BLASTX nr result

ID: Panax21_contig00012493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00012493
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265199.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   129   2e-44
emb|CBI16734.3| unnamed protein product [Vitis vinifera]              129   2e-44
emb|CAN61028.1| hypothetical protein VITISV_010074 [Vitis vinifera]   129   2e-44
ref|NP_001239966.1| uncharacterized protein LOC100816956 [Glycin...   123   7e-42
gb|ACJ84140.1| unknown [Medicago truncatula] gi|388506834|gb|AFK...   119   7e-41

>ref|XP_002265199.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           assembly factor 3-like [Vitis vinifera]
          Length = 173

 Score =  129 bits (324), Expect(2) = 2e-44
 Identities = 61/68 (89%), Positives = 66/68 (97%)
 Frame = -1

Query: 424 PLPSLRRAFSLYDQINLIDNVPDDQLRFQGYTDTGFTVNGNKYEGSVLCVGNLLLSWTPK 245
           PLPSLRRAFSLYDQINLIDNVP+DQLRFQGYTDTGFTV+G +YEGS+LCVGN+LLSW PK
Sbjct: 30  PLPSLRRAFSLYDQINLIDNVPEDQLRFQGYTDTGFTVSGVQYEGSLLCVGNVLLSWGPK 89

Query: 244 KLSEITAD 221
           KLSEITAD
Sbjct: 90  KLSEITAD 97



 Score = 75.1 bits (183), Expect(2) = 2e-44
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = -3

Query: 119 EILIIGCGRHIQQVDPELRRFIRSTGMKLEAVDSRNAAS 3
           EILI+GCGRHI+QVDPELRR+I+STGMKLEAVDSRNAAS
Sbjct: 110 EILILGCGRHIEQVDPELRRYIQSTGMKLEAVDSRNAAS 148


>emb|CBI16734.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score =  129 bits (324), Expect(2) = 2e-44
 Identities = 61/68 (89%), Positives = 66/68 (97%)
 Frame = -1

Query: 424 PLPSLRRAFSLYDQINLIDNVPDDQLRFQGYTDTGFTVNGNKYEGSVLCVGNLLLSWTPK 245
           PLPSLRRAFSLYDQINLIDNVP+DQLRFQGYTDTGFTV+G +YEGS+LCVGN+LLSW PK
Sbjct: 29  PLPSLRRAFSLYDQINLIDNVPEDQLRFQGYTDTGFTVSGVQYEGSLLCVGNVLLSWGPK 88

Query: 244 KLSEITAD 221
           KLSEITAD
Sbjct: 89  KLSEITAD 96



 Score = 75.1 bits (183), Expect(2) = 2e-44
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = -3

Query: 119 EILIIGCGRHIQQVDPELRRFIRSTGMKLEAVDSRNAAS 3
           EILI+GCGRHI+QVDPELRR+I+STGMKLEAVDSRNAAS
Sbjct: 109 EILILGCGRHIEQVDPELRRYIQSTGMKLEAVDSRNAAS 147


>emb|CAN61028.1| hypothetical protein VITISV_010074 [Vitis vinifera]
          Length = 158

 Score =  129 bits (324), Expect(2) = 2e-44
 Identities = 61/68 (89%), Positives = 66/68 (97%)
 Frame = -1

Query: 424 PLPSLRRAFSLYDQINLIDNVPDDQLRFQGYTDTGFTVNGNKYEGSVLCVGNLLLSWTPK 245
           PLPSLRRAFSLYDQINLIDNVP+DQLRFQGYTDTGFTV+G +YEGS+LCVGN+LLSW PK
Sbjct: 15  PLPSLRRAFSLYDQINLIDNVPEDQLRFQGYTDTGFTVSGVQYEGSLLCVGNVLLSWGPK 74

Query: 244 KLSEITAD 221
           KLSEITAD
Sbjct: 75  KLSEITAD 82



 Score = 75.1 bits (183), Expect(2) = 2e-44
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = -3

Query: 119 EILIIGCGRHIQQVDPELRRFIRSTGMKLEAVDSRNAAS 3
           EILI+GCGRHI+QVDPELRR+I+STGMKLEAVDSRNAAS
Sbjct: 95  EILILGCGRHIEQVDPELRRYIQSTGMKLEAVDSRNAAS 133


>ref|NP_001239966.1| uncharacterized protein LOC100816956 [Glycine max]
           gi|255648257|gb|ACU24581.1| unknown [Glycine max]
          Length = 174

 Score =  123 bits (309), Expect(2) = 7e-42
 Identities = 58/67 (86%), Positives = 62/67 (92%)
 Frame = -1

Query: 421 LPSLRRAFSLYDQINLIDNVPDDQLRFQGYTDTGFTVNGNKYEGSVLCVGNLLLSWTPKK 242
           LPSLRRAFSLYDQINLID VP+DQLRFQGY DTGFTVNG +YEGS+LCVGNLL+SW PKK
Sbjct: 34  LPSLRRAFSLYDQINLIDQVPEDQLRFQGYNDTGFTVNGVEYEGSLLCVGNLLMSWKPKK 93

Query: 241 LSEITAD 221
            SEITAD
Sbjct: 94  FSEITAD 100



 Score = 72.4 bits (176), Expect(2) = 7e-42
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = -3

Query: 119 EILIIGCGRHIQQVDPELRRFIRSTGMKLEAVDSRNAAS 3
           EILIIGCG++IQ VDPELRRFIRSTG+KLEAVDSRNAAS
Sbjct: 113 EILIIGCGKNIQHVDPELRRFIRSTGIKLEAVDSRNAAS 151


>gb|ACJ84140.1| unknown [Medicago truncatula] gi|388506834|gb|AFK41483.1| unknown
           [Medicago truncatula]
          Length = 177

 Score =  119 bits (298), Expect(2) = 7e-41
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = -1

Query: 421 LPSLRRAFSLYDQINLIDNVPDDQLRFQGYTDTGFTVNGNKYEGSVLCVGNLLLSWTPKK 242
           LPSLRRAFSLYDQINLIDNVP+DQLRFQG+ DTGFTVNG +YEGS+LCVGNL++SW P K
Sbjct: 37  LPSLRRAFSLYDQINLIDNVPEDQLRFQGFKDTGFTVNGVEYEGSLLCVGNLIMSWKPTK 96

Query: 241 LSEITAD 221
            SEITA+
Sbjct: 97  FSEITAE 103



 Score = 73.2 bits (178), Expect(2) = 7e-41
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = -3

Query: 119 EILIIGCGRHIQQVDPELRRFIRSTGMKLEAVDSRNAAS 3
           EILI+GCGR+IQ VDPELR+FIRSTGMKLEAVDSRNAAS
Sbjct: 116 EILIVGCGRNIQHVDPELRQFIRSTGMKLEAVDSRNAAS 154


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