BLASTX nr result

ID: Panax21_contig00012892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00012892
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28248.3| unnamed protein product [Vitis vinifera]              262   4e-68
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...   262   4e-68
emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]   262   4e-68
ref|XP_002325199.1| predicted protein [Populus trichocarpa] gi|2...   249   5e-64
ref|XP_002531955.1| conserved hypothetical protein [Ricinus comm...   248   6e-64

>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score =  262 bits (670), Expect = 4e-68
 Identities = 136/196 (69%), Positives = 154/196 (78%)
 Frame = -2

Query: 590 FSTLDSSGQNLPRPSVIHSSNDLGRTQFDDSFPIIDLRLKLHLYKVRFLLLTRNPKAAKR 411
           FS LD  GQNL RP+ + S NDL R   D S P +DL+LKL LYKVR LLLTRN KAAKR
Sbjct: 266 FSALDIGGQNLTRPAGLPSLNDLSRAPADRSIPTVDLKLKLQLYKVRILLLTRNLKAAKR 325

Query: 410 EVKMAMNIARGKEYSMALFLKSQLEYARRNHRKAIKLLMASSNLTEMATSIMYYNNLGCI 231
           EVK AMNIARG++ SMAL LKS+LEYAR NHRKAIKLLMASSN +EM  S ++ NNLGCI
Sbjct: 326 EVKQAMNIARGRDSSMALLLKSELEYARGNHRKAIKLLMASSNQSEMGISSIFNNNLGCI 385

Query: 230 YYRLGQHQTSTVFFSKAXXXXXXLRKENPQTQTTFSQDKSLLIVYNCGVQYLACGKPKLA 51
           +Y+LG+H TST+FFSKA      L+KE     ++FSQDKSLLI+YNCGVQYLACGKP LA
Sbjct: 386 HYQLGKHHTSTIFFSKALSGSSSLKKEKTPKLSSFSQDKSLLIIYNCGVQYLACGKPILA 445

Query: 50  ARCFYKASLVFYNRAL 3
           ARCF KASLVFYN  L
Sbjct: 446 ARCFQKASLVFYNSPL 461


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score =  262 bits (670), Expect = 4e-68
 Identities = 136/196 (69%), Positives = 154/196 (78%)
 Frame = -2

Query: 590 FSTLDSSGQNLPRPSVIHSSNDLGRTQFDDSFPIIDLRLKLHLYKVRFLLLTRNPKAAKR 411
           FS LD  GQNL RP+ + S NDL R   D S P +DL+LKL LYKVR LLLTRN KAAKR
Sbjct: 283 FSALDIGGQNLTRPAGLPSLNDLSRAPADRSIPTVDLKLKLQLYKVRILLLTRNLKAAKR 342

Query: 410 EVKMAMNIARGKEYSMALFLKSQLEYARRNHRKAIKLLMASSNLTEMATSIMYYNNLGCI 231
           EVK AMNIARG++ SMAL LKS+LEYAR NHRKAIKLLMASSN +EM  S ++ NNLGCI
Sbjct: 343 EVKQAMNIARGRDSSMALLLKSELEYARGNHRKAIKLLMASSNQSEMGISSIFNNNLGCI 402

Query: 230 YYRLGQHQTSTVFFSKAXXXXXXLRKENPQTQTTFSQDKSLLIVYNCGVQYLACGKPKLA 51
           +Y+LG+H TST+FFSKA      L+KE     ++FSQDKSLLI+YNCGVQYLACGKP LA
Sbjct: 403 HYQLGKHHTSTIFFSKALSGSSSLKKEKTPKLSSFSQDKSLLIIYNCGVQYLACGKPILA 462

Query: 50  ARCFYKASLVFYNRAL 3
           ARCF KASLVFYN  L
Sbjct: 463 ARCFQKASLVFYNSPL 478


>emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]
          Length = 701

 Score =  262 bits (670), Expect = 4e-68
 Identities = 136/196 (69%), Positives = 154/196 (78%)
 Frame = -2

Query: 590 FSTLDSSGQNLPRPSVIHSSNDLGRTQFDDSFPIIDLRLKLHLYKVRFLLLTRNPKAAKR 411
           FS LD  GQNL RP+ + S NDL R   D S P +DL+LKL LYKVR LLLTRN KAAKR
Sbjct: 127 FSALDIGGQNLTRPAGLPSLNDLSRAPADRSIPTVDLKLKLQLYKVRILLLTRNLKAAKR 186

