BLASTX nr result

ID: Panax21_contig00012183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00012183
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94731.1| unknown [Populus trichocarpa]                          175   3e-41
ref|XP_002326894.1| NAC domain protein, IPR003441 [Populus trich...   173   1e-40
emb|CBI19647.3| unnamed protein product [Vitis vinifera]              164   5e-38
ref|XP_002283395.1| PREDICTED: uncharacterized protein LOC100252...   164   5e-38
ref|XP_002510344.1| conserved hypothetical protein [Ricinus comm...   162   2e-37

>gb|ABK94731.1| unknown [Populus trichocarpa]
          Length = 415

 Score =  175 bits (443), Expect = 3e-41
 Identities = 110/297 (37%), Positives = 147/297 (49%), Gaps = 23/297 (7%)
 Frame = +3

Query: 51  TMCPPAPSSLISXXXXXXXXXXXXXXXXXHGYPSYPLPNNVIADLNPFNYPPSNLPDGLV 230
           TMCPPA S +                         PLP NVI D+NP+ Y PSNLP+ + 
Sbjct: 30  TMCPPASSPVADIDFHCRDEELFMFLYKLTS--GSPLPGNVITDVNPYIYAPSNLPEDIW 87

Query: 231 YFLRSEVKKDTKLGSWKAKGEPCEIFINSVITGWRTTLEFHEGQAPNDQKTDWVMQEYRI 410
           Y LR +   DT LG WK KGE C++F NS ITGWRTT EF EGQ P+++KTDW+MQEY I
Sbjct: 88  YLLRVKENDDTGLGFWKVKGEACKLFSNSAITGWRTTFEFFEGQVPHERKTDWLMQEYWI 147

Query: 411 TQKGLCNNRNTKDSGSLYRLFNSEECIPDH----VVHPKNGGALPTDSSTGQGS------ 560
           TQK     R  K++ SL R+F   E   DH    +  P +   +    S G G+      
Sbjct: 148 TQKEHIEKRKAKEARSLCRVFLGGEQALDHENQLIASPHSDTHIDLTQSIGPGTLADTSH 207

Query: 561 -TNEAQKKNGDVEIRSLTAAER-----------LSCVLQGDFLEXXXXXXXXXXXXXXXX 704
            ++   + N D E  ++ A  R           + C  +GD+LE                
Sbjct: 208 GSSSNPEVNKDDETENMVATGRPPNLPVANLPEIDCFSRGDYLELLDLDNPASRSSSSDN 267

Query: 705 XXXXXXXXXELFDSLALLRDLEDKNIERQA-KDASFKCAVSTSVIPNEVVICPATLG 872
                    E FDS+ALLRDLE ++ +  A KD   K +V+ S+ P+EVV+ PA+ G
Sbjct: 268 SSCMTMSSDEYFDSIALLRDLESESNQALAQKDKDCKLSVAASLRPDEVVVLPASHG 324


>ref|XP_002326894.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222835209|gb|EEE73644.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 385

 Score =  173 bits (438), Expect = 1e-40
 Identities = 103/262 (39%), Positives = 139/262 (53%), Gaps = 23/262 (8%)
 Frame = +3

Query: 156 PLPNNVIADLNPFNYPPSNLPDGLVYFLRSEVKKDTKLGSWKAKGEPCEIFINSVITGWR 335
           PLP NVI D+NP+ Y PSNLP+ + Y LR +   DT LG WK KGE C++F NS ITGWR
Sbjct: 33  PLPGNVITDVNPYIYAPSNLPEDIWYLLRVKENDDTGLGFWKVKGEACKLFSNSAITGWR 92

Query: 336 TTLEFHEGQAPNDQKTDWVMQEYRITQKGLCNNRNTKDSGSLYRLFNSEECIPDH----V 503
           TT EF EGQ P+++KTDW+MQEY ITQK     R  K++ SL R+F   E   DH    +
Sbjct: 93  TTFEFFEGQVPHERKTDWLMQEYWITQKEHIEKRKAKEARSLCRVFLGGEQALDHENQLI 152

