BLASTX nr result

ID: Panax21_contig00012482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00012482
         (2530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   714   0.0  
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   666   0.0  
emb|CBI38559.3| unnamed protein product [Vitis vinifera]              662   0.0  
ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago tr...   627   e-177
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...   624   e-176

>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  714 bits (1844), Expect = 0.0
 Identities = 372/553 (67%), Positives = 430/553 (77%), Gaps = 6/553 (1%)
 Frame = -1

Query: 1642 DGFEMNSYITPLRQHECSSLSESFISCGTLDEDFDDSILQEIDALCENKPEVVAGRKSWN 1463
            DGF ++S  TP++   C S+ +S +S   LD+D  +SIL+EIDALCE K       +  N
Sbjct: 89   DGFILDSSETPMKGKVCPSVGDSLMSTNILDDDLCESILEEIDALCEQKSAAKTEGQCPN 148

Query: 1462 SNMKMRSQSSEMNRDVCYTNVGPVVSEE------MVKTEGNLGPSAVQGCEEGSRTSEAT 1301
            S + M SQ    N     +N G V +E+      M++ EG+L   A Q  +  S      
Sbjct: 149  SIISMESQFRVKNGGKDSSNWGSVDAEKFLLTASMLRLEGDLNSGAEQAAQPAS------ 202

Query: 1300 QIGFMPAAYAKYMQSLNDRQREAACSDISVPLMIVAGPGSGKTSTMVGRVLMLLNEGIGP 1121
                MP  Y+KY+QSLND QREAACSDIS+PLMIVAGPGSGKTSTMVGR+LMLLNEGI P
Sbjct: 203  ----MPDEYSKYLQSLNDTQREAACSDISIPLMIVAGPGSGKTSTMVGRILMLLNEGISP 258

Query: 1120 SHILXXXXXXXXXAEMRDRIGAVAGKAIAKELMISTFHSFSLQLCRSHAEKLERTPEFLI 941
            S+IL         +EM  RI AVAGK  AKE+ +STFHSF+LQLCRSHAEKL RT EFLI
Sbjct: 259  SNILAMTFTTAAASEMSGRIAAVAGKETAKEVTVSTFHSFALQLCRSHAEKLGRTSEFLI 318

Query: 940  YGQGQQRRAIIEAVRLLENGKNGENNDLCKLDEESNGKNSPRNFKDKSKKWLKYVTQAKA 761
            YG GQQRRAIIEAVR+ E   + +NN+  K+ EESN  NSP+NFKDKSKKW K+VTQAKA
Sbjct: 319  YGHGQQRRAIIEAVRIFETENSKKNNNGSKVGEESNDINSPQNFKDKSKKWQKFVTQAKA 378

Query: 760  SGKNPEECQKMGDEIGAAILQNYGNILKSCDALDYHDLISCSVKLLTDFPEVMKECQESW 581
            SGK PEEC+ MGDEIGA+IL NY  IL++C+ALDYHDLISCSVKLL+DFPEV +ECQESW
Sbjct: 379  SGKTPEECRNMGDEIGASILGNYSKILRTCNALDYHDLISCSVKLLSDFPEVFRECQESW 438

Query: 580  KAIVIDEFQDTSAMQYGLLRILASNKQITIVGDEDQSIFSFNGADAFGFNSFRKDFPLHK 401
            KA+VIDEFQDTSAMQY LLRILAS+ +ITIVGDEDQSIFSFNGAD  GFNSFRKDFP HK
Sbjct: 439  KAVVIDEFQDTSAMQYCLLRILASHNRITIVGDEDQSIFSFNGADVSGFNSFRKDFPNHK 498

Query: 400  EIRLNKNYRSTRCIIEAASFLIRNNAKRSESKDVLTDNSSGSKITIKECCTEEAQCAFVV 221
            EIRLNKNYRSTRCI+EAAS LI+NN KR +SK VLTDNS+GS++TIKEC +EEAQCAFVV
Sbjct: 499  EIRLNKNYRSTRCILEAASSLIQNNMKRCQSKKVLTDNSTGSRVTIKECHSEEAQCAFVV 558

Query: 220  DKILEIICDGKSVNSSFGNVAVLYRRQVSGKIFQTAFRDRKIPFNVHGVAFYRKKVVRAI 41
            DKILEI  D      SFG+VA+LYRRQVSGK+FQTAFRDRKIPFN+HGVAFYRKKVVRAI
Sbjct: 559  DKILEITSDDSVAKYSFGSVAILYRRQVSGKVFQTAFRDRKIPFNIHGVAFYRKKVVRAI 618

