BLASTX nr result

ID: Panax21_contig00012950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00012950
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06450.1| ribosomal protein L10 [Elaeis guineensis]              158   1e-59
gb|ADR71236.1| 60S acidic ribosomal protein P0B [Hevea brasilien...   160   2e-59
gb|ADR71235.1| 60S acidic ribosomal protein P0A [Hevea brasilien...   160   2e-59
ref|XP_002526873.1| 60S acidic ribosomal protein P0, putative [R...   158   3e-59
ref|XP_002315165.1| predicted protein [Populus trichocarpa] gi|2...   160   5e-59

>gb|ACF06450.1| ribosomal protein L10 [Elaeis guineensis]
          Length = 321

 Score =  158 bits (400), Expect(2) = 1e-59
 Identities = 77/87 (88%), Positives = 84/87 (96%)
 Frame = -2

Query: 830 VGAPARVGLIAPIDVVVPPGNTGLDPSQTNFFQVLNIPTKINKGAVEIITAVDLIKKGDK 651
           VGAPARVGL+APIDVVVPPGNTGLDPSQT+FFQVLNIPTKINKG VEIIT V+LI+KGDK
Sbjct: 110 VGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDK 169

Query: 650 VGSSEAALLAKLGLRPFSYGLVVQSAY 570
           VGSSEAALLAKLG+RPFSYGLV+Q+ Y
Sbjct: 170 VGSSEAALLAKLGIRPFSYGLVIQAVY 196



 Score = 98.6 bits (244), Expect(2) = 1e-59
 Identities = 48/68 (70%), Positives = 59/68 (86%)
 Frame = -3

Query: 457 VLNLTEDDIAIKFANGVANIASLAVALSYPTIAAAPSMFSNAYKNVLALAVATEYTFKQA 278
           VL+LTEDD+  KFA GV+ + SL++ALSYPT+ AAP MF NAYKNVLA+A+ATEYTF+QA
Sbjct: 206 VLDLTEDDLVEKFAAGVSMVTSLSLALSYPTLVAAPHMFINAYKNVLAVAIATEYTFEQA 265

Query: 277 EQVKVYLK 254
           E+VK YLK
Sbjct: 266 EKVKEYLK 273


>gb|ADR71236.1| 60S acidic ribosomal protein P0B [Hevea brasiliensis]
          Length = 320

 Score =  160 bits (404), Expect(2) = 2e-59
 Identities = 80/87 (91%), Positives = 84/87 (96%)
 Frame = -2

Query: 830 VGAPARVGLIAPIDVVVPPGNTGLDPSQTNFFQVLNIPTKINKGAVEIITAVDLIKKGDK 651
           VGAPARVGL+APIDVVVPPGNTGLDPSQT+FFQVLNIPTKINKG VEIIT V+LIKKGDK
Sbjct: 110 VGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDK 169

Query: 650 VGSSEAALLAKLGLRPFSYGLVVQSAY 570
           VGSSEAALLAKLG+RPFSYGLVV SAY
Sbjct: 170 VGSSEAALLAKLGIRPFSYGLVVLSAY 196



 Score = 96.3 bits (238), Expect(2) = 2e-59
 Identities = 47/68 (69%), Positives = 58/68 (85%)
 Frame = -3

Query: 457 VLNLTEDDIAIKFANGVANIASLAVALSYPTIAAAPSMFSNAYKNVLALAVATEYTFKQA 278
           VL+LTEDD+  KFA GV+ + SLA+A+SYPT+AAAP MF NAYKNVLA+AVATEY+F +A
Sbjct: 206 VLDLTEDDLVEKFATGVSMVTSLALAISYPTLAAAPHMFVNAYKNVLAIAVATEYSFPRA 265

Query: 277 EQVKVYLK 254
           E V+ YLK
Sbjct: 266 ETVREYLK 273


>gb|ADR71235.1| 60S acidic ribosomal protein P0A [Hevea brasiliensis]
          Length = 320

 Score =  160 bits (404), Expect(2) = 2e-59
 Identities = 80/87 (91%), Positives = 84/87 (96%)
 Frame = -2

Query: 830 VGAPARVGLIAPIDVVVPPGNTGLDPSQTNFFQVLNIPTKINKGAVEIITAVDLIKKGDK 651
           VGAPARVGL+APIDVVVPPGNTGLDPSQT+FFQVLNIPTKINKG VEIIT V+LIKKGDK
Sbjct: 110 VGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDK 169