Query: 504 VHPKNGGALPTDSSTGQGS-------TNEAQKKNGDVEIRSLTAAER-----------LS 629
             P +   +    S G G+       ++   + N D E  ++ A  R           + 
Sbjct: 153 ASPHSDTHIDLTQSIGPGTLADTSHGSSSNPEVNKDDETENMVATGRPPNLPVANLPEID 212

Query: 630 CVLQGDFLEXXXXXXXXXXXXXXXXXXXXXXXXXELFDSLALLRDLEDKNIERQA-KDAS 806
           C  +GD+LE                         E FDS+ALLRDLE ++ +  A KD  
Sbjct: 213 CFSRGDYLELLDLDNPASRSSSSDNSSCMTMSSDEYFDSIALLRDLESESNQALAQKDKD 272

Query: 807 FKCAVSTSVIPNEVVICPATLG 872
            K +V+ S+ P+EVV+ PA+ G
Sbjct: 273 CKLSVAASLRPDEVVVLPASHG 294


>emb|CBI19647.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  164 bits (415), Expect = 5e-38
 Identities = 110/276 (39%), Positives = 141/276 (51%), Gaps = 28/276 (10%)
 Frame = +3

Query: 156 PLPNNVIADLNPFNYPPSNLPDGLVYFLRSEVKKDTKL--GSWKAKGEPCEIFINSVITG 329
           PLP+NV+ ++NP+ + PS L D   Y   SE   DTK   G WK KGEP EIF NS ITG
Sbjct: 6   PLPDNVMIEVNPYQHNPSCLSDRFWYLTSSE---DTKFAEGFWKPKGEPYEIFSNSSITG 62

Query: 330 WRTTLEFHEGQAPNDQKTDWVMQEYRITQKGLCNNRNTKDSGSLYRLFNSEECIPDHVVH 509
           WRTT EF+EG  P+  KTDWV+Q+Y+ITQKG   N     S SL R+F S      H + 
Sbjct: 63  WRTTFEFYEGTTPHVLKTDWVLQQYKITQKGQSKNIKPMASSSLCRVFQSRGQSSSHEMQ 122

Query: 510 PKNGGA---------------LPTDSSTGQGSTNEAQKKNGDVEIRSLTAAER------- 623
            + G A                 TD+STGQGS +E+Q ++G+ E   L A ER       
Sbjct: 123 KELGVANVADENHTCSKPSVVSNTDNSTGQGSKSESQVQHGNGETGLLAAPERSLNHPVD 182

Query: 624 ----LSCVLQGDFLEXXXXXXXXXXXXXXXXXXXXXXXXXELFDSLALLRDLEDKNIERQ 791
               +     GDFLE                         E FDSLALLRDLE       
Sbjct: 183 NLPEIDYFSDGDFLELGDLADPVSPSSSSDNSSCLSQTSDECFDSLALLRDLECD----- 237

Query: 792 AKDASFKCAVSTSVIPNEVVICPATLGKLSAEDIQK 899
            KD   K +V+  V+P++VV+ PA+ G L+ +D +K
Sbjct: 238 -KDVGCKFSVAALVMPDKVVLQPASSGSLTCDDRRK 272


>ref|XP_002283395.1| PREDICTED: uncharacterized protein LOC100252228 [Vitis vinifera]
          Length = 383

 Score =  164 bits (415), Expect = 5e-38
 Identities = 110/276 (39%), Positives = 141/276 (51%), Gaps = 28/276 (10%)
 Frame = +3

Query: 156 PLPNNVIADLNPFNYPPSNLPDGLVYFLRSEVKKDTKL--GSWKAKGEPCEIFINSVITG 329
           PLP+NV+ ++NP+ + PS L D   Y   SE   DTK   G WK KGEP EIF NS ITG
Sbjct: 34  PLPDNVMIEVNPYQHNPSCLSDRFWYLTSSE---DTKFAEGFWKPKGEPYEIFSNSSITG 90

