BLASTX nr result

ID: Panax21_contig00013031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013031
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   332   3e-89
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   332   3e-89
ref|XP_002319467.1| global transcription factor group [Populus t...   325   3e-87
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   324   4e-87
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   324   4e-87

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  332 bits (850), Expect = 3e-89
 Identities = 159/177 (89%), Positives = 169/177 (95%)
 Frame = -2

Query: 533  EVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDF 354
            EVMDVVQT+GGGKRSAYDPDEIEEEQRER RKNKINMDFQNFVNRVNDLWGQPQFK  D 
Sbjct: 765  EVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFKGLDL 824

Query: 353  EFDQPLRELGFHGVPHKSSAFIVPTSTCLVELIETPFVVISLSEIEIVNLERVGLGQKNF 174
            EFDQPLRELGFHGVPHK+SAFIVPTS+CLVELIETPF+VI+LSEIEIVNLERVGLGQKNF
Sbjct: 825  EFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFLVITLSEIEIVNLERVGLGQKNF 884

Query: 173  DMAIVFKDFKRDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWKTILKTIVDD 3
            DM IVFKDFKRDV RIDSIPS+SLDGIKEWLDTTD+KYYESRLN+NW+ ILKTI +D
Sbjct: 885  DMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITED 941


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  332 bits (850), Expect = 3e-89
 Identities = 159/177 (89%), Positives = 169/177 (95%)
 Frame = -2

Query: 533  EVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDF 354
            EVMDVVQT+GGGKRSAYDPDEIEEEQRER RKNKINMDFQNFVNRVNDLWGQPQFK  D 
Sbjct: 713  EVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFKGLDL 772

Query: 353  EFDQPLRELGFHGVPHKSSAFIVPTSTCLVELIETPFVVISLSEIEIVNLERVGLGQKNF 174
            EFDQPLRELGFHGVPHK+SAFIVPTS+CLVELIETPF+VI+LSEIEIVNLERVGLGQKNF
Sbjct: 773  EFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFLVITLSEIEIVNLERVGLGQKNF 832

Query: 173  DMAIVFKDFKRDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWKTILKTIVDD 3
            DM IVFKDFKRDV RIDSIPS+SLDGIKEWLDTTD+KYYESRLN+NW+ ILKTI +D
Sbjct: 833  DMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITED 889


>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
            gi|222857843|gb|EEE95390.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1053

 Score =  325 bits (833), Expect = 3e-87
 Identities = 157/177 (88%), Positives = 167/177 (94%)
 Frame = -2

Query: 533  EVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDF 354
            EV+DVVQTIGGGKRSAYDPDEIEEEQRER RKNKINMDFQNFVNRVND+W QPQFKA D 
Sbjct: 765  EVIDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDVWSQPQFKALDL 824

Query: 353  EFDQPLRELGFHGVPHKSSAFIVPTSTCLVELIETPFVVISLSEIEIVNLERVGLGQKNF 174
            EFDQPLRELGFHGVPHK SAFIVPTS+CLVELIETP VVI+LSEIEIVNLERVGLGQKNF
Sbjct: 825  EFDQPLRELGFHGVPHKVSAFIVPTSSCLVELIETPCVVITLSEIEIVNLERVGLGQKNF 884

Query: 173  DMAIVFKDFKRDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWKTILKTIVDD 3
            DM +VFKDFKRDV RIDSIPS+SLDGIKEWL+TTD+KYYESRLN+NW+ ILKTI DD
Sbjct: 885  DMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLNTTDLKYYESRLNLNWRPILKTITDD 941


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
            [Cucumis sativus]
          Length = 1073

 Score =  324 bits (831), Expect = 4e-87
 Identities = 156/177 (88%), Positives = 166/177 (93%)
 Frame = -2

Query: 533  EVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDF 354
            EVMDVVQTIGGGKRSAYDPDEIEEEQRER RKNKINMDFQ+FVNRVNDLWGQPQF   D 
Sbjct: 771  EVMDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWGQPQFGGLDL 830

Query: 353  EFDQPLRELGFHGVPHKSSAFIVPTSTCLVELIETPFVVISLSEIEIVNLERVGLGQKNF 174
            EFDQPLRELGFHGVP+KSSAFIVPTSTCLVELIETPF+V++L EIEIVNLERVG GQKNF
Sbjct: 831  EFDQPLRELGFHGVPYKSSAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGQKNF 890

Query: 173  DMAIVFKDFKRDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWKTILKTIVDD 3
            DM IVFKDFKRDV RIDSIPS+SLDGIKEWLDTTDIKYYES+LN+NW+ ILKTI +D
Sbjct: 891  DMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTITED 947


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  324 bits (831), Expect = 4e-87
 Identities = 156/177 (88%), Positives = 166/177 (93%)
 Frame = -2

Query: 533  EVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDF 354
            EVMDVVQTIGGGKRSAYDPDEIEEEQRER RKNKINMDFQ+FVNRVNDLWGQPQF   D 
Sbjct: 771  EVMDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWGQPQFGGLDL 830

Query: 353  EFDQPLRELGFHGVPHKSSAFIVPTSTCLVELIETPFVVISLSEIEIVNLERVGLGQKNF 174
            EFDQPLRELGFHGVP+KSSAFIVPTSTCLVELIETPF+V++L EIEIVNLERVG GQKNF
Sbjct: 831  EFDQPLRELGFHGVPYKSSAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGQKNF 890

Query: 173  DMAIVFKDFKRDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWKTILKTIVDD 3
            DM IVFKDFKRDV RIDSIPS+SLDGIKEWLDTTDIKYYES+LN+NW+ ILKTI +D
Sbjct: 891  DMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTITED 947


Top