Query: 410 EVKMAMNIARGKEYSMALFLKSQLEYARRNHRKAIKLLMASSNLTEMATSIMYYNNLGCI 231
           EVK AMNIARG++ SMAL LKS+LEYAR NHRKAIKLLMASSN +EM  S ++ NNLGCI
Sbjct: 187 EVKQAMNIARGRDSSMALLLKSELEYARGNHRKAIKLLMASSNQSEMGISSIFNNNLGCI 246

Query: 230 YYRLGQHQTSTVFFSKAXXXXXXLRKENPQTQTTFSQDKSLLIVYNCGVQYLACGKPKLA 51
           +Y+LG+H TST+FFSKA      L+KE     ++FSQDKSLLI+YNCGVQYLACGKP LA
Sbjct: 247 HYQLGKHHTSTIFFSKALSGSSSLKKEKTPKLSSFSQDKSLLIIYNCGVQYLACGKPILA 306

Query: 50  ARCFYKASLVFYNRAL 3
           ARCF KASLVFYN  L
Sbjct: 307 ARCFQKASLVFYNSPL 322


>ref|XP_002325199.1| predicted protein [Populus trichocarpa] gi|222866633|gb|EEF03764.1|
           predicted protein [Populus trichocarpa]
          Length = 841

 Score =  249 bits (635), Expect = 5e-64
 Identities = 135/202 (66%), Positives = 156/202 (77%)
 Frame = -2

Query: 608 YENFFFFSTLDSSGQNLPRPSVIHSSNDLGRTQFDDSFPIIDLRLKLHLYKVRFLLLTRN 429
           YE+ F   +LD SGQNL RP  + SSNDL RT  D SF   +++LKLH+YKV+FLLLTRN
Sbjct: 288 YESMF---SLDISGQNLARPVGLSSSNDLSRTPIDRSFSPSEMKLKLHIYKVQFLLLTRN 344

Query: 428 PKAAKREVKMAMNIARGKEYSMALFLKSQLEYARRNHRKAIKLLMASSNLTEMATSIMYY 249
            K AKREVK+A+NIAR ++  MAL LKSQLEYAR N+RKAIKLLMASSN  EM  S M +
Sbjct: 345 LKQAKREVKLAINIARVRDSPMALLLKSQLEYARGNYRKAIKLLMASSNRAEMGISSM-F 403

Query: 248 NNLGCIYYRLGQHQTSTVFFSKAXXXXXXLRKENPQTQTTFSQDKSLLIVYNCGVQYLAC 69
           NNLGCIYY+LG++ T+TV FSKA      L+K+ P    TF QDKSLLIVYNCGVQ+LAC
Sbjct: 404 NNLGCIYYQLGKYHTATVLFSKALSSSSSLQKDKPWKLLTFLQDKSLLIVYNCGVQHLAC 463

Query: 68  GKPKLAARCFYKASLVFYNRAL 3
           GKP LAARCF KASLVFYNR L
Sbjct: 464 GKPLLAARCFEKASLVFYNRPL 485


>ref|XP_002531955.1| conserved hypothetical protein [Ricinus communis]
           gi|223528401|gb|EEF30437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 851

 Score =  248 bits (634), Expect = 6e-64
 Identities = 132/199 (66%), Positives = 154/199 (77%)
 Frame = -2

Query: 608 YENFFFFSTLDSSGQNLPRPSVIHSSNDLGRTQFDDSFPIIDLRLKLHLYKVRFLLLTRN 429
           YE  F   +L+ SGQNL RPS + S+NDL R Q D +   IDL+LKL LYKVRFLLLTRN
Sbjct: 299 YETMF---SLEISGQNLTRPSALSSANDLSRAQVDRTMSSIDLKLKLQLYKVRFLLLTRN 355

Query: 428 PKAAKREVKMAMNIARGKEYSMALFLKSQLEYARRNHRKAIKLLMASSNLTEMATSIMYY 249
            K AKREVK+AMNIARG++ S AL LK+QLEYAR NHRKAIKLLMASSN TEM  S M +
Sbjct: 356 LKQAKREVKLAMNIARGRDSSTALLLKAQLEYARGNHRKAIKLLMASSNRTEMGVSSM-F 414

Query: 248 NNLGCIYYRLGQHQTSTVFFSKAXXXXXXLRKENPQTQTTFSQDKSLLIVYNCGVQYLAC 69
           NNLGCIY++LG++ +S+V FSKA      LRK+ P    TFSQDKSLLI+YNCG+Q+L C
Sbjct: 415 NNLGCIYFQLGKYHSSSVLFSKALTSSSSLRKDKPLKMLTFSQDKSLLIMYNCGIQHLVC 474

Query: 68  GKPKLAARCFYKASLVFYN 12
           GKP LAAR F KASL+FYN
Sbjct: 475 GKPFLAARFFQKASLIFYN 493