDEASETETPSGIHEPEVGNVATEK-----LDSNVITPGTEFMEMLSSALRY 1508
            RFRAAKDA +  +E E      E E G + + K      DSNVITPGT+FM +LS+ L+Y
Sbjct: 119  RFRAAKDAAEAEAEEERLRKEFEAE-GKLLSPKEKPETSDSNVITPGTQFMAVLSTGLQY 177

Query: 1507 YMHLKMNEDPGWQGIKVILSDATVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADL 1328
            Y+ +++N +PGW+  KVILSDA VPGEGEHK+MSYIRLQRNL GFNPNTRHCLYGLDADL
Sbjct: 178  YVQMRLNHNPGWKYTKVILSDANVPGEGEHKVMSYIRLQRNLSGFNPNTRHCLYGLDADL 237

Query: 1327 IMLALATHEIHFSILREDIRKVQTNSK--------------RVKKREDPLPFSENVDNVI 1190
            IMLALATHEIHFSILRE +       K              R K  ++PL ++   D  I
Sbjct: 238  IMLALATHEIHFSILREMVTFPGQQEKCFSCGQTGHLAADCRGKPGDNPLDWNVEDDVPI 297

Query: 1189 SRQKFQFLNIWVLRDYLAQDLRIPDPTVNSDLERLIDDFVFMCLFVGNDFLPHVPSLEIS 1010
             ++K+QFLNIWVLR+YL  +L +P+P +  + ER++DDFVF+C FVGNDFLPH+P+LEI 
Sbjct: 298  HKKKYQFLNIWVLREYLQYELDVPNPPLEINFERILDDFVFLCFFVGNDFLPHMPTLEIR 357

Query: 1009 EGAIDLLMFVYKKEFVQMGGYLTNSFEVNLDRVEQFVQAVGLHENAIFRKRSEV------ 848
            EGAI+LLM VY++EF  MGGYLT++ EVNLDRVE F+Q+V ++E  IF+KR+ +      
Sbjct: 358  EGAINLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRIQQFLEN 417

Query: 847  NKQMEIRFRRSLTNPWKERATSFRGXXXXXXXXXXXXXXXNMVDNGSSTIDKVKLGEEGY 668
            N++M ++ RR  +   +  A                             +DKVKLGE GY
Sbjct: 418  NEEMRLKARRESSEEIQTPA-----------------------------VDKVKLGEPGY 448

Query: 667  KERYYTEKFEVKTAADIEKIQRHAVMIYIEGICWVMHYYYQGVCSWQWFYPYHYAPFASD 488
            KERYY EKF + T  +I+K++   V+ Y+EG+CWV  YYYQGVCSWQWFYPYHYAPFASD
Sbjct: 449  KERYYAEKFGLTTPDEIDKVRNDVVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASD 508

Query: 487  FYGLNHLEIHFTLGKPFKPFDQLMGVXXXXXXXXXXXSYRKLMTDPSSAILDFYPSDFEL 308
              GL  LEI F LG+PFKPFDQLMG             YRKLMTD SS I  F+P DFE+
Sbjct: 509  LKGLADLEITFFLGEPFKPFDQLMGTLPAASSNALPEEYRKLMTDSSSPISRFFPLDFEI 568

Query: 307  DMNGKRLVWQAICKLPFIDESCLLSEITKVESTLTDEEKLRNSLGLDILFVHITHPLALK 128
            DMNGKR  WQ I KLPFIDE  LL++  K+ESTLT+EE+LRNS+ LD+L+VH  HP+A +
Sbjct: 569  DMNGKRFAWQGIAKLPFIDERKLLAQTKKLESTLTEEERLRNSVMLDLLYVHPAHPMAAE 628

Query: 127  IFSFCERNKDNPKLFKAKVKKKINPKFSDGMNGFIYITDK 8
            + +  +     P+    +    I+   S GMNG+++++++
Sbjct: 629  VIAHYQGFNSLPQY--QRKPWAIDTNASAGMNGYLWLSER 666


>ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|222838231|gb|EEE76596.1|
            predicted protein [Populus trichocarpa]
          Length = 948