Query: 40   ISMLRTTLPSCDD 2
            ++MLRTTL  CDD
Sbjct: 619  VAMLRTTLSGCDD 631


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  666 bits (1718), Expect = 0.0
 Identities = 366/602 (60%), Positives = 435/602 (72%), Gaps = 8/602 (1%)
 Frame = -1

Query: 1783 NRIGSSDSVSADNGTAPDLIETSIKRLDRFESGQGGLTEWENSAVAGDGFEMNSYITPLR 1604
            NR+ +  SV   +G +PD I +S           G          A +    + + TP R
Sbjct: 59   NRLNAIGSV---HGPSPDAIHSSFSARTVSVPAVGS---------ADENLCRSLFETPRR 106

Query: 1603 QHECSSLSE--SFISCGTLDEDFDDSILQEIDALCENKPEVVAGRKSWNSNMKMRSQSSE 1430
            + E S   +   F + G LD+DFDDS L++ID LCE K       +S  S+ K+ S+S+ 
Sbjct: 107  EPEGSKPKQLDCFSTTGLLDDDFDDSFLEQIDILCEQKSAEQQADRS--SDEKLSSKSNV 164

Query: 1429 MNRDVCYTNVGPVVSEEMVKTEGNLGPSAVQGCEEGSRTSEATQI------GFMPAAYAK 1268
            +  DV  ++    VSE +    GN G     G E  SR  E            MP  Y K
Sbjct: 165  VG-DVNLSSESGTVSEGI----GN-GHLLSSGIELDSREEEVDSSWRDLLNSTMPEEYLK 218

Query: 1267 YMQSLNDRQREAACSDISVPLMIVAGPGSGKTSTMVGRVLMLLNEGIGPSHILXXXXXXX 1088
            Y++SLNDRQREAAC+DIS PLMIVAGPGSGKTSTMVGRVLMLLNEGI PS+IL       
Sbjct: 219  YLKSLNDRQREAACTDISTPLMIVAGPGSGKTSTMVGRVLMLLNEGISPSNILAMTFTTA 278

Query: 1087 XXAEMRDRIGAVAGKAIAKELMISTFHSFSLQLCRSHAEKLERTPEFLIYGQGQQRRAII 908
              +EMR+RIGA+AGKA AKEL ISTFHSFSLQLCRSH EKL RT EFLIYGQGQQR AII
Sbjct: 279  AASEMRERIGAIAGKATAKELTISTFHSFSLQLCRSHGEKLGRTSEFLIYGQGQQRNAII 338

Query: 907  EAVRLLENGKNGENNDLCKLDEESNGKNSPRNFKDKSKKWLKYVTQAKASGKNPEECQKM 728
            EA+RLLE GK+   +    + E SN  N+P+ FKDK+KKW K+V QAKASG+   E +KM
Sbjct: 339  EAIRLLEIGKSENKDGALLIGELSNSLNNPKQFKDKAKKWQKFVAQAKASGRTSAEYRKM 398

Query: 727  GDEIGAAILQNYGNILKSCDALDYHDLISCSVKLLTDFPEVMKECQESWKAIVIDEFQDT 548
            G+EIGAAIL+NY NILKSC+ALDYHDLISCSVKLL+DFPEV KECQ+SWKAIVIDEFQDT
Sbjct: 399  GNEIGAAILKNYNNILKSCNALDYHDLISCSVKLLSDFPEVFKECQDSWKAIVIDEFQDT 458

Query: 547  SAMQYGLLRILASNKQITIVGDEDQSIFSFNGADAFGFNSFRKDFPLHKEIRLNKNYRST 368
            SAMQY  L++LAS+ +ITIVGD+DQSI+SFNGAD  GF SFR DFP +KEIRLNKNYRST
Sbjct: 459  SAMQYKFLKMLASHHKITIVGDDDQSIYSFNGADISGFISFRNDFPNYKEIRLNKNYRST 518

Query: 367  RCIIEAASFLIRNNAKRSESKDVLTDNSSGSKITIKECCTEEAQCAFVVDKILEIICDGK 188
            RCI+EAAS LI+NN+KR + K+VLTDNSSGSKI +KEC  E+AQCAFVVDKI+EI  +  
Sbjct: 519  RCIVEAASSLIQNNSKRCQLKNVLTDNSSGSKIVMKECHNEDAQCAFVVDKIIEISSNYS 578