Query: 650 VGSSEAALLAKLGLRPFSYGLVVQSAY 570
           VGSSEAALLAKLG+RPFSYGLVV SAY
Sbjct: 170 VGSSEAALLAKLGIRPFSYGLVVLSAY 196



 Score = 96.3 bits (238), Expect(2) = 2e-59
 Identities = 47/68 (69%), Positives = 58/68 (85%)
 Frame = -3

Query: 457 VLNLTEDDIAIKFANGVANIASLAVALSYPTIAAAPSMFSNAYKNVLALAVATEYTFKQA 278
           VL+LTEDD+  KFA GV+ + SLA+A+SYPT+AAAP MF NAYKNVLA+AVATEY+F +A
Sbjct: 206 VLDLTEDDLVEKFATGVSMVTSLALAISYPTLAAAPHMFVNAYKNVLAIAVATEYSFPRA 265

Query: 277 EQVKVYLK 254
           E V+ YLK
Sbjct: 266 ETVREYLK 273


>ref|XP_002526873.1| 60S acidic ribosomal protein P0, putative [Ricinus communis]
           gi|223533772|gb|EEF35504.1| 60S acidic ribosomal protein
           P0, putative [Ricinus communis]
          Length = 320

 Score =  158 bits (399), Expect(3) = 3e-59
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = -2

Query: 830 VGAPARVGLIAPIDVVVPPGNTGLDPSQTNFFQVLNIPTKINKGAVEIITAVDLIKKGDK 651
           VGAPARVGL+APIDVVVPPGNTGLDPSQT+FFQVLNIPTKINKG VEIIT V+LIKKGDK
Sbjct: 110 VGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDK 169

Query: 650 VGSSEAALLAKLGLRPFSYGLVVQSAY 570
           VGSSEAALLAKLG+RPFSYGL+V S Y
Sbjct: 170 VGSSEAALLAKLGIRPFSYGLIVLSVY 196



 Score = 96.3 bits (238), Expect(3) = 3e-59
 Identities = 48/68 (70%), Positives = 58/68 (85%)
 Frame = -3

Query: 457 VLNLTEDDIAIKFANGVANIASLAVALSYPTIAAAPSMFSNAYKNVLALAVATEYTFKQA 278
           VL+LTEDD+  KFA GV+ + SLA+A+SYPT+AAAP MF NAYKN LA+AVATEYTF QA
Sbjct: 206 VLDLTEDDLIGKFAIGVSMVTSLALAISYPTLAAAPHMFINAYKNALAIAVATEYTFPQA 265

Query: 277 EQVKVYLK 254
           E+VK YL+
Sbjct: 266 EKVKEYLE 273



 Score = 22.3 bits (46), Expect(3) = 3e-59
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 215 MEDPAKFDVAVA 180
           +EDP+KF VAVA
Sbjct: 272 LEDPSKFAVAVA 283


>ref|XP_002315165.1| predicted protein [Populus trichocarpa] gi|222864205|gb|EEF01336.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  160 bits (404), Expect(2) = 5e-59
 Identities = 80/87 (91%), Positives = 84/87 (96%)
 Frame = -2

Query: 830 VGAPARVGLIAPIDVVVPPGNTGLDPSQTNFFQVLNIPTKINKGAVEIITAVDLIKKGDK 651
           VGAPARVGL+APIDVVVPPGNTGLDPSQT+FFQVLNIPTKINKG VEIIT V+LIKKGDK
Sbjct: 110 VGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDK 169

Query: 650 VGSSEAALLAKLGLRPFSYGLVVQSAY 570
           VGSSEAALLAKLG+RPFSYGLVV SAY
Sbjct: 170 VGSSEAALLAKLGIRPFSYGLVVLSAY 196



 Score = 94.7 bits (234), Expect(2) = 5e-59
 Identities = 48/68 (70%), Positives = 59/68 (86%)
 Frame = -3

Query: 457 VLNLTEDDIAIKFANGVANIASLAVALSYPTIAAAPSMFSNAYKNVLALAVATEYTFKQA 278
           VL+LTEDD+  KFA GV+ IASL++A SYPT+AAAP MF NAYKNVLA+AVATEY+F QA
Sbjct: 206 VLDLTEDDLIDKFAAGVSMIASLSLATSYPTLAAAPHMFINAYKNVLAVAVATEYSFPQA 265

Query: 277 EQVKVYLK 254
           E+VK +L+
Sbjct: 266 EKVKEFLE 273


Top