 Score =  582 bits (1500), Expect = e-163
 Identities = 300/581 (51%), Positives = 387/581 (66%), Gaps = 24/581 (4%)
 Frame = -3

Query: 1672 RFRAAKDATDEASETETPSGIHEPEVGNVAT----EKLDSNVITPGTEFMEMLSSALRYY 1505
            RFRAAKDA    +E E      E E   ++     E  DSNVITPGT+FM +LS AL+YY
Sbjct: 119  RFRAAKDAAQAEAEEERLRKEFEAEGVLLSVKEKPETRDSNVITPGTQFMAVLSIALQYY 178

Query: 1504 MHLKMNEDPGWQGIKVILSDATVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADLI 1325
            +  ++N +PGWQ  KVILSDA VPGEGEHKIMSYIRLQRN+PGFN NTRHCLYGLDADLI
Sbjct: 179  IQSRLNHNPGWQNTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNSNTRHCLYGLDADLI 238

Query: 1324 MLALATHEIHFSILREDIRKVQTNSK--------------RVKKREDPLPFSENVDNVIS 1187
            ML+LATHE+HFSILRE +       K              R K+ +D L ++   D  I 
Sbjct: 239  MLSLATHEVHFSILREMVIFPGQQDKCFLCGQAGHLAAECRGKQGDDALDWNVVDDTPIH 298

Query: 1186 RQKFQFLNIWVLRDYLAQDLRIPDPTVNSDLERLIDDFVFMCLFVGNDFLPHVPSLEISE 1007
            ++K+QFLNIWVLR+YL  DL IP+P    D E+++DDFVFMC FVGNDFLPH+P+LEI E
Sbjct: 299  KKKYQFLNIWVLREYLQYDLDIPNPPFAIDFEKIVDDFVFMCFFVGNDFLPHMPTLEIRE 358

Query: 1006 GAIDLLMFVYKKEFVQMGGYLTNSFEVNLDRVEQFVQAVGLHENAIFRKRSEV------N 845
            GAI+LLM +Y++EF  MGGYLT + EV LD+VE F+Q+V ++E  IF+KR+ +      N
Sbjct: 359  GAINLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKRARIQQAFENN 418

Query: 844  KQMEIRFRRSLTNPWKERATSFRGXXXXXXXXXXXXXXXNMVDNGSSTIDKVKLGEEGYK 665
            ++M+ + RR L+                              +  +  +DKVKLGE GYK
Sbjct: 419  EEMKHKARRDLSE-----------------------------EIQAPPVDKVKLGEPGYK 449

Query: 664  ERYYTEKFEVKTAADIEKIQRHAVMIYIEGICWVMHYYYQGVCSWQWFYPYHYAPFASDF 485
            ERYY EKF++    +I+K+ +  V+ Y+EG+CWV  YYYQGVCSWQWFYPYHYAPFASD 
Sbjct: 450  ERYYAEKFDLSNEEEIDKVTKDVVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDI 509

Query: 484  YGLNHLEIHFTLGKPFKPFDQLMGVXXXXXXXXXXXSYRKLMTDPSSAILDFYPSDFELD 305
              L+ +EI F LG+PFKPFDQLMG             YRKLMTDPSS I  F+PSDFE+D
Sbjct: 510  KDLDEMEITFFLGEPFKPFDQLMGTLPAASSNALPEEYRKLMTDPSSPIHQFFPSDFEID 569

Query: 304  MNGKRLVWQAICKLPFIDESCLLSEITKVESTLTDEEKLRNSLGLDILFVHITHPLALKI 125
            MNGKR  WQ I KLPFIDE  LL++  K+E TL +EE++RNS+  D+L+VH  HPL+ ++
Sbjct: 570  MNGKRFAWQGIAKLPFIDERKLLAQTKKLERTLMEEEQVRNSVMRDLLYVHPVHPLSQQV 629

Query: 124  FSFCERNKDNPKLFKAKVKKKINPKFSDGMNGFIYITDKPV 2
             S+   N   P     ++  KI+ + S GMNG+++++++ V
Sbjct: 630  ISYYHHNYRLP--VSERIALKIDTRASGGMNGYLWLSERNV 668


>ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 957

 Score =  577 bits (1488), Expect = e-162
 Identities = 307/589 (52%), Positives = 386/589 (65%), Gaps = 32/589 (5%)
 Frame = -3

Query: 1672 RFRAAKDATD-EASETETP-SGIHEPEVGNVAT-------EKLDSNVITPGTEFMEMLSS 1520
            RFRAAKDA + +A+E E     + E   G +         E  DSNVITPGT FM +LS 
Sbjct: 113  RFRAAKDAAEKDAAEAEAEIERLREEFEGEMKLLSSKDKPETYDSNVITPGTPFMGVLSV 172

Query: 1519 ALRYYMHLKMNEDPGWQGIKVILSDATVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGL 1340
            AL+YY+  ++N +PGW   KVILSD+ VPGEGEHKIM YIRLQRNLPGFNPNTRHCLYGL
Sbjct: 173  ALQYYIQTRLNYNPGWWNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGL 232

Query: 1339 DADLIMLALATHEIHFSILREDIR-----------------KVQTNSKRVKKREDPLPFS 1211
            DADLIML+LATHE+HFSILRE I                    +   K  +K ED  P  
Sbjct: 233  DADLIMLSLATHEVHFSILREVITFPGQQEKCFQCGQLGHFAAECRGKPGEKAEDWNPVD 292

Query: 1210 ENVDNVISRQKFQFLNIWVLRDYLAQDLRIPDPTVNSDLERLIDDFVFMCLFVGNDFLPH 1031
               D  I ++K+QFLNIWVLR+YL  ++ IP+P    D ER++DDFVF+C FVGNDFLPH
Sbjct: 293  ---DTPIHKKKYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGNDFLPH 349

Query: 1030 VPSLEISEGAIDLLMFVYKKEFVQMGGYLTNSFEVNLDRVEQFVQAVGLHENAIFRKR-- 857
            +P+LEI EGA++LLM +Y+KEF  MGGYLT + EV L+RVE F+Q+V +HE+ IF+KR  
Sbjct: 350  MPTLEIREGALNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFQKRVR 409

Query: 856  ----SEVNKQMEIRFRRSLTNPWKERATSFRGXXXXXXXXXXXXXXXNMVDNGSSTIDKV 689
                +E+N++M+ R R  +  P + RA                           S +DKV
Sbjct: 410  IQQATEINEEMKARARGDM--PGEPRA---------------------------SVLDKV 440

Query: 688  KLGEEGYKERYYTEKFEVKTAADIEKIQRHAVMIYIEGICWVMHYYYQGVCSWQWFYPYH 509
            KLGE GYKERYY EKF       I+KI++  V+ Y+EG+CWV  YYYQGVCSWQW+YPYH
Sbjct: 441  KLGEPGYKERYYAEKFGALDPEKIDKIKKDTVLKYVEGLCWVCRYYYQGVCSWQWYYPYH 500

Query: 508  YAPFASDFYGLNHLEIHFTLGKPFKPFDQLMGVXXXXXXXXXXXSYRKLMTDPSSAILDF 329
            YAPFASD   L  LEI F LG+PFKPFDQLMG             YR LM DPSS+IL F
Sbjct: 501  YAPFASDLKDLADLEITFFLGEPFKPFDQLMGTLPASSSSALPKKYRDLMIDPSSSILQF 560

Query: 328  YPSDFELDMNGKRLVWQAICKLPFIDESCLLSEITKVESTLTDEEKLRNSLGLDILFVHI 149
            YP+DFE+DMNGKR  WQ + KLPFIDE  LLS  +K+E+TLT+EE+LRNS  LD+L+V  
Sbjct: 561  YPADFEIDMNGKRFAWQGVAKLPFIDEKKLLSATSKLEATLTEEEQLRNSKMLDLLYVSS 620

Query: 148  THPLALKIFSFCERNKDNPKLFKAKVKKKINPKFSDGMNGFIYITDKPV 2
             H LA  I S+ + +   P     +  + I+P+ SDGMNG++++ ++ V
Sbjct: 621  AHNLAPHILSYYQYSCQLP--LHERPAQPIDPRVSDGMNGYLWLYERNV 667


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