Query: 187  SVNSSFGNVAVLYRRQVSGKIFQTAFRDRKIPFNVHGVAFYRKKVVRAIISMLRTTLPSC 8
            + N  +GN+A+LYRRQ+SGK FQ AFRDRKIPFN+HGVAFYRKKVVR I++MLRT LP C
Sbjct: 579  AANCCYGNIAILYRRQISGKAFQMAFRDRKIPFNIHGVAFYRKKVVRTIMAMLRTALPGC 638

Query: 7    DD 2
            DD
Sbjct: 639  DD 640


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  662 bits (1708), Expect = 0.0
 Identities = 331/429 (77%), Positives = 370/429 (86%)
 Frame = -1

Query: 1288 MPAAYAKYMQSLNDRQREAACSDISVPLMIVAGPGSGKTSTMVGRVLMLLNEGIGPSHIL 1109
            MP  Y+KY+QSLND QREAACSDIS+PLMIVAGPGSGKTSTMVGR+LMLLNEGI PS+IL
Sbjct: 1    MPDEYSKYLQSLNDTQREAACSDISIPLMIVAGPGSGKTSTMVGRILMLLNEGISPSNIL 60

Query: 1108 XXXXXXXXXAEMRDRIGAVAGKAIAKELMISTFHSFSLQLCRSHAEKLERTPEFLIYGQG 929
                     +EM  RI AVAGK  AKE+ +STFHSF+LQLCRSHAEKL RT EFLIYG G
Sbjct: 61   AMTFTTAAASEMSGRIAAVAGKETAKEVTVSTFHSFALQLCRSHAEKLGRTSEFLIYGHG 120

Query: 928  QQRRAIIEAVRLLENGKNGENNDLCKLDEESNGKNSPRNFKDKSKKWLKYVTQAKASGKN 749
            QQRRAIIEAVR+ E   + +NN+  K+ EESN  NSP+NFKDKSKKW K+VTQAKASGK 
Sbjct: 121  QQRRAIIEAVRIFETENSKKNNNGSKVGEESNDINSPQNFKDKSKKWQKFVTQAKASGKT 180

Query: 748  PEECQKMGDEIGAAILQNYGNILKSCDALDYHDLISCSVKLLTDFPEVMKECQESWKAIV 569
            PEEC+ MGDEIGA+IL NY  IL++C+ALDYHDLISCSVKLL+DFPEV +ECQESWKA+V
Sbjct: 181  PEECRNMGDEIGASILGNYSKILRTCNALDYHDLISCSVKLLSDFPEVFRECQESWKAVV 240

Query: 568  IDEFQDTSAMQYGLLRILASNKQITIVGDEDQSIFSFNGADAFGFNSFRKDFPLHKEIRL 389
            IDEFQDTSAMQY LLRILAS+ +ITIVGDEDQSIFSFNGAD  GFNSFRKDFP HKEIRL
Sbjct: 241  IDEFQDTSAMQYCLLRILASHNRITIVGDEDQSIFSFNGADVSGFNSFRKDFPNHKEIRL 300

Query: 388  NKNYRSTRCIIEAASFLIRNNAKRSESKDVLTDNSSGSKITIKECCTEEAQCAFVVDKIL 209
            NKNYRSTRCI+EAAS LI+NN KR +SK VLTDNS+GS++TIKEC +EEAQCAFVVDKIL
Sbjct: 301  NKNYRSTRCILEAASSLIQNNMKRCQSKKVLTDNSTGSRVTIKECHSEEAQCAFVVDKIL 360

Query: 208  EIICDGKSVNSSFGNVAVLYRRQVSGKIFQTAFRDRKIPFNVHGVAFYRKKVVRAIISML 29
            EI  D      SFG+VA+LYRRQVSGK+FQTAFRDRKIPFN+HGVAFYRKKVVRAI++ML
Sbjct: 361  EITSDDSVAKYSFGSVAILYRRQVSGKVFQTAFRDRKIPFNIHGVAFYRKKVVRAIVAML 420

Query: 28   RTTLPSCDD 2
            RTTL  CDD
Sbjct: 421  RTTLSGCDD 429


>ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
            gi|355479755|gb|AES60958.1| ATP-dependent DNA helicase
            pcrA [Medicago truncatula]
          Length = 906

 Score =  627 bits (1617), Expect = e-177
 Identities = 359/633 (56%), Positives = 438/633 (69%), Gaps = 25/633 (3%)
 Frame = -1