Query: 330 WRTTLEFHEGQAPNDQKTDWVMQEYRITQKGLCNNRNTKDSGSLYRLFNSEECIPDHVVH 509
           WRTT EF+EG  P+  KTDWV+Q+Y+ITQKG   N     S SL R+F S      H + 
Sbjct: 91  WRTTFEFYEGTTPHVLKTDWVLQQYKITQKGQSKNIKPMASSSLCRVFQSRGQSSSHEMQ 150

Query: 510 PKNGGA---------------LPTDSSTGQGSTNEAQKKNGDVEIRSLTAAER------- 623
            + G A                 TD+STGQGS +E+Q ++G+ E   L A ER       
Sbjct: 151 KELGVANVADENHTCSKPSVVSNTDNSTGQGSKSESQVQHGNGETGLLAAPERSLNHPVD 210

Query: 624 ----LSCVLQGDFLEXXXXXXXXXXXXXXXXXXXXXXXXXELFDSLALLRDLEDKNIERQ 791
               +     GDFLE                         E FDSLALLRDLE       
Sbjct: 211 NLPEIDYFSDGDFLELGDLADPVSPSSSSDNSSCLSQTSDECFDSLALLRDLECD----- 265

Query: 792 AKDASFKCAVSTSVIPNEVVICPATLGKLSAEDIQK 899
            KD   K +V+  V+P++VV+ PA+ G L+ +D +K
Sbjct: 266 -KDVGCKFSVAALVMPDKVVLQPASSGSLTCDDRRK 300


>ref|XP_002510344.1| conserved hypothetical protein [Ricinus communis]
           gi|223551045|gb|EEF52531.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 388

 Score =  162 bits (410), Expect = 2e-37
 Identities = 103/273 (37%), Positives = 143/273 (52%), Gaps = 27/273 (9%)
 Frame = +3

Query: 153 YPLPNNVIADLNPFNYPPSNLPDGLVYFLRSEVKKDTKLGSWKAKGEPCEIFINSVITGW 332
           YPLPNNVI D+NP+NY PS LP G+ Y +RS+    T LG WK KGE  ++F  S ITGW
Sbjct: 31  YPLPNNVITDVNPYNYSPSYLPQGIWYLIRSKENGATDLGFWKVKGEASKLFSTSYITGW 90

Query: 333 RTTLEFHEGQAPNDQKTDWVMQEYRITQKGLCNNRNTKDSGSLYRLFNSEE--------- 485
            TTLEF EGQ P ++KT+W MQEY ITQKG   N   K++ SL R+F   E         
Sbjct: 91  MTTLEFFEGQVPRERKTNWQMQEYWITQKGPGENSKKKETSSLCRVFLGGEQGLDYQKRQ 150

Query: 486 -----CIPDH-VVHPKNGGALPTDSSTGQGSTNE-AQKKNGDVEIRSLTA---------A 617
                 I DH +VH      L  ++ T  GST++    K+ +  + ++T           
Sbjct: 151 EMASLHIADHTLVHSTESIVLKANNGTSNGSTSKHVVDKDDETGVVAVTGEPPNYLVENQ 210

Query: 618 ERLSCVLQGDFLEXXXXXXXXXXXXXXXXXXXXXXXXXELFDSLALLRDLE-DKNIERQA 794
             +    +GD+LE                         E FDSLALLR+L+ + N +   
Sbjct: 211 PEIDYFPRGDYLELLDLDNPASPSSSSDNSSCLTMSSDEYFDSLALLRELDSESNQDLVQ 270

Query: 795 KDASFKCAVSTSVIPNEVVICPAT-LGKLSAED 890
           K+ + K ++S S  PNEV++ PA+ +G LS+ +
Sbjct: 271 KNENCKFSISVSFKPNEVLMVPASPVGSLSSNE 303


Top