BLASTX nr result

ID: Panax21_contig00012844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00012844
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520743.1| leucine rich repeat-containing protein, puta...    82   6e-14
ref|XP_002300846.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
emb|CAN73875.1| hypothetical protein VITISV_039541 [Vitis vinifera]    81   8e-14
emb|CBI32333.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002275003.1| PREDICTED: RAN GTPase-activating protein 1 i...    80   1e-13

>ref|XP_002520743.1| leucine rich repeat-containing protein, putative [Ricinus communis]
           gi|223540128|gb|EEF41705.1| leucine rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/51 (70%), Positives = 47/51 (92%)
 Frame = -3

Query: 389 RSISIKLWSPNQSTRLMLVERMTKNLATPSILSRKYGLLSKEEADKESSKL 237
           R++S+KLW PNQSTRLML+ERMTKNL TPSI+SRKYG LSKEEA++++ ++
Sbjct: 11  RTLSVKLWPPNQSTRLMLIERMTKNLTTPSIISRKYGQLSKEEAEEDAKQI 61


>ref|XP_002300846.1| predicted protein [Populus trichocarpa] gi|222842572|gb|EEE80119.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = -3

Query: 404 TAALNRSISIKLWSPNQSTRLMLVERMTKNLATPSILSRKYGLLSKEEADKESSKL 237
           T  L   IS+KLW P QSTRLMLVERMTKN  TPS +SRKYGLLSKEEA++++ K+
Sbjct: 5   TQTLQHRISVKLWPPGQSTRLMLVERMTKNFITPSFISRKYGLLSKEEAEEDAKKI 60


>emb|CAN73875.1| hypothetical protein VITISV_039541 [Vitis vinifera]
          Length = 541

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/61 (67%), Positives = 51/61 (83%), Gaps = 3/61 (4%)
 Frame = -3

Query: 410 MDTAALN---RSISIKLWSPNQSTRLMLVERMTKNLATPSILSRKYGLLSKEEADKESSK 240
           MD+ A N   R +SIKLW+P+QSTRLMLVERMTKNL TPSILSRKYGLL +EEA++ + +
Sbjct: 1   MDSTAQNFQHRKMSIKLWAPSQSTRLMLVERMTKNLTTPSILSRKYGLLMREEAEEYAKE 60

Query: 239 L 237
           +
Sbjct: 61  I 61


>emb|CBI32333.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 3/61 (4%)
 Frame = -3

Query: 410 MDTAALN---RSISIKLWSPNQSTRLMLVERMTKNLATPSILSRKYGLLSKEEADKESSK 240
           MD+ A N   R +SIKLW P+QSTRLMLVERMTKNL TPSILSRKYGLL +EEA++ + +
Sbjct: 1   MDSTAQNFQHRKMSIKLWPPSQSTRLMLVERMTKNLTTPSILSRKYGLLMREEAEEYAKE 60

Query: 239 L 237
           +
Sbjct: 61  I 61


>ref|XP_002275003.1| PREDICTED: RAN GTPase-activating protein 1 isoform 2 [Vitis
           vinifera] gi|225436922|ref|XP_002274973.1| PREDICTED:
           RAN GTPase-activating protein 1 isoform 1 [Vitis
           vinifera]
          Length = 541

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 3/61 (4%)
 Frame = -3

Query: 410 MDTAALN---RSISIKLWSPNQSTRLMLVERMTKNLATPSILSRKYGLLSKEEADKESSK 240
           MD+ A N   R +SIKLW P+QSTRLMLVERMTKNL TPSILSRKYGLL +EEA++ + +
Sbjct: 1   MDSTAQNFQHRKMSIKLWPPSQSTRLMLVERMTKNLTTPSILSRKYGLLMREEAEEYAKE 60

Query: 239 L 237
           +
Sbjct: 61  I 61


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