Query: 1825 LECTGSSCSKGFA--GNRIGSSD-----SVSADNGTAPDLIETSIKRLDRFESGQGGLTE 1667
            +E  G SC +  +  GN +G+ D     +VS D G   DL E+ ++++D     +    E
Sbjct: 156  VEGLGHSCHEKVSSEGNVVGNVDMGLGTNVSKDIGN-DDLNESILEQIDILFEQKSAEKE 214

Query: 1666 WENSAVAGDGFEMN---------SYITPLRQHECSSLSESFISCGTLDEDFDDSILQEID 1514
                  AG G E N         S ++ +     +S     I  G +D DFD+SIL++ID
Sbjct: 215  ------AGMGIEHNCRERVSSESSVVSNVDMDLGTSAFPKDIGNGEID-DFDESILEQID 267

Query: 1513 ALCENKPEVVAGRKSWNSNMKMRSQSSEMNRDVCYTNVGPVVSEEMVKTEG-NLGPSAVQ 1337
             LCE K  V A  +  + + +  + SSE    VC  ++    S     +EG   G     
Sbjct: 268  ILCEQKSAVKAAGQGLDQSCQ-ENVSSESGL-VCTVDMSLATS---AVSEGIGSGDMLCF 322

Query: 1336 GCE--------EGSRTSEATQIGFMPAAYAKYMQSLNDRQREAACSDISVPLMIVAGPGS 1181
            G +        +   T ++   G MP  Y+KY++SLN+RQREAAC+D+S PLMIVAGPGS
Sbjct: 323  GIDLDHKEEHVDSETTRKSLPSGTMPEEYSKYLKSLNERQREAACTDVSTPLMIVAGPGS 382

Query: 1180 GKTSTMVGRVLMLLNEGIGPSHILXXXXXXXXXAEMRDRIGAVAGKAIAKELMISTFHSF 1001
            GKTSTMVGRVLMLLNEGI P +IL         AEMR RIGA+AGK  AKEL ISTFHSF
Sbjct: 383  GKTSTMVGRVLMLLNEGISPLNILAMTFTAAAAAEMRKRIGAIAGKQTAKELTISTFHSF 442

Query: 1000 SLQLCRSHAEKLERTPEFLIYGQGQQRRAIIEAVRLLENGKNGENNDLCKLDEESNGKNS 821
             LQLCRSHAEKL RT EFLIYGQ QQR AIIEA RLLEN  +   N    + E S+G  +
Sbjct: 443  CLQLCRSHAEKLGRTSEFLIYGQWQQRNAIIEATRLLENETSKHKNGELLIGEASDGLKT 502

Query: 820  PRNFKDKSKKWLKYVTQAKASGKNPEECQKMGDEIGAAILQNYGNILKSCDALDYHDLIS 641
            P+ FKDK+KKW  +VTQAKASG+   E + MG++IGA IL+NY NILKSC+A+DYHDLIS
Sbjct: 503  PKQFKDKAKKWQNFVTQAKASGRTSAEYRDMGNQIGAEILENYSNILKSCNAVDYHDLIS 562

Query: 640  CSVKLLTDFPEVMKECQESWKAIVIDEFQDTSAMQYGLLRILASNKQITIVGDEDQSIFS 461
             SVKLLTDFPEV +E Q+SWKA+VIDEFQDTSAMQY LLRILAS+ +ITI+GD+DQSIFS
Sbjct: 563  YSVKLLTDFPEVFRESQDSWKAVVIDEFQDTSAMQYKLLRILASHNKITIIGDDDQSIFS 622

Query: 460  FNGADAFGFNSFRKDFPLHKEIRLNKNYRSTRCIIEAASFLIRNNAKRSESKDVLTDNSS 281
            FNGAD  GF SFR DFP +KEIRLNKNYRSTR I+EAA+ LI+NNAKR + K+VLTDNSS
Sbjct: 623  FNGADISGFISFRNDFPNYKEIRLNKNYRSTRYIVEAAASLIQNNAKRCQLKNVLTDNSS 682

Query: 280  GSKITIKECCTEEAQCAFVVDKILEIICDGKSVNSSFGNVAVLYRRQVSGKIFQTAFRDR 101
            GSKI +KEC  E+AQCAF+VDKI EI  +  + N S+GN+A+LYRR+VSGK FQ AFRDR
Sbjct: 683  GSKIIMKECHNEDAQCAFIVDKISEISSNHSADNCSYGNIAILYRRRVSGKAFQMAFRDR 742

Query: 100  KIPFNVHGVAFYRKKVVRAIISMLRTTLPSCDD 2
            KIPFN+HGVAFYRKKVV+ IISML+T LP CDD
Sbjct: 743  KIPFNIHGVAFYRKKVVKTIISMLQTALPGCDD 775


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
            gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
            pcrA, putative [Ricinus communis]
          Length = 1089

 Score =  624 bits (1610), Expect = e-176
 Identities = 337/545 (61%), Positives = 401/545 (73%), Gaps = 2/545 (0%)
 Frame = -1

Query: 1630 MNSYITPLRQH-ECSSLSESFISCGTLDEDFDDSILQEIDALCENKPEVVAGRKSWNSNM 1454
            ++S ITP++QH EC  LS++  +   LD+DFD+SIL+EIDA+C+         + +NS+ 
Sbjct: 94   LDSVITPIKQHPECWGLSDNLSTPTLLDDDFDESILKEIDAICDQSSAAKVETQRFNSSS 153

Query: 1453 KMRSQSSEMNRDVCYTNVGPVVSEEMVKTEGNLGPSAVQGCEEGSRTSEATQIGFMPAAY 1274
                +S E   D  +T +  + + E ++T+G L P       E   TS+  + G MP  Y
Sbjct: 154  FSVDKSEENTSD--FTTLLSIAASEDIRTQGTLEPRL-----EDKDTSQTVKHGNMPEEY 206

Query: 1273 AKYMQSLNDRQREAACSDISVPLMIVAGPGSGKTSTMVGRVLMLLNEGIGPSHILXXXXX 1094
            +KY+QSLN+RQREAAC+ IS+PLMIVAGPGSGK              GIGP++IL     
Sbjct: 207  SKYLQSLNNRQREAACTHISIPLMIVAGPGSGK--------------GIGPTNILAMTFT 252

Query: 1093 XXXXAEMRDRIGAVAGKAIAKELMISTFHSFSLQLCRSHAEKLERTPEFLIYGQGQQRRA 914
                +EMRDRIG VAGKAIAKEL ISTFHSFSLQLCRSHAEKLERT EFLIYG G QRRA
Sbjct: 253  TSAASEMRDRIGGVAGKAIAKELTISTFHSFSLQLCRSHAEKLERTSEFLIYGHGHQRRA 312

Query: 913  IIEAVRLLENGKNG-ENNDLCKLDEESNGKNSPRNFKDKSKKWLKYVTQAKASGKNPEEC 737
            IIEAVRLLE  K   ++   CK  E  NG             W   + QAKASGK P + 
Sbjct: 313  IIEAVRLLEKEKTDVQSLHACKPAEALNGIILIY--------WCA-LFQAKASGKTPADY 363

Query: 736  QKMGDEIGAAILQNYGNILKSCDALDYHDLISCSVKLLTDFPEVMKECQESWKAIVIDEF 557
            QKMGDEIGA+IL NY +ILKSC+ALDYHDLISCSVKLLTD+P+V KECQ+SWKAIV+DEF
Sbjct: 364  QKMGDEIGASILGNYNDILKSCNALDYHDLISCSVKLLTDYPDVFKECQDSWKAIVVDEF 423

Query: 556  QDTSAMQYGLLRILASNKQITIVGDEDQSIFSFNGADAFGFNSFRKDFPLHKEIRLNKNY 377
            QDTS MQY LLR+LAS+  ITIVGD+DQSIFSFNGAD  GF+SFR DFP ++EIRLNKNY
Sbjct: 424  QDTSGMQYRLLRLLASHNHITIVGDDDQSIFSFNGADISGFDSFRLDFPNYREIRLNKNY 483

Query: 376  RSTRCIIEAASFLIRNNAKRSESKDVLTDNSSGSKITIKECCTEEAQCAFVVDKILEIIC 197
            RSTR I+EAAS LI+NN KR   KDV+TDNSSGSKITIKEC TE AQC+FV+DKILE+  
Sbjct: 484  RSTRHIVEAASSLIQNNMKRCRFKDVVTDNSSGSKITIKECQTEHAQCSFVLDKILEMAS 543

Query: 196  DGKSVNSSFGNVAVLYRRQVSGKIFQTAFRDRKIPFNVHGVAFYRKKVVRAIISMLRTTL 17
            DG     ++GN+A+LYRRQVSGK+FQ AFRDRK+PFNVHGVAFYRKKVV+AII+MLRT L
Sbjct: 544  DGSPAKQNYGNIAILYRRQVSGKLFQVAFRDRKMPFNVHGVAFYRKKVVKAIIAMLRTAL 603

Query: 16   PSCDD 2
            P CDD
Sbjct: 604  PKCDD 608


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